RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 TMEM68Q96MH6 324 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 IGKV1-9A0A0C4DH69 117 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 LDLRAD4O15165 306 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 SLC31A2O15432 143 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 DEDDO75618 318 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 FUT3P21217 361 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 HNRNPA3P51991 378 aaKnown RBP12.91□□□□□ -0.34
SRRD-201ENST00000215917 SRPXP78539 464 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 RFPL3SP0C7P2 107 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 APLNRP35414 380 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 TFPI2P48307 235 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 FFAR4Q5NUL3 377 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 PEAR1Q5VY43 1037 aaPredicted RBP12.91□□□□□ -0.34
SRRD-201ENST00000215917 OR4C5Q8NGB2 326 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 AQP10Q96PS8 301 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 UHRF2Q96PU4 802 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 SRXN1Q9BYN0 137 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 CTDSP1Q9GZU7 261 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 IGHV3-43A0A0B4J1X8 118 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 FCN1O00602 326 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 DEGS1O15121 323 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 SYNGR4O95473 234 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 SEC11BP0C7V7 166 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 IGHV3-43DP0DP04 118 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 LIFP15018 202 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 DTYMKP23919 212 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 TRA2AQ13595 282 aaKnown RBP eCLIP12.91□□□□□ -0.34
SRRD-201ENST00000215917 EXT1Q16394 746 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 SNAI3Q3KNW1 292 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 Q6ZN92 141 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 CT55Q8WUE5 264 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 NAT8BQ9UHF3 227 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 TCFL5Q9UL49 500 aa12.91□□□□□ -0.34
SRRD-201ENST00000215917 CHD3Q12873 2000 aaKnown RBP12.9□□□□□ -0.34
SRRD-201ENST00000215917 ZNF732B4DXR9 585 aa12.9□□□□□ -0.34
SRRD-201ENST00000215917 F6UZH7 168 aa12.9□□□□□ -0.34
SRRD-201ENST00000215917 SOD3P08294 240 aa12.9□□□□□ -0.34
SRRD-201ENST00000215917 CXCL1P09341 107 aa12.9□□□□□ -0.34
SRRD-201ENST00000215917 ZNF17P17021 662 aa12.9□□□□□ -0.34
SRRD-201ENST00000215917 TMEM50BP56557 158 aa12.9□□□□□ -0.34
SRRD-201ENST00000215917 PPP1CBP62140 327 aa12.9□□□□□ -0.34
SRRD-201ENST00000215917 DNM1P46Q6ZS02 220 aa12.9□□□□□ -0.34
SRRD-201ENST00000215917 DTX1Q86Y01 620 aa12.9□□□□□ -0.34
SRRD-201ENST00000215917 OR10V1Q8NGI7 309 aa12.9□□□□□ -0.34
SRRD-201ENST00000215917 ZNF596Q8TC21 504 aa12.9□□□□□ -0.34
SRRD-201ENST00000215917 UTP23Q9BRU9 249 aaKnown RBP12.9□□□□□ -0.34
SRRD-201ENST00000215917 PPYP01298 95 aa12.9□□□□□ -0.34
SRRD-201ENST00000215917 CTSDP07339 412 aaPredicted RBP12.9□□□□□ -0.34
SRRD-201ENST00000215917 DHRS13Q6UX07 377 aa12.9□□□□□ -0.34
SRRD-201ENST00000215917 OR10P1Q8NGE3 313 aa12.9□□□□□ -0.34
SRRD-201ENST00000215917 TMED3Q9Y3Q3 217 aa12.9□□□□□ -0.34
SRRD-201ENST00000215917 COL5A1P20908 1838 aaPredicted RBP12.9□□□□□ -0.34
SRRD-201ENST00000215917 LOC102723996A0A087X1L8 192 aa12.9□□□□□ -0.35
SRRD-201ENST00000215917 MPPED1O15442 326 aa12.9□□□□□ -0.35
SRRD-201ENST00000215917 ZNF32P17041 273 aa12.9□□□□□ -0.35
SRRD-201ENST00000215917 WNT5AP41221 380 aa12.9□□□□□ -0.35
SRRD-201ENST00000215917 ERVFC1-1P60608 527 aa12.9□□□□□ -0.35
SRRD-201ENST00000215917 OR7C2O60412 319 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 DSCR4P56555 118 aaPredicted RBP12.89□□□□□ -0.35
SRRD-201ENST00000215917 Q0VFX4 171 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 PRR31Q5SQ13 230 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 SPINK14Q6IE38 97 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 C6orf15Q6UXA7 325 aaPredicted RBP12.89□□□□□ -0.35
SRRD-201ENST00000215917 LINC00696Q6ZRV3 163 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 ZNF586Q9NXT0 402 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 PITPNC1Q9UKF7 332 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 CPAMD8Q8IZJ3 1885 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 IGKV1D-8A0A087WSZ0 117 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 C20orf202A1L168 122 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 FAM166BA8MTA8 275 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 C3orf80F5H4A9 247 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 HIST1H2BKO60814 126 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 DHRS3O75911 302 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 HIST1H2BJP06899 126 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 DEFA4P12838 97 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 HIST1H2BOP23527 126 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 HIST1H2BBP33778 126 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 HIST1H2BDP58876 126 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 HIST1H2BCP62807 126 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 MSMO1Q15800 293 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 HIST2H2BEQ16778 126 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.89□□□□□ -0.35
SRRD-201ENST00000215917 REC114Q7Z4M0 266 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 NANOS1Q8WY41 292 aaKnown RBP12.89□□□□□ -0.35
SRRD-201ENST00000215917 HIST1H2BHQ93079 126 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 HIST1H2BNQ99877 126 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 HIST1H2BMQ99879 126 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 TECRQ9NZ01 308 aaKnown RBP12.89□□□□□ -0.35
SRRD-201ENST00000215917 FOXJ2Q9P0K8 574 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 RPP30P78346 268 aaKnown RBP12.89□□□□□ -0.35
SRRD-201ENST00000215917 FAM3AP98173 230 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 GTF3C1Q12789 2109 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 PPP1R32Q7Z5V6 425 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 C11orf42Q8N5U0 333 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 POC1AQ8NBT0 407 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 LYZL4Q96KX0 146 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 AUP1Q9Y679 476 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 MED13Q9UHV7 2174 aa12.89□□□□□ -0.35
SRRD-201ENST00000215917 TMEM14DPA8MWL7 114 aa12.88□□□□□ -0.35
SRRD-201ENST00000215917 HSBP1L1C9JCN9 74 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms