RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ZNF441Q8N8Z8 693 aa12.18□□□□□ -0.46
PCDHB3-201ENST00000231130 CCDC71LQ8N9Z2 235 aa12.18□□□□□ -0.46
PCDHB3-201ENST00000231130 RPRMQ9NS64 109 aa12.18□□□□□ -0.46
PCDHB3-201ENST00000231130 IGKV1-12A0A0C4DH73 117 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 PRSS47A8MTI9 375 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 IGKV1D-12P01611 117 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 BMP5P22003 454 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 GCH1P30793 250 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 RSPO1Q2MKA7 263 aaPredicted RBP12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 SYT13Q7L8C5 426 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 GAPTQ8N292 157 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 TM2D1Q9BX74 207 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 NBEAQ8NFP9 2946 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 PFN1P07737 140 aaKnown RBP12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 POU2F2P09086 479 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 CD38P28907 300 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 NPBWR2P48146 333 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 RPS16P62249 146 aaKnown RBP12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 MRPS21P82921 87 aaKnown RBP12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 PLCXD3Q63HM9 321 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 LYG1Q8N1E2 194 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 OR51G1Q8NGK1 321 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 APH1AQ96BI3 265 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 MTIF3Q9H2K0 278 aaKnown RBP12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 RBKSQ9H477 322 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 MANBALQ9NQG1 85 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 AHCTF1Q8WYP5 2266 aa12.17□□□□□ -0.46
PCDHB3-201ENST00000231130 NKX6-3A6NJ46 265 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 TNFSF13O75888 250 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 KLF3P57682 345 aaPredicted RBP12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 C9orf135Q5VTT2 229 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 OSR2Q8N2R0 312 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 ST6GALNAC3Q8NDV1 305 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 SSC4DQ8WTU2 575 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 SPTSSAQ969W0 71 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 RYDENQ9NUL5 291 aaKnown RBP12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 NAT8Q9UHE5 227 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 MMP17Q9ULZ9 603 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 B4GALT1P15291 398 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 CDKN1BP46527 198 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 SHBQ15464 509 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 OR4F5Q8NH21 305 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 LHX4Q969G2 390 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 OR4F4Q96R69 305 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 CCL28Q9NRJ3 127 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 TMEM242Q9NWH2 141 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 NRASP01111 189 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 CELA2AP08217 269 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 SCTP09683 121 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 CCL1P22362 96 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 CDKN1AP38936 164 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 OR4D5Q8NGN0 318 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 IL1F10Q8WWZ1 152 aa12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 AKIRIN1Q9H9L7 192 aaPredicted RBP12.16□□□□□ -0.46
PCDHB3-201ENST00000231130 TIAF1O95411 115 aa12.15□□□□□ -0.46
PCDHB3-201ENST00000231130 IFNA1P01562 189 aa12.15□□□□□ -0.46
PCDHB3-201ENST00000231130 HYAL1Q12794 435 aa12.15□□□□□ -0.46
PCDHB3-201ENST00000231130 KCNIP4Q6PIL6 250 aa12.15□□□□□ -0.46
PCDHB3-201ENST00000231130 ZNF818PQ6ZRF7 136 aa12.15□□□□□ -0.46
PCDHB3-201ENST00000231130 TCF23Q7RTU1 214 aa12.15□□□□□ -0.46
PCDHB3-201ENST00000231130 TMPRSS7Q7RTY8 843 aa12.15□□□□□ -0.46
PCDHB3-201ENST00000231130 TMEM106BQ9NUM4 274 aa12.15□□□□□ -0.46
PCDHB3-201ENST00000231130 DHHO43323 396 aa12.15□□□□□ -0.46
PCDHB3-201ENST00000231130 ZNF737O75373 536 aa12.15□□□□□ -0.46
PCDHB3-201ENST00000231130 HRASP01112 189 aa12.15□□□□□ -0.46
PCDHB3-201ENST00000231130 RANP62826 216 aaKnown RBP12.15□□□□□ -0.46
PCDHB3-201ENST00000231130 SUMO1P63165 101 aaKnown RBP12.15□□□□□ -0.46
PCDHB3-201ENST00000231130 OR1K1Q8NGR3 316 aa12.15□□□□□ -0.46
PCDHB3-201ENST00000231130 DEFB126Q9BYW3 111 aa12.15□□□□□ -0.46
PCDHB3-201ENST00000231130 ZDHHC11Q9H8X9 412 aa12.15□□□□□ -0.46
PCDHB3-201ENST00000231130 SLC39A9Q9NUM3 307 aa12.15□□□□□ -0.46
PCDHB3-201ENST00000231130 OR6C3Q9NZP0 311 aa12.15□□□□□ -0.46
PCDHB3-201ENST00000231130 TRAV39A0A0B4J263 110 aa12.15□□□□□ -0.47
PCDHB3-201ENST00000231130 LILRA5A6NI73 299 aa12.15□□□□□ -0.47
PCDHB3-201ENST00000231130 AQP7P3A6NL99 342 aa12.15□□□□□ -0.47
PCDHB3-201ENST00000231130 A8MXE2 369 aa12.15□□□□□ -0.47
PCDHB3-201ENST00000231130 TRDCB7Z8K6 153 aa12.15□□□□□ -0.47
PCDHB3-201ENST00000231130 LDLRAD2Q5SZI1 272 aa12.15□□□□□ -0.47
PCDHB3-201ENST00000231130 ZNF468Q5VIY5 522 aaPredicted RBP12.15□□□□□ -0.47
PCDHB3-201ENST00000231130 ANKRD37Q7Z713 158 aa12.15□□□□□ -0.47
PCDHB3-201ENST00000231130 Q8NFD4 153 aa12.15□□□□□ -0.47
PCDHB3-201ENST00000231130 GTF3C1Q12789 2109 aa12.14□□□□□ -0.47
PCDHB3-201ENST00000231130 IGHV1OR21-1A0A087WYE8 117 aa12.14□□□□□ -0.47
PCDHB3-201ENST00000231130 TPPP2P59282 170 aa12.14□□□□□ -0.47
PCDHB3-201ENST00000231130 SELENOTP62341 195 aa12.14□□□□□ -0.47
PCDHB3-201ENST00000231130 PLXDC1Q8IUK5 500 aa12.14□□□□□ -0.47
PCDHB3-201ENST00000231130 IL36RNQ9UBH0 155 aa12.14□□□□□ -0.47
PCDHB3-201ENST00000231130 IGKV1D-13A0A0B4J2D9 117 aa12.14□□□□□ -0.47
PCDHB3-201ENST00000231130 PITX3O75364 302 aa12.14□□□□□ -0.47
PCDHB3-201ENST00000231130 IGKV1-13P0DP09 117 aa12.14□□□□□ -0.47
PCDHB3-201ENST00000231130 TCN2P20062 427 aa12.14□□□□□ -0.47
PCDHB3-201ENST00000231130 ZFP36L1Q07352 338 aaKnown RBP12.14□□□□□ -0.47
PCDHB3-201ENST00000231130 COA6Q5JTJ3 125 aaKnown RBP12.14□□□□□ -0.47
PCDHB3-201ENST00000231130 Q5PR19 223 aa12.14□□□□□ -0.47
PCDHB3-201ENST00000231130 S100A7AQ86SG5 101 aa12.14□□□□□ -0.47
PCDHB3-201ENST00000231130 MOB3AQ96BX8 217 aa12.14□□□□□ -0.47
PCDHB3-201ENST00000231130 TMEM222Q9H0R3 208 aa12.14□□□□□ -0.47
PCDHB3-201ENST00000231130 FREM1Q5H8C1 2179 aa12.14□□□□□ -0.47
PCDHB3-201ENST00000231130 CCL2P13500 99 aa12.13□□□□□ -0.47
PCDHB3-201ENST00000231130 SHHQ15465 462 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms