RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 VAMP3Q15836 100 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 FAM209AQ5JX71 171 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 OR4A5Q8NH83 315 aa16.43■□□□□ 0.22
SMPD3-201ENST00000219334 TFPI2P48307 235 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 ZPLD1Q8TCW7 415 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 METTL1Q9UBP6 276 aaKnown RBP16.42■□□□□ 0.22
SMPD3-201ENST00000219334 TMEM229AB2RXF0 380 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 CRHP06850 196 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 PCOLCEQ15113 449 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 HOGA1Q86XE5 327 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 VAMP8Q9BV40 100 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 GHITMQ9H3K2 345 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 TRIP11Q15643 1979 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 HNRNPA3P51991 378 aaKnown RBP16.42■□□□□ 0.22
SMPD3-201ENST00000219334 LRRC75BQ2VPJ9 315 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 ZNF638Q14966 1978 aaKnown RBP16.42■□□□□ 0.22
SMPD3-201ENST00000219334 RBFOX3A6NFN3 312 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 NAT8Q9UHE5 227 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 FAM186AA6NE01 2351 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 MFSD2BA6NFX1 497 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 HMSDA8MTL9 139 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 MFNGO00587 321 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 CCKARP32238 428 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 RNF212Q495C1 297 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 UNQ5815/PRO19632Q6UWF5 114 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 CLEC9AQ6UXN8 241 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 LYZL2Q7Z4W2 148 aa16.42■□□□□ 0.22
SMPD3-201ENST00000219334 SYNGR3O43761 229 aa16.41■□□□□ 0.22
SMPD3-201ENST00000219334 HYPMO75409 117 aa16.41■□□□□ 0.22
SMPD3-201ENST00000219334 AREGP15514 252 aa16.41■□□□□ 0.22
SMPD3-201ENST00000219334 BSXQ3C1V8 233 aa16.41■□□□□ 0.22
SMPD3-201ENST00000219334 ZNF826PQ6ZT77 177 aa16.41■□□□□ 0.22
SMPD3-201ENST00000219334 OR10G8Q8NGN5 311 aa16.41■□□□□ 0.22
SMPD3-201ENST00000219334 PPIAL4CA0A0B4J2A2 164 aa16.41■□□□□ 0.22
SMPD3-201ENST00000219334 CSN3P07498 182 aa16.41■□□□□ 0.22
SMPD3-201ENST00000219334 PPIAL4GP0DN37 164 aa16.41■□□□□ 0.22
SMPD3-201ENST00000219334 ELOVL5Q9NYP7 299 aa16.41■□□□□ 0.22
SMPD3-201ENST00000219334 RIPPLY2Q5TAB7 128 aa16.41■□□□□ 0.22
SMPD3-201ENST00000219334 SLC25A47Q6Q0C1 308 aa16.41■□□□□ 0.22
SMPD3-201ENST00000219334 FDCSPQ8NFU4 85 aa16.41■□□□□ 0.22
SMPD3-201ENST00000219334 HDHD3Q9BSH5 251 aaPredicted RBP16.41■□□□□ 0.22
SMPD3-201ENST00000219334 UBR3Q6ZT12 1888 aa16.41■□□□□ 0.22
SMPD3-201ENST00000219334 OR2H2O95918 312 aa16.41■□□□□ 0.22
SMPD3-201ENST00000219334 MMD2Q8IY49 270 aa16.41■□□□□ 0.22
SMPD3-201ENST00000219334 BMPR1BO00238 502 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 NAT2P11245 290 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 TMEM50BP56557 158 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 SLC35E3Q7Z769 313 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 NUP37Q8NFH4 326 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 OR10C1Q96KK4 312 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 PCM1Q15154 2024 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 RRN3P1Q2M238 152 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 C10orf111Q8N326 155 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 ADIPOR1Q96A54 375 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 PTX4Q96A99 478 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 PRSS27Q9BQR3 290 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 SMAGPQ0VAQ4 97 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 TOMM20LQ6UXN7 152 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 GPA33Q99795 319 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 RCC2Q9P258 522 aaKnown RBP16.4■□□□□ 0.22
SMPD3-201ENST00000219334 CORTO00230 105 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 PNRC1Q12796 327 aaPredicted RBP16.4■□□□□ 0.22
SMPD3-201ENST00000219334 LAMTOR1Q6IAA8 161 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 METTL26Q96S19 204 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 LPAR5Q9H1C0 372 aa16.4■□□□□ 0.22
SMPD3-201ENST00000219334 FCGR3AP08637 254 aa16.39■□□□□ 0.22
SMPD3-201ENST00000219334 COX19Q49B96 90 aa16.39■□□□□ 0.22
SMPD3-201ENST00000219334 MUC15Q8N387 334 aa16.39■□□□□ 0.22
SMPD3-201ENST00000219334 KLHDC2Q9Y2U9 406 aa16.39■□□□□ 0.22
SMPD3-201ENST00000219334 CRXO43186 299 aaPredicted RBP16.39■□□□□ 0.21
SMPD3-201ENST00000219334 SS18L1O75177 396 aaPredicted RBP16.39■□□□□ 0.21
SMPD3-201ENST00000219334 WNT5AP41221 380 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 TCL1AP56279 114 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 HERVK_113P61574 105 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 EWSR1Q01844 656 aaKnown RBP eCLIP16.39■□□□□ 0.21
SMPD3-201ENST00000219334 PCSK4Q6UW60 755 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 STPG3Q8N7X2 389 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 SPSB2Q99619 263 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 LOC105371242A0A075B767 164 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 PHOX2AO14813 284 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 FOXH1O75593 365 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 ARF6P62330 175 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 GUCD1Q96NT3 240 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 CASP8AP2Q9UKL3 1982 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 DHRS7CA6NNS2 312 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 B9A039 149 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 CXorf1O96002 111 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 MELTFP08582 738 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 IFI6P09912 130 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 FAM210BQ96KR6 192 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 OR4C12Q96R67 309 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 KCNK17Q96T54 332 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 HELTA6NFD8 242 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 RNFT1Q5M7Z0 435 aa16.39■□□□□ 0.21
SMPD3-201ENST00000219334 TM4SF20Q53R12 229 aa16.38■□□□□ 0.21
SMPD3-201ENST00000219334 SPANXN1Q5VSR9 72 aa16.38■□□□□ 0.21
SMPD3-201ENST00000219334 CYB5R3P00387 301 aaPredicted RBP16.38■□□□□ 0.21
SMPD3-201ENST00000219334 PPP1R32Q7Z5V6 425 aa16.38■□□□□ 0.21
SMPD3-201ENST00000219334 LAMB2P55268 1798 aa16.38■□□□□ 0.21
SMPD3-201ENST00000219334 ZNF318Q5VUA4 2279 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms