RNA–Protein interactions for RNA: ENST00000636816.1

CACNA1A-231, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,978 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-231	ENST00000636816	FBXL19-AS1	Q494R0	122 aa		13.27	□□□□□ -0.28
CACNA1A-231	ENST00000636816	GGNBP1	Q5YKI7	109 aa		13.27	□□□□□ -0.28
CACNA1A-231	ENST00000636816	SSX8	Q7RTT4	187 aa		13.27	□□□□□ -0.28
CACNA1A-231	ENST00000636816	LYZL2	Q7Z4W2	148 aa		13.27	□□□□□ -0.28
CACNA1A-231	ENST00000636816	ZNRF1	Q8ND25	227 aa		13.27	□□□□□ -0.28
CACNA1A-231	ENST00000636816	MRGPRD	Q8TDS7	321 aa		13.27	□□□□□ -0.28
CACNA1A-231	ENST00000636816	MSI2	Q96DH6	328 aa	Known RBP	13.27	□□□□□ -0.28
CACNA1A-231	ENST00000636816	C2orf50	Q96LR7	162 aa		13.27	□□□□□ -0.28
CACNA1A-231	ENST00000636816	RNF126	Q9BV68	326 aa		13.27	□□□□□ -0.28
CACNA1A-231	ENST00000636816	ESRP2	Q9H6T0	727 aa	Known RBP	13.27	□□□□□ -0.28
CACNA1A-231	ENST00000636816	C3orf85	A0A1B0GTC6	90 aa		13.27	□□□□□ -0.29
CACNA1A-231	ENST00000636816	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.27	□□□□□ -0.29
CACNA1A-231	ENST00000636816	GPR31	O00270	319 aa		13.27	□□□□□ -0.29
CACNA1A-231	ENST00000636816	HEXA	P06865	529 aa		13.27	□□□□□ -0.29
CACNA1A-231	ENST00000636816	SLC25A4	P12235	298 aa		13.27	□□□□□ -0.29
CACNA1A-231	ENST00000636816	S100A11	P31949	105 aa		13.27	□□□□□ -0.29
CACNA1A-231	ENST00000636816	IL15RA	Q13261	267 aa		13.27	□□□□□ -0.29
CACNA1A-231	ENST00000636816	EDDM3A	Q14507	147 aa		13.27	□□□□□ -0.29
CACNA1A-231	ENST00000636816	LIAT1	Q6ZQX7	453 aa		13.27	□□□□□ -0.29
CACNA1A-231	ENST00000636816	CCDC71L	Q8N9Z2	235 aa		13.27	□□□□□ -0.29
CACNA1A-231	ENST00000636816	ZNF680	Q8NEM1	530 aa		13.27	□□□□□ -0.29
CACNA1A-231	ENST00000636816	DEFB108B	Q8NET1	73 aa		13.27	□□□□□ -0.29
CACNA1A-231	ENST00000636816	OR13A1	Q8NGR1	328 aa		13.27	□□□□□ -0.29
CACNA1A-231	ENST00000636816	ARL6	Q9H0F7	186 aa		13.27	□□□□□ -0.29
CACNA1A-231	ENST00000636816	MBD2	Q9UBB5	411 aa		13.27	□□□□□ -0.29
CACNA1A-231	ENST00000636816	RNF7	Q9UBF6	113 aa		13.27	□□□□□ -0.29
CACNA1A-231	ENST00000636816		A0A1B0GW55	424 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	C17orf100	A8MU93	164 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816		M0R233	179 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	SIAH2	O43255	324 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	HSPA12A	O43301	675 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	DUX4L2	P0CJ85	424 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	DUX4L3	P0CJ86	424 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	DUX4L4	P0CJ87	422 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	DUX4L5	P0CJ88	424 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	DUX4L6	P0CJ89	424 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	DUX4L7	P0CJ90	424 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	SELL	P14151	372 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	RPA2	P15927	270 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	TNFSF4	P23510	183 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	CEACAM6	P40199	344 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	BEX5	Q5H9J7	111 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	TMEM65	Q6PI78	240 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	DUX4L9	Q6RFH8	374 aa	Predicted RBP	13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	OR52L2P	Q8NGH6	319 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	C18orf12	Q96KH6	178 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	SUCNR1	Q9BXA5	334 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	KCNIP1	Q9NZI2	227 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	DUX4	Q9UBX2	424 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	TNFSF18	Q9UNG2	199 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	MAB21L2	Q9Y586	359 aa		13.26	□□□□□ -0.29
CACNA1A-231	ENST00000636816	NPIPB11	E5RHQ5	1161 aa		13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	IGLV2-14	P01704	120 aa		13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	HBZ	P02008	142 aa		13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	CYCS	P99999	105 aa	Known RBP	13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	TLE1	Q04724	770 aa		13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	RAB32	Q13637	225 aa		13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	IAH1	Q2TAA2	248 aa	Predicted RBP	13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	MEX3B	Q6ZN04	569 aa	Known RBP	13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	FAM90A1	Q86YD7	464 aa		13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	OR10V1	Q8NGI7	309 aa		13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	ANGPTL6	Q8NI99	470 aa		13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	THAP6	Q8TBB0	222 aa		13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	PPP1R3C	Q9UQK1	317 aa		13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	OOEP	A6NGQ2	149 aa		13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	PGLYRP1	O75594	196 aa	Predicted RBP	13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	SSTR5	P35346	364 aa		13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	RND3	P61587	244 aa		13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	GNMT	Q14749	295 aa		13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	RFESD	Q8TAC1	157 aa		13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	CA5BP1	Q8WTZ4	195 aa		13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	NDRG3	Q9UGV2	375 aa		13.25	□□□□□ -0.29
CACNA1A-231	ENST00000636816	ARFGEF3	Q5TH69	2177 aa		13.24	□□□□□ -0.29
CACNA1A-231	ENST00000636816	RNF222	A6NCQ9	220 aa		13.24	□□□□□ -0.29
CACNA1A-231	ENST00000636816	OR8U9	P0C7N5	309 aa		13.24	□□□□□ -0.29
CACNA1A-231	ENST00000636816	HTR2B	P41595	481 aa		13.24	□□□□□ -0.29
CACNA1A-231	ENST00000636816	ZNF767P	Q75MW2	155 aa		13.24	□□□□□ -0.29
CACNA1A-231	ENST00000636816	FAM185A	Q8N0U4	392 aa		13.24	□□□□□ -0.29
CACNA1A-231	ENST00000636816	LRTM2	Q8N967	370 aa		13.24	□□□□□ -0.29
CACNA1A-231	ENST00000636816	OR8U1	Q8NH10	309 aa		13.24	□□□□□ -0.29
CACNA1A-231	ENST00000636816	FAM222B	Q8WU58	562 aa		13.24	□□□□□ -0.29
CACNA1A-231	ENST00000636816	GALM	Q96C23	342 aa		13.24	□□□□□ -0.29
CACNA1A-231	ENST00000636816	SNX22	Q96L94	193 aa		13.24	□□□□□ -0.29
CACNA1A-231	ENST00000636816	TMEM222	Q9H0R3	208 aa		13.24	□□□□□ -0.29
CACNA1A-231	ENST00000636816	OR5AC2	Q9NZP5	309 aa		13.24	□□□□□ -0.29
CACNA1A-231	ENST00000636816	CD3E	P07766	207 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	LUM	P51884	338 aa	Predicted RBP	13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	EXOSC2	Q13868	293 aa	Known RBP	13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	MST1L	Q2TV78	715 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	TMEM268	Q5VZI3	342 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	FOXRED2	Q8IWF2	684 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	SLC35G3	Q8N808	338 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	LILRB1	Q8NHL6	650 aa	Predicted RBP	13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816		Q8TCH9	128 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	FAM122A	Q96E09	287 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	RRNAD1	Q96FB5	475 aa	Known RBP	13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	FBXO9	Q9UK97	447 aa	Predicted RBP	13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	UBE2J1	Q9Y385	318 aa	Predicted RBP	13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816	IGHV3-43	A0A0B4J1X8	118 aa		13.23	□□□□□ -0.29
CACNA1A-231	ENST00000636816		K7N7A8	449 aa		13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms