RNA–Protein interactions for RNA: ENST00000261367.11

SNCAIP-201, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-201ENST00000261367 TEX29Q8N6K0 151 aa7.29□□□□□ -1.24
SNCAIP-201ENST00000261367 TMEM116Q8NCL8 245 aa7.29□□□□□ -1.24
SNCAIP-201ENST00000261367 BAHD1Q8TBE0 780 aaPredicted RBP7.29□□□□□ -1.24
SNCAIP-201ENST00000261367 SPACA5Q96QH8 159 aa7.29□□□□□ -1.24
SNCAIP-201ENST00000261367 A0A1B0GW15 77 aa7.29□□□□□ -1.24
SNCAIP-201ENST00000261367 DHHO43323 396 aa7.29□□□□□ -1.24
SNCAIP-201ENST00000261367 NPY1RP25929 384 aa7.29□□□□□ -1.24
SNCAIP-201ENST00000261367 KIR3DL2P43630 455 aa7.29□□□□□ -1.24
SNCAIP-201ENST00000261367 DUSP3P51452 185 aaPredicted RBP7.29□□□□□ -1.24
SNCAIP-201ENST00000261367 FOXK1P85037 733 aa7.29□□□□□ -1.24
SNCAIP-201ENST00000261367 PAX2Q02962 417 aa7.29□□□□□ -1.24
SNCAIP-201ENST00000261367 LYSMD4Q5XG99 296 aa7.29□□□□□ -1.24
SNCAIP-201ENST00000261367 RFLNAQ6ZTI6 216 aa7.29□□□□□ -1.24
SNCAIP-201ENST00000261367 NR2C2APQ86WQ0 139 aa7.29□□□□□ -1.24
SNCAIP-201ENST00000261367 KLHDC9Q8NEP7 349 aa7.29□□□□□ -1.24
SNCAIP-201ENST00000261367 GPBAR1Q8TDU6 330 aa7.29□□□□□ -1.24
SNCAIP-201ENST00000261367 AGMATQ9BSE5 352 aa7.29□□□□□ -1.24
SNCAIP-201ENST00000261367 UBTD1Q9HAC8 227 aa7.29□□□□□ -1.24
SNCAIP-201ENST00000261367 KLF7O75840 302 aaPredicted RBP7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 KLKB1P03952 638 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 GPR183P32249 361 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 CAMPP49913 170 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 PRRX1P54821 245 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 NANOS3P60323 173 aaKnown RBP7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 FAM53BQ14153 422 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 TMEM187Q14656 261 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 TBC1D28Q2M2D7 210 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 LINC01559Q495D7 138 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 ZNF664Q8N3J9 261 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 KCNE4Q8WWG9 221 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 SPSB4Q96A44 273 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 COMMD5Q9GZQ3 224 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 ZNF835Q9Y2P0 537 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 COX11Q9Y6N1 276 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 DRD1P21728 446 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 MAS1LP35410 378 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 IBA57Q5T440 356 aaKnown RBP7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 PDPNQ86YL7 162 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 MMD2Q8IY49 270 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 MYOZ3Q8TDC0 251 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 TSACCQ96A04 125 aaPredicted RBP7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 BOKQ9UMX3 212 aaPredicted RBP7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 INSL6Q9Y581 213 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 MRPS18BQ9Y676 258 aaKnown RBP7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 FAM221AA4D161 298 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 PIN1P1O15428 100 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 LYL1P12980 280 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 SRIP30626 198 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 CLDN18P56856 261 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 ICAM4Q14773 271 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 TCTN1Q2MV58 587 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 C1orf185Q5T7R7 199 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 ZNF324BQ6AW86 544 aaPredicted RBP7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 ATG4DQ86TL0 474 aaPredicted RBP7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 C16orf52Q8NHV5 167 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 APOBEC3DQ96AK3 386 aaPredicted RBP7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 FBLN5Q9UBX5 448 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 KLHDC2Q9Y2U9 406 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 RPL36A-HNRNPH2H7BZ11 118 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 HSPB6O14558 160 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 UPK3AO75631 287 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 MDKP21741 143 aaPredicted RBP7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 RND2P52198 227 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 OCIAD2Q56VL3 154 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 PQLC2Q6ZP29 291 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 NLRC5Q86WI3 1866 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 LILRA3Q8N6C8 439 aaPredicted RBP7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 OR10G3Q8NGC4 313 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 AAMDCQ9H7C9 122 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 CHTOPQ9Y3Y2 248 aaKnown RBP7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 PTPRDP23468 1912 aa7.28□□□□□ -1.24
SNCAIP-201ENST00000261367 PLPP3O14495 311 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 HS3ST1O14792 307 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 NDUFB4O95168 129 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 GZMBP10144 247 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 PGFP49763 221 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 UBE2L3P68036 154 aaKnown RBP7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 ANKRD37Q7Z713 158 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 KMT5CQ86Y97 462 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 OR1F12Q8NHA8 337 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 RAB37Q96AX2 223 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 GNB1LQ9BYB4 327 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 TAAR3PQ9P1P4 343 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 RABAC1Q9UI14 185 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 ERRFI1Q9UJM3 462 aaPredicted RBP7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 WDR87Q6ZQQ6 2873 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 CHD7Q9P2D1 2997 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 K7N7A8 449 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 IL4P05112 153 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 MFAP2P55001 183 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 PRICKLE4Q2TBC4 344 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 DEFB110Q30KQ9 67 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 ACSF3Q4G176 576 aaPredicted RBP7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 ACTL10Q5JWF8 245 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 OR9G4Q8NGQ1 327 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 ASB10Q8WXI3 467 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 SPSB2Q99619 263 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 RNF126Q9BV68 326 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 LHX9Q9NQ69 397 aa7.27□□□□□ -1.25
SNCAIP-201ENST00000261367 PATJQ8NI35 1801 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms