RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 PSPNO60542 156 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 IGKV1-39P01597 117 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 IGKV1D-39P04432 117 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 EIF2S3P41091 472 aaKnown RBP13.63□□□□□ -0.23
UBE3D-201ENST00000237186 FAM122CQ6P4D5 195 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 ASCL5Q7RTU5 278 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 ZADH2Q8N4Q0 377 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 ZNF610Q8N9Z0 462 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 ZBTB34Q8NCN2 500 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 OR5C1Q8NGR4 320 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 OR51H1Q8NH63 302 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 MBD3L2Q8NHZ7 208 aaPredicted RBP13.63□□□□□ -0.23
UBE3D-201ENST00000237186 RAB40CQ96S21 281 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 PROCRQ9UNN8 238 aa13.63□□□□□ -0.23
UBE3D-201ENST00000237186 GVINP1Q7Z2Y8 2422 aa13.62□□□□□ -0.23
UBE3D-201ENST00000237186 IFNL4K9M1U5 179 aa13.62□□□□□ -0.23
UBE3D-201ENST00000237186 WRBO00258 174 aa13.62□□□□□ -0.23
UBE3D-201ENST00000237186 ATP6V0CP27449 155 aa13.62□□□□□ -0.23
UBE3D-201ENST00000237186 CEACAM6P40199 344 aa13.62□□□□□ -0.23
UBE3D-201ENST00000237186 NPBWR1P48145 328 aa13.62□□□□□ -0.23
UBE3D-201ENST00000237186 FHITP49789 147 aa13.62□□□□□ -0.23
UBE3D-201ENST00000237186 ZNF616Q08AN1 781 aa13.62□□□□□ -0.23
UBE3D-201ENST00000237186 CLINT1Q14677 625 aa13.62□□□□□ -0.23
UBE3D-201ENST00000237186 PEA15Q15121 130 aa13.62□□□□□ -0.23
UBE3D-201ENST00000237186 ZNF718Q3SXZ3 478 aa13.62□□□□□ -0.23
UBE3D-201ENST00000237186 ZNF585BQ52M93 769 aa13.62□□□□□ -0.23
UBE3D-201ENST00000237186 CXorf67Q86X51 503 aaPredicted RBP13.62□□□□□ -0.23
UBE3D-201ENST00000237186 KDF1Q8NAX2 398 aaPredicted RBP13.62□□□□□ -0.23
UBE3D-201ENST00000237186 LFNGQ8NES3 379 aa13.62□□□□□ -0.23
UBE3D-201ENST00000237186 PARP12Q9H0J9 701 aaKnown RBP13.62□□□□□ -0.23
UBE3D-201ENST00000237186 HIPK2Q9H2X6 1198 aa13.62□□□□□ -0.23
UBE3D-201ENST00000237186 LIN7CQ9NUP9 197 aaKnown RBP13.62□□□□□ -0.23
UBE3D-201ENST00000237186 KCNIP1Q9NZI2 227 aa13.62□□□□□ -0.23
UBE3D-201ENST00000237186 NDRG3Q9UGV2 375 aa13.62□□□□□ -0.23
UBE3D-201ENST00000237186 IGHV2OR16-5A0A0B4J2B6 119 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 OR5H1A6NKK0 313 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 F12P00748 615 aaPredicted RBP13.61□□□□□ -0.23
UBE3D-201ENST00000237186 PRH1P02810 166 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 ASCL1P50553 236 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 DYNLT3P51808 116 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 MSMO1Q15800 293 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 GUK1Q16774 197 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 WDR82Q6UXN9 313 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 ACP7Q6ZNF0 438 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 Q6ZR03 302 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 Q6ZRM9 215 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 GNPNAT1Q96EK6 184 aaPredicted RBP13.61□□□□□ -0.23
UBE3D-201ENST00000237186 SMDT1Q9H4I9 107 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 KPTNQ9Y664 436 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 WSB1Q9Y6I7 421 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 IGHV1-18A0A0C4DH31 117 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 TXNL1O43396 289 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 C1QL1O75973 258 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 CTRB1P17538 263 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 OMGP23515 440 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 RPL23AP62750 156 aaKnown RBP13.61□□□□□ -0.23
UBE3D-201ENST00000237186 PAX5Q02548 391 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 RTP5Q14D33 572 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 CTRB2Q6GPI1 263 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 TMEM88Q6PEY1 159 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 ZNF826PQ6ZT77 177 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 BEND4Q6ZU67 534 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 SEM1Q6ZVN7 128 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 ZNF295-AS1Q8N0V1 137 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 PRR18Q8N4B5 295 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 OR2G3Q8NGZ4 309 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 GALMQ96C23 342 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 OR14J1Q9UGF5 321 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 PPP1R3CQ9UQK1 317 aa13.61□□□□□ -0.23
UBE3D-201ENST00000237186 URB1O60287 2271 aaKnown RBP13.6□□□□□ -0.23
UBE3D-201ENST00000237186 OOEPA6NGQ2 149 aa13.6□□□□□ -0.23
UBE3D-201ENST00000237186 RNF212BA8MTL3 300 aa13.6□□□□□ -0.23
UBE3D-201ENST00000237186 TIMM8AO60220 97 aaPredicted RBP13.6□□□□□ -0.23
UBE3D-201ENST00000237186 IGKV1-5P01602 117 aa13.6□□□□□ -0.23
UBE3D-201ENST00000237186 GCH1P30793 250 aa13.6□□□□□ -0.23
UBE3D-201ENST00000237186 HFEQ30201 348 aa13.6□□□□□ -0.23
UBE3D-201ENST00000237186 SP5Q6BEB4 398 aaPredicted RBP13.6□□□□□ -0.23
UBE3D-201ENST00000237186 TMEM182Q6ZP80 229 aaPredicted RBP13.6□□□□□ -0.23
UBE3D-201ENST00000237186 BHLHA15Q7RTS1 189 aaPredicted RBP13.6□□□□□ -0.23
UBE3D-201ENST00000237186 DRAM1Q8N682 238 aa13.6□□□□□ -0.23
UBE3D-201ENST00000237186 RBM7Q9Y580 266 aaKnown RBP13.6□□□□□ -0.23
UBE3D-201ENST00000237186 SLC25A15Q9Y619 301 aa13.6□□□□□ -0.23
UBE3D-201ENST00000237186 IGHV3-64DA0A0J9YX35 117 aa13.59□□□□□ -0.23
UBE3D-201ENST00000237186 C12orf77C9JDV5 145 aa13.59□□□□□ -0.23
UBE3D-201ENST00000237186 WNT9BO14905 357 aa13.59□□□□□ -0.23
UBE3D-201ENST00000237186 CST7O76096 145 aa13.59□□□□□ -0.23
UBE3D-201ENST00000237186 SULT1A1P50225 295 aa13.59□□□□□ -0.23
UBE3D-201ENST00000237186 MZT1Q08AG7 82 aa13.59□□□□□ -0.23
UBE3D-201ENST00000237186 ZNF645Q8N7E2 425 aa13.59□□□□□ -0.23
UBE3D-201ENST00000237186 ATP5SQ99766 215 aa13.59□□□□□ -0.23
UBE3D-201ENST00000237186 OPN3Q9H1Y3 402 aaPredicted RBP13.59□□□□□ -0.23
UBE3D-201ENST00000237186 SEBOXQ9HB31 216 aaPredicted RBP13.59□□□□□ -0.23
UBE3D-201ENST00000237186 COA4Q9NYJ1 87 aa13.59□□□□□ -0.23
UBE3D-201ENST00000237186 BTBD17A6NE02 478 aa13.59□□□□□ -0.23
UBE3D-201ENST00000237186 DFFBO76075 338 aa13.59□□□□□ -0.23
UBE3D-201ENST00000237186 PTBP3O95758 552 aaKnown RBP13.59□□□□□ -0.23
UBE3D-201ENST00000237186 CEBPDP49716 269 aaPredicted RBP13.59□□□□□ -0.23
UBE3D-201ENST00000237186 TAS2R30P59541 319 aa13.59□□□□□ -0.23
UBE3D-201ENST00000237186 EIF4EBP1Q13541 118 aaPredicted RBP13.59□□□□□ -0.23
UBE3D-201ENST00000237186 EIF2S3LQ2VIR3 472 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms