RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 MOB3AQ96BX8 217 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 MRGPRX3Q96LB0 322 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 HDHD3Q9BSH5 251 aaPredicted RBP9.13□□□□□ -0.95
VCL-201ENST00000211998 IGHV1OR21-1A0A087WYE8 117 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 PLPP3O14495 311 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 DNPH1O43598 174 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 GPX4P36969 197 aaPredicted RBP9.13□□□□□ -0.95
VCL-201ENST00000211998 SRSF3P84103 164 aaKnown RBP9.13□□□□□ -0.95
VCL-201ENST00000211998 RIPPLY2Q5TAB7 128 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 LIMS2Q7Z4I7 341 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 NUDT10Q8NFP7 164 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 PMCHL2Q9BQD1 86 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 ASCL3Q9NQ33 180 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 OR2W1Q9Y3N9 320 aa9.13□□□□□ -0.95
VCL-201ENST00000211998 IGHV3-43A0A0B4J1X8 118 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 A0A1W2PPC1 479 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 IGHV3-43DP0DP04 118 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 PSG2P11465 335 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 SCGB1A1P11684 91 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 TFPI2P48307 235 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 IBA57Q5T440 356 aaKnown RBP9.12□□□□□ -0.95
VCL-201ENST00000211998 ANKRD37Q7Z713 158 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 HIST1H4GQ99525 98 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 MYOZ1Q9NP98 299 aaPredicted RBP9.12□□□□□ -0.95
VCL-201ENST00000211998 NUP214P35658 2090 aaPredicted RBP9.12□□□□□ -0.95
VCL-201ENST00000211998 RREB1Q92766 1687 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 VMA21Q3ZAQ7 101 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 GUSBP11Q6P575 273 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 SLC36A1Q7Z2H8 476 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 FAM169BQ8N8A8 192 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 OR1B1Q8NGR6 318 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 R3HDM4Q96D70 268 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 SLC25A33Q9BSK2 321 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 MEGF9Q9H1U4 602 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 ALG1L2C9J202 215 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 H7C2G1 150 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 PRICKLE4Q2TBC4 344 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 WIPI1Q5MNZ9 446 aaPredicted RBP9.12□□□□□ -0.95
VCL-201ENST00000211998 RBKSQ9H477 322 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.12□□□□□ -0.95
VCL-201ENST00000211998 F5H697 171 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 CTSSP25774 331 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 BMI1P35226 326 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 PRSS12P56730 875 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 KLHDC2Q9Y2U9 406 aa9.12□□□□□ -0.95
VCL-201ENST00000211998 TNRC6CQ9HCJ0 1690 aaKnown RBP9.11□□□□□ -0.95
VCL-201ENST00000211998 M0R3E3 92 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 KLK10O43240 276 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 KIR3DL2P43630 455 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 NXPH1P58417 271 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 C2orf68Q2NKX9 166 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 ZNF260Q3ZCT1 412 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 ZNF774Q6NX45 483 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 ZNF519Q8TB69 540 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 ST6GALNAC6Q969X2 333 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 GABRG3Q99928 467 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 TMEM38BQ9NVV0 291 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 MARCH11A6NNE9 402 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 CBLN1P23435 193 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 HES3Q5TGS1 186 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 TMEM211Q6ICI0 200 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 M0R296 226 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 TGIF2LYQ8IUE0 185 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 CLN8Q9UBY8 286 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 PCOLCE2Q9UKZ9 415 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 SPCS1Q9Y6A9 102 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 SLC25A17O43808 307 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 RAMP1O60894 148 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 KBTBD11O94819 623 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 CLDN18P56856 261 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 GGTLC2Q14390 218 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 JOSD1Q15040 202 aaPredicted RBP9.11□□□□□ -0.95
VCL-201ENST00000211998 ZNF141Q15928 474 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 PLA2G2FQ9BZM2 168 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 PRRC2BQ5JSZ5 2229 aaKnown RBP9.11□□□□□ -0.95
VCL-201ENST00000211998 IGHV1OR15-9A0A0B4J2B8 117 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 GDF9O60383 454 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 TBX6O95947 436 aaPredicted RBP9.11□□□□□ -0.95
VCL-201ENST00000211998 CA1P00915 261 aaPredicted RBP9.11□□□□□ -0.95
VCL-201ENST00000211998 LINC00614P0C842 121 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 ARF6P62330 175 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 CALHM1Q8IU99 346 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 ZDHHC16Q969W1 377 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 QTRT1Q9BXR0 403 aaKnown RBP9.11□□□□□ -0.95
VCL-201ENST00000211998 TBL2Q9Y4P3 447 aaKnown RBP9.11□□□□□ -0.95
VCL-201ENST00000211998 SDK1Q7Z5N4 2213 aa9.11□□□□□ -0.95
VCL-201ENST00000211998 EVPLQ92817 2033 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 A0A087WWC5 75 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 C1QL3Q5VWW1 255 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 CBLN3Q6UW01 205 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 CXorf67Q86X51 503 aaPredicted RBP9.1□□□□□ -0.95
VCL-201ENST00000211998 ZPLD1Q8TCW7 415 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 HIST1H2BKO60814 126 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 HIST1H2BJP06899 126 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 MYF5P13349 255 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 HIST1H2BOP23527 126 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 HIST1H2BBP33778 126 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 METAP1P53582 386 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 HIST1H2BDP58876 126 aa9.1□□□□□ -0.95
VCL-201ENST00000211998 HIST1H2BCP62807 126 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms