RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 SPINT2O43291 252 aa12.77□□□□□ -0.36
UBE2D4-201ENST00000222402 MDH2P40926 338 aaKnown RBP12.77□□□□□ -0.36
UBE2D4-201ENST00000222402 CEBPDP49716 269 aaPredicted RBP12.77□□□□□ -0.36
UBE2D4-201ENST00000222402 NKX6-1P78426 367 aaPredicted RBP12.77□□□□□ -0.36
UBE2D4-201ENST00000222402 HFEQ30201 348 aa12.77□□□□□ -0.36
UBE2D4-201ENST00000222402 ZNF98A6NK75 572 aa12.77□□□□□ -0.37
UBE2D4-201ENST00000222402 ERVK-16P61578 105 aa12.77□□□□□ -0.37
UBE2D4-201ENST00000222402 FABP9Q0Z7S8 132 aa12.77□□□□□ -0.37
UBE2D4-201ENST00000222402 ZNF718Q3SXZ3 478 aa12.77□□□□□ -0.37
UBE2D4-201ENST00000222402 NANPQ8TBE9 248 aa12.77□□□□□ -0.37
UBE2D4-201ENST00000222402 RSG1Q9BU20 258 aa12.77□□□□□ -0.37
UBE2D4-201ENST00000222402 RYDENQ9NUL5 291 aaKnown RBP12.77□□□□□ -0.37
UBE2D4-201ENST00000222402 DUXBA0A1W2PPF3 345 aa12.77□□□□□ -0.37
UBE2D4-201ENST00000222402 TRIP6Q15654 476 aaKnown RBP12.77□□□□□ -0.37
UBE2D4-201ENST00000222402 ADIRFQ15847 76 aa12.77□□□□□ -0.37
UBE2D4-201ENST00000222402 SARAFQ96BY9 339 aa12.77□□□□□ -0.37
UBE2D4-201ENST00000222402 OR5B12Q96R08 314 aa12.77□□□□□ -0.37
UBE2D4-201ENST00000222402 IGKV3D-15A0A087WSY6 115 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 A0A1B0GU03 582 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 IFNA4P05014 189 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 ZNF826PQ6ZT77 177 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 LRTM2Q8N967 370 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 SCCPDHQ8NBX0 429 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 OR5D13Q8NGL4 314 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 ABHD14AQ9BUJ0 271 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 ENY2Q9NPA8 101 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 RFNGQ9Y644 331 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 EYSQ5T1H1 3165 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 HAND1O96004 215 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 IFNA10P01566 189 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 SP9P0CG40 484 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 S100PP25815 95 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 ERVS71-1P61550 626 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 SPINK9Q5DT21 86 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 RBMS3Q6XE24 437 aaKnown RBP12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 LINC00596Q86U02 117 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 TPRX1Q8N7U7 411 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 SPSB4Q96A44 273 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 TVP23CQ96ET8 276 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 MSL2Q9HCI7 577 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 ZNF727A8MUV8 499 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 UCP1P25874 307 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 DEFB109BQ30KR1 87 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 BTNL3Q6UXE8 466 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 ASCL4Q6XD76 172 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 LINC00518Q8N0U6 118 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 GUCD1Q96NT3 240 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 TCEAL7Q9BRU2 100 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 VCANP13611 3396 aa12.76□□□□□ -0.37
UBE2D4-201ENST00000222402 EIF3GO75821 320 aaKnown RBP eCLIP12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 AESQ08117 197 aa12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 SLC38A11Q08AI6 406 aa12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 OR10P1Q8NGE3 313 aa12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 PROB1E7EW31 1015 aa12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 H3BQ15 152 aa12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 LILRA1O75019 489 aa12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 IGHV3-13P01766 116 aa12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 IGHV3-7P01780 117 aa12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 RAB5AP20339 215 aa12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 IL15RAQ13261 267 aa12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 RNF122Q9H9V4 155 aa12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 HEATR1Q9H583 2144 aaKnown RBP12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 C9JQL5 133 aa12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 HOXA1P49639 335 aaPredicted RBP12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 CYB561D1Q8N8Q1 229 aa12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 DEFB124Q8NES8 71 aa12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 MRPL30Q8TCC3 161 aaKnown RBP12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 RPUSD4Q96CM3 377 aaKnown RBP12.75□□□□□ -0.37
UBE2D4-201ENST00000222402 A0A1W2PPV4 95 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 CD5P06127 495 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 CELA3BP08861 270 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 PDZD11Q5EBL8 140 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 OR4D5Q8NGN0 318 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 HEYLQ9NQ87 328 aaPredicted RBP12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 KIAA1456Q9P272 454 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 PSG11Q9UQ72 335 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 SMIM21Q3B7S5 101 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 PRAMEF6Q5VXH4 476 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 SLC16A13Q7RTY0 426 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 POM121Q96HA1 1249 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 GMPPAQ96IJ6 420 aaPredicted RBP12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 TMEM56Q96MV1 263 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 PKIBQ9C010 78 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 TMEM56-RWDD3S4R434 201 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 NKX2-8O15522 239 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 CYB5BO43169 146 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 FBP1P09467 338 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 ZNF883P0CG24 379 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 MEOX2P50222 304 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 TAS2R30P59541 319 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 RND3P61587 244 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 MZT1Q08AG7 82 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 Q3ZCU0 254 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 PRAMEF5Q5TYX0 476 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 CST9LP1Q5W188 147 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 OR2Z1Q8NG97 314 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 HIST1H2BAQ96A08 127 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 MUCL1Q96DR8 90 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 CRIM1Q9NZV1 1036 aa12.74□□□□□ -0.37
UBE2D4-201ENST00000222402 TECTAO75443 2155 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms