RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 CDX1P47902 265 aaPredicted RBP3.86□□□□□ -1.79
CHD9-201ENST00000219084 CCL11P51671 97 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 NXPH1P58417 271 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 SMAD2Q15796 467 aaKnown RBP3.86□□□□□ -1.79
CHD9-201ENST00000219084 ACER2Q5QJU3 275 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 SAMD13Q5VXD3 122 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 ZNF660Q6AZW8 331 aaPredicted RBP3.86□□□□□ -1.79
CHD9-201ENST00000219084 DHRS11Q6UWP2 260 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 GAPTQ8N292 157 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 ADIPOR1Q96A54 375 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 TMEM45BQ96B21 275 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 STARD4Q96DR4 205 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 SCARF2Q96GP6 870 aaPredicted RBP3.86□□□□□ -1.79
CHD9-201ENST00000219084 MARS2Q96GW9 593 aaKnown RBP3.86□□□□□ -1.79
CHD9-201ENST00000219084 SMIM8Q96KF7 97 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 PRDM14Q9GZV8 571 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 ZDHHC8Q9ULC8 765 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 A8MXK9 166 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 VSIG8P0DPA2 414 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 S100A4P26447 101 aaKnown RBP3.86□□□□□ -1.79
CHD9-201ENST00000219084 CD226Q15762 336 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 CALHM1Q8IU99 346 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 RPEQ96AT9 228 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 NPVFQ9HCQ7 196 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 TREM2Q9NZC2 230 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 G3V3Y1 287 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 FCGR3BO75015 233 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 FAM157BP0CG42 384 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 NPY1RP25929 384 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 ZFP36L2P47974 494 aaKnown RBP3.86□□□□□ -1.79
CHD9-201ENST00000219084 SPATA46Q5T0L3 261 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 PRR27Q6MZM9 219 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 ZNF721Q8TF20 911 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 RASL11BQ9BPW5 248 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 SLC7A10Q9NS82 523 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 OBSL1O75147 1896 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 IGHV5-51A0A0C4DH38 117 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 FCGR3AP08637 254 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 CXCL2P19875 107 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 FCER1GP30273 86 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 Q1RN00 199 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 IZUMO4Q1ZYL8 232 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 BHLHA15Q7RTS1 189 aaPredicted RBP3.86□□□□□ -1.79
CHD9-201ENST00000219084 OR4D11Q8NGI4 311 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 CCL4L1Q8NHW4 92 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 ZNF519Q8TB69 540 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 MRPL30Q8TCC3 161 aaKnown RBP3.86□□□□□ -1.79
CHD9-201ENST00000219084 ZNF775Q96BV0 537 aaPredicted RBP3.86□□□□□ -1.79
CHD9-201ENST00000219084 SLC25A33Q9BSK2 321 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 KCNE5Q9UJ90 142 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 PSG11Q9UQ72 335 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 DOCK7Q96N67 2140 aa3.86□□□□□ -1.79
CHD9-201ENST00000219084 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.85□□□□□ -1.79
CHD9-201ENST00000219084 ZNF785A8K8V0 405 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 NPIPB9F8W1W9 429 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 CA6P23280 308 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 MC5RP33032 325 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 G6PCP35575 357 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 PMP22Q01453 160 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 FZD5Q13467 585 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 INSL4Q14641 139 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 TCTN1Q2MV58 587 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 LINC01559Q495D7 138 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 C16orf82Q7Z2V1 217 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 VASH2Q86V25 355 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 OR1P1Q8NH06 330 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 DUSP15Q9H1R2 295 aaPredicted RBP3.85□□□□□ -1.79
CHD9-201ENST00000219084 TRAV8-7A0A075B6U6 113 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 TNFSF15O95150 251 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 DAOP14920 347 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 CD1BP29016 333 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 LGALS7P47929 136 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 RND3P61587 244 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 P2RY6Q15077 328 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 SP6Q3SY56 376 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 TMEM255AQ5JRV8 349 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 ZNF383Q8NA42 475 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 CLEC1BQ9P126 229 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 CEP192Q8TEP8 1941 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 DIRC3C9JPN6 131 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 CLDN14O95500 239 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 FAM87AP0C7U9 286 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 PRF1P14222 555 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 DDTP30046 118 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 RPS4XP62701 263 aaKnown RBP3.85□□□□□ -1.79
CHD9-201ENST00000219084 TNFAIP6P98066 277 aaPredicted RBP3.85□□□□□ -1.79
CHD9-201ENST00000219084 SMUG1Q53HV7 270 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 TGIF2LYQ8IUE0 185 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 LINC00518Q8N0U6 118 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 ADAD2Q8NCV1 583 aaKnown RBP3.85□□□□□ -1.79
CHD9-201ENST00000219084 MYOZ3Q8TDC0 251 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 PTPMT1Q8WUK0 201 aaPredicted RBP3.85□□□□□ -1.79
CHD9-201ENST00000219084 SNRNP40Q96DI7 357 aaKnown RBP3.85□□□□□ -1.79
CHD9-201ENST00000219084 RASL10BQ96S79 203 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 PRSS27Q9BQR3 290 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 GPR132Q9UNW8 380 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 NCOA6Q14686 2063 aaPredicted RBP3.85□□□□□ -1.79
CHD9-201ENST00000219084 NDUFA2O43678 99 aa3.85□□□□□ -1.79
CHD9-201ENST00000219084 MUC1P15941 1255 aaPredicted RBP3.85□□□□□ -1.79
CHD9-201ENST00000219084 RPL30P62888 115 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms