RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 H7BYZ3 331 aa11.93□□□□□ -0.5
SCNN1A-201ENST00000228916 IZUMO4Q1ZYL8 232 aa11.93□□□□□ -0.5
SCNN1A-201ENST00000228916 ZNF468Q5VIY5 522 aaPredicted RBP11.93□□□□□ -0.5
SCNN1A-201ENST00000228916 NECAP1Q8NC96 275 aa11.93□□□□□ -0.5
SCNN1A-201ENST00000228916 REPIN1Q9BWE0 567 aaKnown RBP11.93□□□□□ -0.5
SCNN1A-201ENST00000228916 WDR61Q9GZS3 305 aaKnown RBP11.93□□□□□ -0.5
SCNN1A-201ENST00000228916 TMEM250H0YL14 139 aa11.93□□□□□ -0.5
SCNN1A-201ENST00000228916 TOX3O15405 576 aaPredicted RBP11.93□□□□□ -0.5
SCNN1A-201ENST00000228916 SERPINE2P07093 398 aa11.93□□□□□ -0.5
SCNN1A-201ENST00000228916 PSG2P11465 335 aa11.93□□□□□ -0.5
SCNN1A-201ENST00000228916 S100GP29377 79 aa11.93□□□□□ -0.5
SCNN1A-201ENST00000228916 ACTL10Q5JWF8 245 aa11.93□□□□□ -0.5
SCNN1A-201ENST00000228916 LSM10Q969L4 123 aaKnown RBP11.93□□□□□ -0.5
SCNN1A-201ENST00000228916 OR5B12Q96R08 314 aa11.93□□□□□ -0.5
SCNN1A-201ENST00000228916 PLK3Q9H4B4 646 aa11.93□□□□□ -0.5
SCNN1A-201ENST00000228916 PSENENQ9NZ42 101 aa11.93□□□□□ -0.5
SCNN1A-201ENST00000228916 HRASP01112 189 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 RAC1P63000 192 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 HBG1P69891 147 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 HBG2P69892 147 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 ZNF324BQ6AW86 544 aaPredicted RBP11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 SAXO1Q8IYX7 474 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 TMEM68Q96MH6 324 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 ALKBH3Q96Q83 286 aaPredicted RBP11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 PCGF1Q9BSM1 259 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 CACNG5Q9UF02 275 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 B4E171 279 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 G3V3Y1 287 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 IGKV1-39P01597 117 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 IGKV1D-39P04432 117 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 CCL3P10147 92 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 IAPPP10997 89 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 TUBG1P23258 451 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 TSPAN7P41732 249 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 OR51H1Q8NH63 302 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 LHX4Q969G2 390 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 TMEM18Q96B42 140 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 ELOVL1Q9BW60 279 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 FGF23Q9GZV9 251 aaPredicted RBP11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 OR2W1Q9Y3N9 320 aa11.92□□□□□ -0.5
SCNN1A-201ENST00000228916 LRRC3CA6NJW4 275 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 DNPH1O43598 174 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 GDF9O60383 454 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 TYMSP04818 313 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 TNFRSF9Q07011 255 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 RPP25LQ8N5L8 163 aaKnown RBP11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 OR4C12Q96R67 309 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 FOXB1Q99853 325 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 C1QTNF5Q9BXJ0 243 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 IL36RNQ9UBH0 155 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 A0A1B0GWJ7 208 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 GGCTO75223 188 aaKnown RBP11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 IGKV1D-33P01593 117 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 IGKV1-33P01594 117 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 CCKARP32238 428 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 PAX5Q02548 391 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 ACOT6Q3I5F7 207 aaPredicted RBP11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 SNHG12Q9BXW3 62 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 SLC39A9Q9NUM3 307 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 A0A1W2PQM1 296 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 OR4A8P0C604 315 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 SRFP11831 508 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 ELLP55199 621 aaPredicted RBP11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 RAC3P60763 192 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 PCBD1P61457 104 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 IQCJQ1A5X6 159 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 MRPL30Q8TCC3 161 aaKnown RBP11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 TAF15Q92804 592 aaKnown RBP eCLIP11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 RPUSD4Q96CM3 377 aaKnown RBP11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 PRDM14Q9GZV8 571 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 PARLQ9H300 379 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 RARRES3Q9UL19 164 aa11.91□□□□□ -0.5
SCNN1A-201ENST00000228916 ZNF716A6NP11 495 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 HSPB6O14558 160 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 IDH3GP51553 393 aaPredicted RBP11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 GUSBP11Q6P575 273 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 ANAPC16Q96DE5 110 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 RIMS4Q9H426 269 aaPredicted RBP11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 OR6C3Q9NZP0 311 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 FUT9Q9Y231 359 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 TIMM9Q9Y5J7 89 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 TRBV6-6A0A0A6YYG2 114 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 A0A1W2PPQ1 181 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 FGF5P12034 268 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 HNF4GQ14541 408 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 RTP5Q14D33 572 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 PCOLCEQ15113 449 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 C20orf204Q6ZNR8 217 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 COLCA1Q6ZS62 124 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 NEK7Q8TDX7 302 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 TMEM37Q8WXS4 190 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 PCED1AQ9H1Q7 454 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 OR51I2Q9H344 312 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 MTCH1Q9NZJ7 389 aa11.9□□□□□ -0.5
SCNN1A-201ENST00000228916 FRYQ5TBA9 3013 aa11.9□□□□□ -0.51
SCNN1A-201ENST00000228916 CD300LBA8K4G0 201 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 IGKV1-5P01602 117 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 MMP7P09237 267 aaPredicted RBP11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 CEACAM16Q2WEN9 425 aa11.89□□□□□ -0.51
SCNN1A-201ENST00000228916 CISD2Q8N5K1 135 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms