RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 TRDV1A0A1B0GX56 115 aa18.3■□□□□ 0.52
LSM4-201ENST00000252816 SH2D7A6NKC9 451 aaPredicted RBP18.3■□□□□ 0.52
LSM4-201ENST00000252816 CCRL2O00421 344 aa18.3■□□□□ 0.52
LSM4-201ENST00000252816 SOCS1O15524 211 aa18.3■□□□□ 0.52
LSM4-201ENST00000252816 VDAC2P45880 294 aaPredicted RBP18.3■□□□□ 0.52
LSM4-201ENST00000252816 TMEM30BQ3MIR4 351 aa18.3■□□□□ 0.52
LSM4-201ENST00000252816 ABCA11PQ4W5N1 156 aa18.3■□□□□ 0.52
LSM4-201ENST00000252816 CT45A1Q5HYN5 189 aa18.3■□□□□ 0.52
LSM4-201ENST00000252816 SLC25A48Q6ZT89 311 aaKnown RBP18.3■□□□□ 0.52
LSM4-201ENST00000252816 FAM89BQ8N5H3 189 aa18.3■□□□□ 0.52
LSM4-201ENST00000252816 CT45A3Q8NHU0 189 aa18.3■□□□□ 0.52
LSM4-201ENST00000252816 FAM3DQ96BQ1 224 aa18.3■□□□□ 0.52
LSM4-201ENST00000252816 MMP27Q9H306 513 aa18.3■□□□□ 0.52
LSM4-201ENST00000252816 KCNIP1Q9NZI2 227 aa18.3■□□□□ 0.52
LSM4-201ENST00000252816 LRRC42Q9Y546 428 aa18.3■□□□□ 0.52
LSM4-201ENST00000252816 TET2Q6N021 2002 aaPredicted RBP18.29■□□□□ 0.52
LSM4-201ENST00000252816 TRAV1-2A0A0B4J238 106 aa18.29■□□□□ 0.52
LSM4-201ENST00000252816 IGHV1-3A0A0C4DH29 117 aa18.29■□□□□ 0.52
LSM4-201ENST00000252816 GAPDHP04406 335 aaKnown RBP18.29■□□□□ 0.52
LSM4-201ENST00000252816 OR10A3P58181 314 aa18.29■□□□□ 0.52
LSM4-201ENST00000252816 PLA2G7Q13093 441 aa18.29■□□□□ 0.52
LSM4-201ENST00000252816 GNMTQ14749 295 aa18.29■□□□□ 0.52
LSM4-201ENST00000252816 C2orf68Q2NKX9 166 aa18.29■□□□□ 0.52
LSM4-201ENST00000252816 C2orf76Q3KRA6 126 aa18.29■□□□□ 0.52
LSM4-201ENST00000252816 ARSJQ5FYB0 599 aaPredicted RBP18.29■□□□□ 0.52
LSM4-201ENST00000252816 HES5Q5TA89 166 aa18.29■□□□□ 0.52
LSM4-201ENST00000252816 ZNF554Q86TJ5 538 aa18.29■□□□□ 0.52
LSM4-201ENST00000252816 OR52L2PQ8NGH6 319 aa18.29■□□□□ 0.52
LSM4-201ENST00000252816 URM1Q9BTM9 101 aaKnown RBP18.29■□□□□ 0.52
LSM4-201ENST00000252816 OR2S2Q9NQN1 319 aa18.29■□□□□ 0.52
LSM4-201ENST00000252816 IGHV3-72A0A0B4J1Y9 119 aa18.28■□□□□ 0.52
LSM4-201ENST00000252816 FOXI3A8MTJ6 420 aaPredicted RBP18.28■□□□□ 0.52
LSM4-201ENST00000252816 LDLRAD4O15165 306 aa18.28■□□□□ 0.52
LSM4-201ENST00000252816 NAPSAO96009 420 aa18.28■□□□□ 0.52
LSM4-201ENST00000252816 CD28P10747 220 aa18.28■□□□□ 0.52
LSM4-201ENST00000252816 PSMB9P28065 219 aa18.28■□□□□ 0.52
LSM4-201ENST00000252816 PSMD7P51665 324 aa18.28■□□□□ 0.52
LSM4-201ENST00000252816 HNF4GQ14541 408 aa18.28■□□□□ 0.52
LSM4-201ENST00000252816 MOB3BQ86TA1 216 aa18.28■□□□□ 0.52
LSM4-201ENST00000252816 PLEKHJ1Q9NW61 149 aa18.28■□□□□ 0.52
LSM4-201ENST00000252816 FBXO24O75426 580 aa18.27■□□□□ 0.52
LSM4-201ENST00000252816 IGKV1D-33P01593 117 aa18.27■□□□□ 0.52
LSM4-201ENST00000252816 IGKV1-33P01594 117 aa18.27■□□□□ 0.52
LSM4-201ENST00000252816 LPLP06858 475 aa18.27■□□□□ 0.52
LSM4-201ENST00000252816 ZNF137PP52743 207 aa18.27■□□□□ 0.52
LSM4-201ENST00000252816 TMEM50BP56557 158 aa18.27■□□□□ 0.52
LSM4-201ENST00000252816 HES1Q14469 280 aa18.27■□□□□ 0.52
LSM4-201ENST00000252816 HMGN3Q15651 99 aa18.27■□□□□ 0.52
LSM4-201ENST00000252816 MORN2Q502X0 79 aa18.27■□□□□ 0.52
LSM4-201ENST00000252816 C22orf42Q6IC83 251 aa18.27■□□□□ 0.52
LSM4-201ENST00000252816 ZNF880Q6PDB4 577 aa18.27■□□□□ 0.52
LSM4-201ENST00000252816 RTN4IP1Q8WWV3 396 aaPredicted RBP18.27■□□□□ 0.52
LSM4-201ENST00000252816 STEAP1Q9UHE8 339 aa18.27■□□□□ 0.52
LSM4-201ENST00000252816 AK3Q9UIJ7 227 aa18.27■□□□□ 0.52
LSM4-201ENST00000252816 MOB4Q9Y3A3 225 aa18.27■□□□□ 0.52
LSM4-201ENST00000252816 TMEM272A0A1B0GTI8 110 aa18.26■□□□□ 0.51
LSM4-201ENST00000252816 PEX14O75381 377 aa18.26■□□□□ 0.51
LSM4-201ENST00000252816 CSF1P09603 554 aa18.26■□□□□ 0.51
LSM4-201ENST00000252816 TMEM11P17152 192 aa18.26■□□□□ 0.51
LSM4-201ENST00000252816 GALP22466 123 aa18.26■□□□□ 0.51
LSM4-201ENST00000252816 MYL9P24844 172 aa18.26■□□□□ 0.51
LSM4-201ENST00000252816 IL3RAP26951 378 aa18.26■□□□□ 0.51
LSM4-201ENST00000252816 PPP1CCP36873 323 aaKnown RBP18.26■□□□□ 0.51
LSM4-201ENST00000252816 VEGFCP49767 419 aa18.26■□□□□ 0.51
LSM4-201ENST00000252816 HTD2P86397 168 aa18.26■□□□□ 0.51
LSM4-201ENST00000252816 ZNF773Q6PK81 442 aa18.26■□□□□ 0.51
LSM4-201ENST00000252816 LYG1Q8N1E2 194 aa18.26■□□□□ 0.51
LSM4-201ENST00000252816 FAM110DQ8TAY7 271 aaPredicted RBP18.26■□□□□ 0.51
LSM4-201ENST00000252816 FCGR1BQ92637 280 aa18.26■□□□□ 0.51
LSM4-201ENST00000252816 HDHD3Q9BSH5 251 aaPredicted RBP18.26■□□□□ 0.51
LSM4-201ENST00000252816 JPT1Q9UK76 154 aa18.26■□□□□ 0.51
LSM4-201ENST00000252816 M0QZK8 103 aa18.25■□□□□ 0.51
LSM4-201ENST00000252816 PDCD5O14737 125 aa18.25■□□□□ 0.51
LSM4-201ENST00000252816 EBI3Q14213 229 aa18.25■□□□□ 0.51
LSM4-201ENST00000252816 STEAP3Q658P3 488 aa18.25■□□□□ 0.51
LSM4-201ENST00000252816 NR2C2APQ86WQ0 139 aa18.25■□□□□ 0.51
LSM4-201ENST00000252816 ARHGAP5-AS1Q96IT6 56 aa18.25■□□□□ 0.51
LSM4-201ENST00000252816 CHMP1AQ9HD42 196 aaPredicted RBP18.25■□□□□ 0.51
LSM4-201ENST00000252816 HSF4Q9ULV5 492 aa18.25■□□□□ 0.51
LSM4-201ENST00000252816 IFITM5A6NNB3 132 aa18.24■□□□□ 0.51
LSM4-201ENST00000252816 ZNF736B4DX44 427 aaPredicted RBP18.24■□□□□ 0.51
LSM4-201ENST00000252816 PLAC9Q5JTB6 97 aa18.24■□□□□ 0.51
LSM4-201ENST00000252816 C9orf152Q5JTZ5 239 aa18.24■□□□□ 0.51
LSM4-201ENST00000252816 IZUMO1Q8IYV9 350 aa18.24■□□□□ 0.51
LSM4-201ENST00000252816 C5orf56Q8N8D9 126 aa18.24■□□□□ 0.51
LSM4-201ENST00000252816 GALMQ96C23 342 aa18.24■□□□□ 0.51
LSM4-201ENST00000252816 RBMXL1Q96E39 390 aaKnown RBP18.24■□□□□ 0.51
LSM4-201ENST00000252816 EAF1Q96JC9 268 aaPredicted RBP18.24■□□□□ 0.51
LSM4-201ENST00000252816 CITED2Q99967 270 aaPredicted RBP18.24■□□□□ 0.51
LSM4-201ENST00000252816 NOTCH1P46531 2555 aa18.24■□□□□ 0.51
LSM4-201ENST00000252816 TRBV6-6A0A0A6YYG2 114 aa18.23■□□□□ 0.51
LSM4-201ENST00000252816 A0A0B4J203 849 aa18.23■□□□□ 0.51
LSM4-201ENST00000252816 YPEL1O60688 119 aa18.23■□□□□ 0.51
LSM4-201ENST00000252816 RAB3BP20337 219 aa18.23■□□□□ 0.51
LSM4-201ENST00000252816 TGIF2LXQ8IUE1 241 aa18.23■□□□□ 0.51
LSM4-201ENST00000252816 ODF3L1Q8IXM7 274 aa18.23■□□□□ 0.51
LSM4-201ENST00000252816 Q8N6K4 173 aa18.23■□□□□ 0.51
LSM4-201ENST00000252816 SETD6Q8TBK2 473 aa18.23■□□□□ 0.51
LSM4-201ENST00000252816 YPEL2Q96QA6 119 aa18.23■□□□□ 0.51
LSM4-201ENST00000252816 ABHD14AQ9BUJ0 271 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms