RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 SMIM21Q3B7S5 101 aa21.16■□□□□ 0.98
TMEM55B-201ENST00000250489 TMEM252Q8N6L7 170 aa21.16■□□□□ 0.98
TMEM55B-201ENST00000250489 SLC25A31Q9H0C2 315 aa21.16■□□□□ 0.98
TMEM55B-201ENST00000250489 TMEM231Q9H6L2 316 aa21.16■□□□□ 0.98
TMEM55B-201ENST00000250489 ZFHX2Q9C0A1 2572 aaPredicted RBP21.16■□□□□ 0.98
TMEM55B-201ENST00000250489 A0A1B0GU03 582 aa21.16■□□□□ 0.98
TMEM55B-201ENST00000250489 IFNL4K9M1U5 179 aa21.16■□□□□ 0.98
TMEM55B-201ENST00000250489 TMEM50AO95807 157 aa21.16■□□□□ 0.98
TMEM55B-201ENST00000250489 IGKV1-39P01597 117 aa21.16■□□□□ 0.98
TMEM55B-201ENST00000250489 IGKV1D-39P04432 117 aa21.16■□□□□ 0.98
TMEM55B-201ENST00000250489 ASCL1P50553 236 aa21.16■□□□□ 0.98
TMEM55B-201ENST00000250489 F2RL1P55085 397 aa21.16■□□□□ 0.98
TMEM55B-201ENST00000250489 SWI5Q1ZZU3 235 aa21.16■□□□□ 0.98
TMEM55B-201ENST00000250489 TREM1Q9NP99 234 aa21.16■□□□□ 0.98
TMEM55B-201ENST00000250489 OOEPA6NGQ2 149 aa21.15■□□□□ 0.98
TMEM55B-201ENST00000250489 NXPH3O95157 252 aa21.15■□□□□ 0.98
TMEM55B-201ENST00000250489 EPHA1P21709 976 aa21.15■□□□□ 0.98
TMEM55B-201ENST00000250489 ALKBH2Q6NS38 261 aa21.15■□□□□ 0.98
TMEM55B-201ENST00000250489 LRP11Q86VZ4 500 aa21.15■□□□□ 0.98
TMEM55B-201ENST00000250489 DRAM1Q8N682 238 aa21.15■□□□□ 0.98
TMEM55B-201ENST00000250489 OR2Z1Q8NG97 314 aa21.15■□□□□ 0.98
TMEM55B-201ENST00000250489 LYPD6BQ8NI32 183 aa21.15■□□□□ 0.98
TMEM55B-201ENST00000250489 FAM57AQ8TBR7 257 aa21.15■□□□□ 0.98
TMEM55B-201ENST00000250489 GALMQ96C23 342 aa21.15■□□□□ 0.98
TMEM55B-201ENST00000250489 LRFN3Q9BTN0 628 aa21.15■□□□□ 0.98
TMEM55B-201ENST00000250489 METRNQ9UJH8 293 aa21.15■□□□□ 0.98
TMEM55B-201ENST00000250489 RNF115Q9Y4L5 304 aa21.15■□□□□ 0.98
TMEM55B-201ENST00000250489 SVILO95425 2214 aa21.15■□□□□ 0.98
TMEM55B-201ENST00000250489 RIF1Q5UIP0 2472 aaKnown RBP21.14■□□□□ 0.98
TMEM55B-201ENST00000250489 DANCRP0C864 163 aa21.14■□□□□ 0.98
TMEM55B-201ENST00000250489 ID4P47928 161 aa21.14■□□□□ 0.98
TMEM55B-201ENST00000250489 COL10A1Q03692 680 aa21.14■□□□□ 0.98
TMEM55B-201ENST00000250489 KRTCAP3Q53RY4 240 aa21.14■□□□□ 0.98
TMEM55B-201ENST00000250489 C10orf91Q5T1B1 145 aa21.14■□□□□ 0.98
TMEM55B-201ENST00000250489 ODF3L1Q8IXM7 274 aa21.14■□□□□ 0.98
TMEM55B-201ENST00000250489 LRRC29Q8WV35 223 aa21.14■□□□□ 0.98
TMEM55B-201ENST00000250489 LSM10Q969L4 123 aaKnown RBP21.14■□□□□ 0.98
TMEM55B-201ENST00000250489 SFXN3Q9BWM7 321 aa21.14■□□□□ 0.98
TMEM55B-201ENST00000250489 LIN7CQ9NUP9 197 aaKnown RBP21.14■□□□□ 0.98
TMEM55B-201ENST00000250489 CHST1O43916 411 aa21.14■□□□□ 0.97
TMEM55B-201ENST00000250489 MUC1P15941 1255 aaPredicted RBP21.14■□□□□ 0.97
TMEM55B-201ENST00000250489 CEACAM8P31997 349 aaPredicted RBP21.14■□□□□ 0.97
TMEM55B-201ENST00000250489 CD200P41217 278 aa21.14■□□□□ 0.97
TMEM55B-201ENST00000250489 ZNF273Q14593 569 aa21.14■□□□□ 0.97
TMEM55B-201ENST00000250489 C3orf36Q3SXR2 165 aa21.14■□□□□ 0.97
TMEM55B-201ENST00000250489 HSD17B11Q8NBQ5 300 aa21.14■□□□□ 0.97
TMEM55B-201ENST00000250489 TSNAXQ99598 290 aaKnown RBP21.14■□□□□ 0.97
TMEM55B-201ENST00000250489 SH3BGRL3Q9H299 93 aa21.14■□□□□ 0.97
TMEM55B-201ENST00000250489 UQCC1Q9NVA1 299 aa21.14■□□□□ 0.97
TMEM55B-201ENST00000250489 DUSP13Q9UII6 198 aa21.14■□□□□ 0.97
TMEM55B-201ENST00000250489 FAM96BQ9Y3D0 163 aa21.14■□□□□ 0.97
TMEM55B-201ENST00000250489 WRBO00258 174 aa21.13■□□□□ 0.97
TMEM55B-201ENST00000250489 HBZP02008 142 aa21.13■□□□□ 0.97
TMEM55B-201ENST00000250489 ZNF585BQ52M93 769 aa21.13■□□□□ 0.97
TMEM55B-201ENST00000250489 KIAA1324LA8MWY0 1029 aaPredicted RBP21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 OMGP23515 440 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 IL2RGP31785 369 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 GABRA2P47869 451 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 PAX9P55771 341 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 CLINT1Q14677 625 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 RNASE11Q8TAA1 199 aaKnown RBP21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 NKX6-2Q9C056 277 aaPredicted RBP21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 CARHSP1Q9Y2V2 147 aaKnown RBP21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 AKAP13Q12802 2813 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 F8W036 122 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 MKRN2OSH3BPM6 223 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 IGKV1-5P01602 117 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 IGHV3-13P01766 116 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 CRYAAP02489 173 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 ZNF16P17020 682 aaPredicted RBP21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 ZNF266Q14584 549 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 FAM180AQ6UWF9 173 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 Q6ZRM9 215 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 SPAG16Q8N0X2 631 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 CD177Q8N6Q3 437 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 OR52L2PQ8NGH6 319 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 MUCL1Q96DR8 90 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 TOLLIPQ9H0E2 274 aa21.12■□□□□ 0.97
TMEM55B-201ENST00000250489 TSPAN4O14817 238 aa21.11■□□□□ 0.97
TMEM55B-201ENST00000250489 EGR1P18146 543 aa21.11■□□□□ 0.97
TMEM55B-201ENST00000250489 NKX6-1P78426 367 aaPredicted RBP21.11■□□□□ 0.97
TMEM55B-201ENST00000250489 BAXQ07812 192 aa21.11■□□□□ 0.97
TMEM55B-201ENST00000250489 IZUMO4Q1ZYL8 232 aa21.11■□□□□ 0.97
TMEM55B-201ENST00000250489 KRBOX4Q5JUW0 171 aa21.11■□□□□ 0.97
TMEM55B-201ENST00000250489 ASCL5Q7RTU5 278 aa21.11■□□□□ 0.97
TMEM55B-201ENST00000250489 MRGPRDQ8TDS7 321 aa21.11■□□□□ 0.97
TMEM55B-201ENST00000250489 TMEM171Q8WVE6 324 aa21.11■□□□□ 0.97
TMEM55B-201ENST00000250489 CACFD1Q9UGQ2 172 aa21.11■□□□□ 0.97
TMEM55B-201ENST00000250489 DNASE2O00115 360 aaPredicted RBP21.1■□□□□ 0.97
TMEM55B-201ENST00000250489 GLRXP35754 106 aa21.1■□□□□ 0.97
TMEM55B-201ENST00000250489 GLIPR1P48060 266 aa21.1■□□□□ 0.97
TMEM55B-201ENST00000250489 TAGLNQ01995 201 aaKnown RBP21.1■□□□□ 0.97
TMEM55B-201ENST00000250489 GUCA2BQ16661 112 aa21.1■□□□□ 0.97
TMEM55B-201ENST00000250489 SVBPQ8N300 66 aa21.1■□□□□ 0.97
TMEM55B-201ENST00000250489 ZNF645Q8N7E2 425 aa21.1■□□□□ 0.97
TMEM55B-201ENST00000250489 LOC105371267A0A1B0GV96 52 aa21.1■□□□□ 0.97
TMEM55B-201ENST00000250489 RNF212BA8MTL3 300 aa21.1■□□□□ 0.97
TMEM55B-201ENST00000250489 RNASEK-C17orf49H0YIS7 233 aa21.1■□□□□ 0.97
TMEM55B-201ENST00000250489 AGPAT2O15120 278 aa21.1■□□□□ 0.97
TMEM55B-201ENST00000250489 RAB5CP51148 216 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms