RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 SELENOHQ8IZQ5 122 aaKnown RBP12.76□□□□□ -0.37
TRIM3-215ENST00000639856 DMBX1Q8NFW5 382 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 KIRREL1Q96J84 757 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 NRIP2Q9BQI9 281 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 ZDHHC8Q9ULC8 765 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 OR2W1Q9Y3N9 320 aa12.76□□□□□ -0.37
TRIM3-215ENST00000639856 DUXBA0A1W2PPF3 345 aa12.75□□□□□ -0.37
TRIM3-215ENST00000639856 TMEM218A2RU14 115 aa12.75□□□□□ -0.37
TRIM3-215ENST00000639856 H0YL77 283 aa12.75□□□□□ -0.37
TRIM3-215ENST00000639856 CDIPTO14735 213 aa12.75□□□□□ -0.37
TRIM3-215ENST00000639856 SIGLEC5O15389 551 aa12.75□□□□□ -0.37
TRIM3-215ENST00000639856 FBXO24O75426 580 aa12.75□□□□□ -0.37
TRIM3-215ENST00000639856 OR2H2O95918 312 aa12.75□□□□□ -0.37
TRIM3-215ENST00000639856 FAM27E3Q08E93 113 aa12.75□□□□□ -0.37
TRIM3-215ENST00000639856 PXDC1Q5TGL8 231 aa12.75□□□□□ -0.37
TRIM3-215ENST00000639856 IL34Q6ZMJ4 242 aa12.75□□□□□ -0.37
TRIM3-215ENST00000639856 C22orf34Q6ZV56 151 aa12.75□□□□□ -0.37
TRIM3-215ENST00000639856 H1FOOQ8IZA3 346 aaPredicted RBP12.75□□□□□ -0.37
TRIM3-215ENST00000639856 GPHA2Q96T91 129 aa12.75□□□□□ -0.37
TRIM3-215ENST00000639856 SPIN2AQ99865 258 aa12.75□□□□□ -0.37
TRIM3-215ENST00000639856 SPIN2BQ9BPZ2 258 aa12.75□□□□□ -0.37
TRIM3-215ENST00000639856 ZNF835Q9Y2P0 537 aa12.75□□□□□ -0.37
TRIM3-215ENST00000639856 RCL1Q9Y2P8 373 aaKnown RBP12.75□□□□□ -0.37
TRIM3-215ENST00000639856 TMEM210A6NLX4 147 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 SLC33A1O00400 549 aaPredicted RBP12.74□□□□□ -0.37
TRIM3-215ENST00000639856 GNMTQ14749 295 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 ZNF146Q15072 292 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 OR8G1Q15617 311 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 TIMM23BQ5SRD1 257 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 SHEQ5VZ18 495 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 ATRAIDQ6UW56 229 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 CLEC9AQ6UXN8 241 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 MOB1BQ7L9L4 216 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 LILRB1Q8NHL6 650 aaPredicted RBP12.74□□□□□ -0.37
TRIM3-215ENST00000639856 LRRC46Q96FV0 321 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 ARV1Q9H2C2 271 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 A8MXE2 369 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 NPIPB11E5RHQ5 1161 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 H0Y980 276 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 M0R1B8 84 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 SIRPB1O00241 398 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 ABCD4O14678 606 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 MED6O75586 246 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 PGLYRP1O75594 196 aaPredicted RBP12.74□□□□□ -0.37
TRIM3-215ENST00000639856 NXPH2O95156 264 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 LPAR6P43657 344 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 AKR1C2P52895 323 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 DEFA5Q01523 94 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 AKR1C1Q04828 323 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 PJVKQ0ZLH3 352 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 ZNF497Q6ZNH5 498 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 PLPPR1Q8TBJ4 325 aa12.74□□□□□ -0.37
TRIM3-215ENST00000639856 BSCL2Q96G97 398 aaPredicted RBP12.74□□□□□ -0.37
TRIM3-215ENST00000639856 CLEC18AA5D8T8 446 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 GRPP07492 148 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 ACAA1P09110 424 aaPredicted RBP12.73□□□□□ -0.37
TRIM3-215ENST00000639856 VDAC1P21796 283 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 S100GP29377 79 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 CCKARP32238 428 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 NKX2-1P43699 371 aaPredicted RBP12.73□□□□□ -0.37
TRIM3-215ENST00000639856 FABP6P51161 128 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 BLOC1S1P78537 153 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 TAGLNQ01995 201 aaKnown RBP12.73□□□□□ -0.37
TRIM3-215ENST00000639856 NMSQ5H8A3 153 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 CLEC18CQ8NCF0 446 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 OR5D13Q8NGL4 314 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 IL22RA2Q969J5 263 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 HRH4Q9H3N8 390 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 C11orf1Q9H5F2 150 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 PLA2G2EQ9NZK7 142 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 ERRFI1Q9UJM3 462 aaPredicted RBP12.73□□□□□ -0.37
TRIM3-215ENST00000639856 PURGQ9UJV8 347 aaKnown RBP12.73□□□□□ -0.37
TRIM3-215ENST00000639856 CACNA1AO00555 2505 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 BORCS7-ASMTA0A0B4J1R7 106 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 SH2D1BO14796 132 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 ATG12O94817 140 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 F2RP25116 425 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 SRSF3P84103 164 aaKnown RBP12.73□□□□□ -0.37
TRIM3-215ENST00000639856 MSMPQ1L6U9 139 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 FAM169BQ8N8A8 192 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 OR8G5Q8NG78 346 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 IL1F10Q8WWZ1 152 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 ABHD14BQ96IU4 210 aa12.73□□□□□ -0.37
TRIM3-215ENST00000639856 MLNRO43193 412 aa12.72□□□□□ -0.37
TRIM3-215ENST00000639856 ADAM20O43506 726 aa12.72□□□□□ -0.37
TRIM3-215ENST00000639856 TNFSF12O43508 249 aa12.72□□□□□ -0.37
TRIM3-215ENST00000639856 ARHGDIBP52566 201 aa12.72□□□□□ -0.37
TRIM3-215ENST00000639856 NHLH2Q02577 135 aa12.72□□□□□ -0.37
TRIM3-215ENST00000639856 BCL2L14Q9BZR8 327 aa12.72□□□□□ -0.37
TRIM3-215ENST00000639856 WFDC1Q9HC57 220 aa12.72□□□□□ -0.37
TRIM3-215ENST00000639856 PARP11Q9NR21 331 aa12.72□□□□□ -0.37
TRIM3-215ENST00000639856 MBNL3Q9NUK0 354 aaKnown RBP12.72□□□□□ -0.37
TRIM3-215ENST00000639856 OR1A1Q9P1Q5 309 aa12.72□□□□□ -0.37
TRIM3-215ENST00000639856 TRAPPC2LQ9UL33 140 aa12.72□□□□□ -0.37
TRIM3-215ENST00000639856 PLCE1Q9P212 2302 aa12.72□□□□□ -0.37
TRIM3-215ENST00000639856 NBASA2RRP1 2371 aa12.72□□□□□ -0.37
TRIM3-215ENST00000639856 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.71□□□□□ -0.37
TRIM3-215ENST00000639856 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.71□□□□□ -0.37
TRIM3-215ENST00000639856 TSPAN4O14817 238 aa12.71□□□□□ -0.37
TRIM3-215ENST00000639856 SEC11BP0C7V7 166 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms