RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 OR2Z1Q8NG97 314 aa6.96□□□□□ -1.29
VAMP3-201ENST00000054666 OR8U1Q8NH10 309 aa6.96□□□□□ -1.29
VAMP3-201ENST00000054666 LRRC29Q8WV35 223 aa6.96□□□□□ -1.29
VAMP3-201ENST00000054666 BSCL2Q96G97 398 aaPredicted RBP6.96□□□□□ -1.29
VAMP3-201ENST00000054666 DUSP13Q9UII6 198 aa6.96□□□□□ -1.29
VAMP3-201ENST00000054666 STRAPQ9Y3F4 350 aaKnown RBP6.96□□□□□ -1.29
VAMP3-201ENST00000054666 FAM215AQ9Y5M1 114 aa6.96□□□□□ -1.29
VAMP3-201ENST00000054666 IGSF23A1L1A6 192 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 NXPH3O95157 252 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 PTBP3O95758 552 aaKnown RBP6.96□□□□□ -1.3
VAMP3-201ENST00000054666 TSPAN15O95858 294 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 HEXAP06865 529 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 SPP1P10451 314 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 OMGP23515 440 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 RPL23AP62750 156 aaKnown RBP6.96□□□□□ -1.3
VAMP3-201ENST00000054666 ID3Q02535 119 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 CATR1Q13166 79 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 C3orf36Q3SXR2 165 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 TRAT1Q6PIZ9 186 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 C11orf53Q8IXP5 236 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 TMEM252Q8N6L7 170 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 ZNF645Q8N7E2 425 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 ZBTB34Q8NCN2 500 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 PPP1R35Q8TAP8 253 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 LSM10Q969L4 123 aaKnown RBP6.96□□□□□ -1.3
VAMP3-201ENST00000054666 C11orf1Q9H5F2 150 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 TMEM231Q9H6L2 316 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 WFDC1Q9HC57 220 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 WASF3Q9UPY6 502 aa6.96□□□□□ -1.3
VAMP3-201ENST00000054666 LOC400499M0QZD8 3231 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 C12orf77C9JDV5 145 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 SIGLEC5O15389 551 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 HBZP02008 142 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 DANCRP0C864 163 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 KLF3P57682 345 aaPredicted RBP6.95□□□□□ -1.3
VAMP3-201ENST00000054666 COL10A1Q03692 680 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 AESQ08117 197 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 ZNF474Q6S9Z5 364 aaPredicted RBP6.95□□□□□ -1.3
VAMP3-201ENST00000054666 BTNL8Q6UX41 500 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 COMMD1Q8N668 190 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 DRAM1Q8N682 238 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 OR10Z1Q8NGY1 313 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 OR1L1Q8NH94 360 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 FAM57AQ8TBR7 257 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 RAB40CQ96S21 281 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 SEC11CQ9BY50 192 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 OR2D2Q9H210 308 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 UQCC1Q9NVA1 299 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 CACNG5Q9UF02 275 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 HEATR1Q9H583 2144 aaKnown RBP6.95□□□□□ -1.3
VAMP3-201ENST00000054666 RIF1Q5UIP0 2472 aaKnown RBP6.95□□□□□ -1.3
VAMP3-201ENST00000054666 A0A1B0GWJ7 208 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 C1QTNF9BB2RNN3 333 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 TRIM77I1YAP6 450 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 AGPAT2O15120 278 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 SPINT2O43291 252 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 CHST1O43916 411 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 SNAPINO95295 136 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 IGLV2-14P01704 120 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 MUC1P15941 1255 aaPredicted RBP6.95□□□□□ -1.3
VAMP3-201ENST00000054666 GLRXP35754 106 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 SELENOVP59797 346 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 ZNF273Q14593 569 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 MIDNQ504T8 468 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 TMEM182Q6ZP80 229 aaPredicted RBP6.95□□□□□ -1.3
VAMP3-201ENST00000054666 RPRMLQ8N4K4 120 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 OR5C1Q8NGR4 320 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 MRGPRDQ8TDS7 321 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 GPR146Q96CH1 333 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 COQ2Q96H96 371 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 C19orf12Q9NSK7 152 aa6.95□□□□□ -1.3
VAMP3-201ENST00000054666 CARHSP1Q9Y2V2 147 aaKnown RBP6.95□□□□□ -1.3
VAMP3-201ENST00000054666 A0A0G2JRQ6 117 aa6.94□□□□□ -1.3
VAMP3-201ENST00000054666 PROB1E7EW31 1015 aa6.94□□□□□ -1.3
VAMP3-201ENST00000054666 PRRG2O14669 202 aa6.94□□□□□ -1.3
VAMP3-201ENST00000054666 DFFBO76075 338 aa6.94□□□□□ -1.3
VAMP3-201ENST00000054666 CST7O76096 145 aa6.94□□□□□ -1.3
VAMP3-201ENST00000054666 IGHV3-13P01766 116 aa6.94□□□□□ -1.3
VAMP3-201ENST00000054666 ADCYAP1P18509 176 aa6.94□□□□□ -1.3
VAMP3-201ENST00000054666 ATF4P18848 351 aaPredicted RBP6.94□□□□□ -1.3
VAMP3-201ENST00000054666 DYNLT3P51808 116 aa6.94□□□□□ -1.3
VAMP3-201ENST00000054666 ARHGDIBP52566 201 aa6.94□□□□□ -1.3
VAMP3-201ENST00000054666 DVL1P1P54792 670 aaPredicted RBP6.94□□□□□ -1.3
VAMP3-201ENST00000054666 SLC25A24Q6NUK1 477 aa6.94□□□□□ -1.3
VAMP3-201ENST00000054666 VHLLQ6RSH7 139 aa6.94□□□□□ -1.3
VAMP3-201ENST00000054666 ATRAIDQ6UW56 229 aa6.94□□□□□ -1.3
VAMP3-201ENST00000054666 FAM90A1Q86YD7 464 aa6.94□□□□□ -1.3
VAMP3-201ENST00000054666 TMEM217Q8N7C4 229 aa6.94□□□□□ -1.3
VAMP3-201ENST00000054666 GNPNAT1Q96EK6 184 aaPredicted RBP6.94□□□□□ -1.3
VAMP3-201ENST00000054666 PARP12Q9H0J9 701 aaKnown RBP6.94□□□□□ -1.3
VAMP3-201ENST00000054666 SH3BGRL3Q9H299 93 aa6.94□□□□□ -1.3
VAMP3-201ENST00000054666 FAM96BQ9Y3D0 163 aa6.94□□□□□ -1.3
VAMP3-201ENST00000054666 SRRM5B3KS81 715 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 UMAD1C9J7I0 102 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 RNASEK-C17orf49H0YIS7 233 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 NUPL2O15504 423 aaKnown RBP6.93□□□□□ -1.3
VAMP3-201ENST00000054666 SFTA3P0C7M3 94 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 BMP5P22003 454 aa6.93□□□□□ -1.3
VAMP3-201ENST00000054666 CEACAM8P31997 349 aaPredicted RBP6.93□□□□□ -1.3
VAMP3-201ENST00000054666 CD80P33681 288 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms