RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 SRSF3P84103 164 aaKnown RBP16.06■□□□□ 0.16
YBX3-201ENST00000228251 EIF4EBP1Q13541 118 aaPredicted RBP16.06■□□□□ 0.16
YBX3-201ENST00000228251 SMIM21Q3B7S5 101 aa16.06■□□□□ 0.16
YBX3-201ENST00000228251 ZNF585BQ52M93 769 aa16.06■□□□□ 0.16
YBX3-201ENST00000228251 ATRAIDQ6UW56 229 aa16.06■□□□□ 0.16
YBX3-201ENST00000228251 ZNF295-AS1Q8N0V1 137 aa16.06■□□□□ 0.16
YBX3-201ENST00000228251 OR10Z1Q8NGY1 313 aa16.06■□□□□ 0.16
YBX3-201ENST00000228251 OR51H1Q8NH63 302 aa16.06■□□□□ 0.16
YBX3-201ENST00000228251 OR1L1Q8NH94 360 aa16.06■□□□□ 0.16
YBX3-201ENST00000228251 LSM10Q969L4 123 aaKnown RBP16.06■□□□□ 0.16
YBX3-201ENST00000228251 GPR146Q96CH1 333 aa16.06■□□□□ 0.16
YBX3-201ENST00000228251 IGLV3-9A0A075B6K5 115 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 A0A1B0GU03 582 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 FAM24AA6NFZ4 105 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 MKRN2OSH3BPM6 223 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 ABCD4O14678 606 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 MED6O75586 246 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 TFF1P04155 84 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 ADCYAP1P18509 176 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 GLRXP35754 106 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 CEACAM6P40199 344 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 MZT1Q08AG7 82 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 PRR18Q8N4B5 295 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 DRAM1Q8N682 238 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 CD177Q8N6Q3 437 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 BORCS7-ASMTA0A0B4J1R7 106 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 OOEPA6NGQ2 149 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 SRRM5B3KS81 715 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 EGR1P18146 543 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 BLOC1S1P78537 153 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 COL10A1Q03692 680 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 AESQ08117 197 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 TMEM252Q8N6L7 170 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 TMEM171Q8WVE6 324 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 C5orf30Q96GV9 206 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 PLEKHF2Q9H8W4 249 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 COQ3Q9NZJ6 369 aa16.05■□□□□ 0.16
YBX3-201ENST00000228251 A8MXE2 369 aa16.04■□□□□ 0.16
YBX3-201ENST00000228251 M0R1B8 84 aa16.04■□□□□ 0.16
YBX3-201ENST00000228251 HSPA12AO43301 675 aa16.04■□□□□ 0.16
YBX3-201ENST00000228251 SSSCA1O60232 199 aa16.04■□□□□ 0.16
YBX3-201ENST00000228251 ZNF737O75373 536 aa16.04■□□□□ 0.16
YBX3-201ENST00000228251 IGKV1-5P01602 117 aa16.04■□□□□ 0.16
YBX3-201ENST00000228251 APOC3P02656 99 aa16.04■□□□□ 0.16
YBX3-201ENST00000228251 OR8U9P0C7N5 309 aa16.04■□□□□ 0.16
YBX3-201ENST00000228251 DANCRP0C864 163 aa16.04■□□□□ 0.16
YBX3-201ENST00000228251 PVALBP20472 110 aaPredicted RBP16.04■□□□□ 0.16
YBX3-201ENST00000228251 CAV2P51636 162 aa16.04■□□□□ 0.16
YBX3-201ENST00000228251 FAM180AQ6UWF9 173 aa16.04■□□□□ 0.16
YBX3-201ENST00000228251 Q6ZRM9 215 aa16.04■□□□□ 0.16
YBX3-201ENST00000228251 Q8NA96 180 aa16.04■□□□□ 0.16
YBX3-201ENST00000228251 OR8U1Q8NH10 309 aa16.04■□□□□ 0.16
YBX3-201ENST00000228251 LRRC29Q8WV35 223 aa16.04■□□□□ 0.16
YBX3-201ENST00000228251 MAGT1Q9H0U3 335 aa16.04■□□□□ 0.16
YBX3-201ENST00000228251 APC2O95996 2303 aa16.04■□□□□ 0.16
YBX3-201ENST00000228251 HBZP02008 142 aa16.03■□□□□ 0.16
YBX3-201ENST00000228251 SERPINE2P07093 398 aa16.03■□□□□ 0.16
YBX3-201ENST00000228251 MSMO1Q15800 293 aa16.03■□□□□ 0.16
YBX3-201ENST00000228251 SPRNQ5BIV9 151 aa16.03■□□□□ 0.16
YBX3-201ENST00000228251 C22orf34Q6ZV56 151 aa16.03■□□□□ 0.16
YBX3-201ENST00000228251 FAM90A1Q86YD7 464 aa16.03■□□□□ 0.16
YBX3-201ENST00000228251 OR2Z1Q8NG97 314 aa16.03■□□□□ 0.16
YBX3-201ENST00000228251 GALMQ96C23 342 aa16.03■□□□□ 0.16
YBX3-201ENST00000228251 ABHD17AQ96GS6 310 aa16.03■□□□□ 0.16
YBX3-201ENST00000228251 LIN7CQ9NUP9 197 aaKnown RBP16.03■□□□□ 0.16
YBX3-201ENST00000228251 KCNIP1Q9NZI2 227 aa16.03■□□□□ 0.16
YBX3-201ENST00000228251 PPP1R3CQ9UQK1 317 aa16.03■□□□□ 0.16
YBX3-201ENST00000228251 ATMQ13315 3056 aa16.03■□□□□ 0.16
YBX3-201ENST00000228251 CRYAAP02489 173 aa16.03■□□□□ 0.16
YBX3-201ENST00000228251 CCKARP32238 428 aa16.03■□□□□ 0.16
YBX3-201ENST00000228251 LURAP1Q96LR2 239 aa16.03■□□□□ 0.16
YBX3-201ENST00000228251 HRH4Q9H3N8 390 aa16.03■□□□□ 0.16
YBX3-201ENST00000228251 FAM212BQ9NTI7 297 aaPredicted RBP16.03■□□□□ 0.16
YBX3-201ENST00000228251 CARHSP1Q9Y2V2 147 aaKnown RBP16.03■□□□□ 0.16
YBX3-201ENST00000228251 IGKV1D-17A0A075B6S4 117 aa16.02■□□□□ 0.15
YBX3-201ENST00000228251 ATG12O94817 140 aa16.02■□□□□ 0.15
YBX3-201ENST00000228251 GLIPR1P48060 266 aa16.02■□□□□ 0.15
YBX3-201ENST00000228251 AKR1C2P52895 323 aa16.02■□□□□ 0.15
YBX3-201ENST00000228251 AKR1C1Q04828 323 aa16.02■□□□□ 0.15
YBX3-201ENST00000228251 BTN1A1Q13410 526 aa16.02■□□□□ 0.15
YBX3-201ENST00000228251 FAM53AQ6NSI3 398 aaPredicted RBP16.02■□□□□ 0.15
YBX3-201ENST00000228251 Q6ZRG5 221 aa16.02■□□□□ 0.15
YBX3-201ENST00000228251 ZNF645Q8N7E2 425 aa16.02■□□□□ 0.15
YBX3-201ENST00000228251 ZBTB34Q8NCN2 500 aa16.02■□□□□ 0.15
YBX3-201ENST00000228251 MUCL1Q96DR8 90 aa16.02■□□□□ 0.15
YBX3-201ENST00000228251 LRRC46Q96FV0 321 aa16.02■□□□□ 0.15
YBX3-201ENST00000228251 TSNAXQ99598 290 aaKnown RBP16.02■□□□□ 0.15
YBX3-201ENST00000228251 SLC25A31Q9H0C2 315 aa16.02■□□□□ 0.15
YBX3-201ENST00000228251 TP53TG5Q9Y2B4 290 aa16.02■□□□□ 0.15
YBX3-201ENST00000228251 DCHS1Q96JQ0 3298 aa16.01■□□□□ 0.15
YBX3-201ENST00000228251 USF3Q68DE3 2245 aa16.01■□□□□ 0.15
YBX3-201ENST00000228251 C15orf65H3BRN8 121 aa16.01■□□□□ 0.15
YBX3-201ENST00000228251 CHST1O43916 411 aa16.01■□□□□ 0.15
YBX3-201ENST00000228251 LHBP01229 141 aa16.01■□□□□ 0.15
YBX3-201ENST00000228251 CD5P06127 495 aa16.01■□□□□ 0.15
YBX3-201ENST00000228251 MUC1P15941 1255 aaPredicted RBP16.01■□□□□ 0.15
YBX3-201ENST00000228251 F2RL1P55085 397 aa16.01■□□□□ 0.15
YBX3-201ENST00000228251 KLF3P57682 345 aaPredicted RBP16.01■□□□□ 0.15
YBX3-201ENST00000228251 BAXQ07812 192 aa16.01■□□□□ 0.15
YBX3-201ENST00000228251 DOLPP1Q86YN1 238 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms