RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 DIRAS3O95661 229 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 HLA-DQB1P01920 261 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 HBZP02008 142 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 RBP4P02753 201 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 IGHV4-31P0DP07 118 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 PTHLHP12272 177 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 CCL3L1P16619 93 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 RCC1P18754 421 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-218ENST00000641491 TBPP20226 339 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 ZBTB25P24278 435 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 FPR2P25090 351 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 ZFP36P26651 326 aaKnown RBP10.69□□□□□ -0.7
PHGDH-218ENST00000641491 SSTR5P35346 364 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 DGCR2P98153 550 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 ZNF273Q14593 569 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 SRSF7Q16629 238 aaKnown RBP eCLIP10.69□□□□□ -0.7
PHGDH-218ENST00000641491 RNASE10Q5GAN6 216 aaKnown RBP10.69□□□□□ -0.7
PHGDH-218ENST00000641491 PRAMEF5Q5TYX0 476 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 C16orf87Q6PH81 154 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 HOGA1Q86XE5 327 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 OR10A7Q8NGE5 316 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 GPX8Q8TED1 209 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 CORO2AQ92828 525 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 KIRREL1Q96J84 757 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 COX4I2Q96KJ9 171 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 ABHD1Q96SE0 405 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 THAP7Q9BT49 309 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-218ENST00000641491 CCDC32Q9BV29 185 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 C7orf69Q9H7B7 122 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 OR2S2Q9NQN1 319 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 ZNF69Q9UC07 566 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 SLC23A1Q9UHI7 598 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 ANXA10Q9UJ72 324 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 ELF5Q9UKW6 265 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-218ENST00000641491 KCNK7Q9Y2U2 307 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 SESN1Q9Y6P5 492 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 V9GYH0 126 aa10.69□□□□□ -0.7
PHGDH-218ENST00000641491 DISC1C4P0D8 188 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 C12orf77C9JDV5 145 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 GSTZ1O43708 216 aaPredicted RBP10.68□□□□□ -0.7
PHGDH-218ENST00000641491 INHBBP09529 407 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 IL3RAP26951 378 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 HLA-DMAP28067 261 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 CD40LGP29965 261 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 GDNFP39905 211 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 LGALS4P56470 323 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 HERV-K104P61576 105 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 SCGB2A2Q13296 93 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 MEF2DQ14814 521 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 ZNF782Q6ZMW2 699 aaPredicted RBP10.68□□□□□ -0.7
PHGDH-218ENST00000641491 RTN4RL2Q86UN3 420 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 GAPTQ8N292 157 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 GVQW1Q8N7I0 195 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 RFESDQ8TAC1 157 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 EDARADDQ8WWZ3 215 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 MSI2Q96DH6 328 aaKnown RBP10.68□□□□□ -0.7
PHGDH-218ENST00000641491 SUCNR1Q9BXA5 334 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 MBNL3Q9NUK0 354 aaKnown RBP10.68□□□□□ -0.7
PHGDH-218ENST00000641491 MCUBQ9NWR8 336 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 EHFQ9NZC4 300 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 ZNF107Q9UII5 783 aaPredicted RBP10.68□□□□□ -0.7
PHGDH-218ENST00000641491 JPT1Q9UK76 154 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 POLR3KQ9Y2Y1 108 aaPredicted RBP10.68□□□□□ -0.7
PHGDH-218ENST00000641491 INSIG2Q9Y5U4 225 aa10.68□□□□□ -0.7
PHGDH-218ENST00000641491 MEIOCA2RUB1 952 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 FAM172BPA6NC97 362 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 AKAIN1P0CW23 69 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 OMGP23515 440 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 COX7A1P24310 79 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 S100GP29377 79 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 PPP5CP53041 499 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 PRRX1P54821 245 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 DEFA1P59665 94 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 DEFA3P59666 94 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 CDK10Q15131 360 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 HMGN3Q15651 99 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 GPR157Q5UAW9 335 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 HEPN1Q6WQI6 88 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 VMO1Q7Z5L0 202 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 LY6G5BQ8NDX9 201 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 OR2AK2Q8NG84 335 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 OR5AP2Q8NGF4 316 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 OR10V1Q8NGI7 309 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 OR10X1Q8NGY0 326 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 OR1L1Q8NH94 360 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 UBALD1Q8TB05 177 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 C1orf159Q96HA4 380 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 SRRQ9GZT4 340 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 AKIP1Q9NQ31 210 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 SIRT7Q9NRC8 400 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 YAE1D1Q9NRH1 226 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 ABCB10Q9NRK6 738 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 MTFP1Q9UDX5 166 aa10.67□□□□□ -0.7
PHGDH-218ENST00000641491 AMMECR1Q9Y4X0 333 aaPredicted RBP10.67□□□□□ -0.7
PHGDH-218ENST00000641491 A0A096LNT2 108 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 SSX5O60225 188 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 RAB3DO95716 219 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 PMP2P02689 132 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 GSTT2P0CG29 244 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 IGHV1-8P0DP01 117 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms