RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 RBMS3Q6XE24 437 aaKnown RBP7.74□□□□□ -1.17
PHGDH-228ENST00000641847 Q6ZPA2 131 aa7.74□□□□□ -1.17
PHGDH-228ENST00000641847 MOB1BQ7L9L4 216 aa7.74□□□□□ -1.17
PHGDH-228ENST00000641847 HOGA1Q86XE5 327 aa7.74□□□□□ -1.17
PHGDH-228ENST00000641847 FAM185AQ8N0U4 392 aa7.74□□□□□ -1.17
PHGDH-228ENST00000641847 GVQW1Q8N7I0 195 aa7.74□□□□□ -1.17
PHGDH-228ENST00000641847 TRIM63Q969Q1 353 aa7.74□□□□□ -1.17
PHGDH-228ENST00000641847 TMEM186Q96B77 213 aa7.74□□□□□ -1.17
PHGDH-228ENST00000641847 THAP7Q9BT49 309 aaPredicted RBP7.74□□□□□ -1.17
PHGDH-228ENST00000641847 ST6GALNAC5Q9BVH7 336 aa7.74□□□□□ -1.17
PHGDH-228ENST00000641847 SSBP3Q9BWW4 388 aaPredicted RBP7.74□□□□□ -1.17
PHGDH-228ENST00000641847 ZNF286AQ9HBT8 521 aa7.74□□□□□ -1.17
PHGDH-228ENST00000641847 Q9N2K0 584 aa7.74□□□□□ -1.17
PHGDH-228ENST00000641847 HIF1ANQ9NWT6 349 aa7.74□□□□□ -1.17
PHGDH-228ENST00000641847 MTFP1Q9UDX5 166 aa7.74□□□□□ -1.17
PHGDH-228ENST00000641847 TRAPPC2LQ9UL33 140 aa7.74□□□□□ -1.17
PHGDH-228ENST00000641847 ANAPC10Q9UM13 185 aa7.74□□□□□ -1.17
PHGDH-228ENST00000641847 RBMX2Q9Y388 322 aaKnown RBP7.74□□□□□ -1.17
PHGDH-228ENST00000641847 TRBV23-1A0A0A0MS06 115 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 A0A1W2PQ09 198 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 hADV38S2A0JD32 116 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 MEX3AA1L020 520 aaKnown RBP7.73□□□□□ -1.17
PHGDH-228ENST00000641847 UPK1BO75841 260 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 RBBP9O75884 186 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 IL2RGP31785 369 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 INPP1P49441 399 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 ACTBP60709 375 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 LMO4P61968 165 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 RPL31P62899 125 aaKnown RBP7.73□□□□□ -1.17
PHGDH-228ENST00000641847 HLA-DRB3P79483 266 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 MEF2CQ06413 473 aaPredicted RBP7.73□□□□□ -1.17
PHGDH-228ENST00000641847 C6orf183Q5T699 404 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 OR52W1Q6IF63 320 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 FAHD2BQ6P2I3 314 aaPredicted RBP7.73□□□□□ -1.17
PHGDH-228ENST00000641847 ZNF880Q6PDB4 577 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 TRAT1Q6PIZ9 186 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 BTN2A1Q7KYR7 527 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 TCF23Q7RTU1 214 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 OR13A1Q8NGR1 328 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 MRGPRDQ8TDS7 321 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 SNAPC3Q92966 411 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 BORCS5Q969J3 196 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 FAHD2AQ96GK7 314 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 OCSTAMPQ9BR26 566 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 DCTN5Q9BTE1 182 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 NCOR1P1Q9H4R4 102 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 ABCB10Q9NRK6 738 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 MBNL3Q9NUK0 354 aaKnown RBP7.73□□□□□ -1.17
PHGDH-228ENST00000641847 OR6C3Q9NZP0 311 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 KLK11Q9UBX7 282 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 RYR3Q15413 4870 aa7.73□□□□□ -1.17
PHGDH-228ENST00000641847 LOC105371242A0A075B767 164 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 IGKV1D-8A0A087WSZ0 117 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 TRGV10A0A0A0MS01 117 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 KIR2DS1A0A191URI9 304 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 A8MXK9 166 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 C22orf46C9J442 243 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 C12orf77C9JDV5 145 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 FABP7O15540 132 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 ORC5O43913 435 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 ECDO95905 644 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-228ENST00000641847 MSMBP08118 114 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 CSF1P09603 554 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 HKR1P10072 659 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 NAT1P18440 290 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 RCC1P18754 421 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-228ENST00000641847 FPR2P25090 351 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 HLA-DMAP28067 261 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 SSTR5P35346 364 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 KIR2DS4P43632 304 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 TAS2R19P59542 299 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 ARPC4P59998 168 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 SSBP1Q04837 148 aaKnown RBP7.72□□□□□ -1.17
PHGDH-228ENST00000641847 ZNF273Q14593 569 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 KIR2DS1Q14954 304 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 HMGN3Q15651 99 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 SRSF7Q16629 238 aaKnown RBP eCLIP7.72□□□□□ -1.17
PHGDH-228ENST00000641847 ZNF57Q68EA5 555 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-228ENST00000641847 C16orf87Q6PH81 154 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 Q6ZS49 121 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 PRR18Q8N4B5 295 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 TMEM229BQ8NBD8 167 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 BEST4Q8NFU0 473 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 UBALD1Q8TB05 177 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 TAS2R8Q9NYW2 309 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 KCNIP1Q9NZI2 227 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 MGAT4AQ9UM21 535 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 UBE2J1Q9Y385 318 aaPredicted RBP7.72□□□□□ -1.17
PHGDH-228ENST00000641847 LINC00312Q9Y6C7 94 aa7.72□□□□□ -1.17
PHGDH-228ENST00000641847 DSCAML1Q8TD84 2053 aa7.71□□□□□ -1.17
PHGDH-228ENST00000641847 LINC00854A0A1B0GVQ3 168 aa7.71□□□□□ -1.18
PHGDH-228ENST00000641847 ANKRD20A5PA0PJZ0 165 aa7.71□□□□□ -1.18
PHGDH-228ENST00000641847 ZNF736B4DX44 427 aaPredicted RBP7.71□□□□□ -1.18
PHGDH-228ENST00000641847 TRDCB7Z8K6 153 aa7.71□□□□□ -1.18
PHGDH-228ENST00000641847 C15orf65H3BRN8 121 aa7.71□□□□□ -1.18
PHGDH-228ENST00000641847 FOXH1O75593 365 aa7.71□□□□□ -1.18
PHGDH-228ENST00000641847 SCTP09683 121 aa7.71□□□□□ -1.18
PHGDH-228ENST00000641847 GSTT2P0CG29 244 aa7.71□□□□□ -1.18
PHGDH-228ENST00000641847 GSTT2BP0CG30 244 aa7.71□□□□□ -1.18
PHGDH-228ENST00000641847 CCL3L1P16619 93 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms