RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	BAG2	O95816	211 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	IGKV1D-33	P01593	117 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	IGKV1-33	P01594	117 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	IGHG2	P01859	326 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	MT-ND4	P03905	459 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	TMEM11	P17152	192 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	FST	P19883	344 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	SERPINA2	P20848	420 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	GNG10	P50151	68 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	KRTAP10-11	P60412	298 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	PPP3R1	P63098	170 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	SLC35A2	P78381	396 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	ADARB1	P78563	741 aa	Known RBP	5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	ZNF816	Q0VGE8	651 aa	Predicted RBP	5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	DOC2B	Q14184	412 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	MPV17L	Q2QL34	196 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022		Q499Y3	187 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	YIF1B	Q5BJH7	314 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	C9orf152	Q5JTZ5	239 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	LAIR2	Q6ISS4	152 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	ETV3L	Q6ZN32	361 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	ZNF497	Q6ZNH5	498 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	ZNF329	Q86UD4	541 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	MRPL41	Q8IXM3	137 aa	Known RBP	5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	GAPT	Q8N292	157 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022		Q8N6K4	173 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	LINC00482	Q8N8I6	264 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	C8orf31	Q8N9H6	132 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	TMEM104	Q8NE00	496 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	OR52M1	Q8NGK5	317 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	OR10X1	Q8NGY0	326 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	SUN5	Q8TC36	379 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	GGH	Q92820	318 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	ARL11	Q969Q4	196 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	TMEM80	Q96HE8	168 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	RCC1L	Q96I51	464 aa	Known RBP	5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	NOL4L	Q96MY1	436 aa	Predicted RBP	5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	ZNF184	Q99676	751 aa	Predicted RBP	5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	PLSCR3	Q9NRY6	295 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	FKBP14	Q9NWM8	211 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	GFOD1	Q9NXC2	390 aa		5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	RCC2	Q9P258	522 aa	Known RBP	5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	EXOSC1	Q9Y3B2	195 aa	Known RBP	5.78	□□□□□ -1.48
CACNA1A-222	ENST00000636022	IGHV1-3	A0A0C4DH29	117 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	WI2-2373I1.2	A0A1W2PRP0	233 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	CCRL2	O00421	344 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	PF4	P02776	101 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	CSTB	P04080	98 aa	Known RBP	5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	GAPDH	P04406	335 aa	Known RBP	5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	HNRNPC	P07910	306 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	GTF2F2	P13984	249 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	MYL12A	P19105	171 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	VHL	P40337	213 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	REG1B	P48304	166 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	THBS3	P49746	956 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	ZNF134	P52741	427 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	RPL23A	P62750	156 aa	Known RBP	5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	EGFEM1P	Q0D2K5	195 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	ST3GAL4	Q11206	333 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	HES1	Q14469	280 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	HNF4G	Q14541	408 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	SLC22A6	Q4U2R8	563 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	ATAD3C	Q5T2N8	411 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	TTC23	Q5W5X9	447 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	OR2W3	Q7Z3T1	314 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	IZUMO1	Q8IYV9	350 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	PACRGL	Q8N7B6	248 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	ZFP41	Q8N8Y5	198 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	UBALD1	Q8TB05	177 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	CHPT1	Q8WUD6	406 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	FBLIM1	Q8WUP2	373 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	CCDC107	Q8WV48	283 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	MUL1	Q969V5	352 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	MRPS24	Q96EL2	167 aa	Known RBP	5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	CYYR1	Q96J86	154 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	EAF1	Q96JC9	268 aa	Predicted RBP	5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	OR14A2	Q96R54	314 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	S100A13	Q99584	98 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	LINC00527	Q9UJ94	153 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	RYR2	Q92736	4967 aa		5.77	□□□□□ -1.49
CACNA1A-222	ENST00000636022	SORL1	Q92673	2214 aa		5.76	□□□□□ -1.49
CACNA1A-222	ENST00000636022	LYST	Q99698	3801 aa		5.76	□□□□□ -1.49
CACNA1A-222	ENST00000636022	IGHV3-43	A0A0B4J1X8	118 aa		5.76	□□□□□ -1.49
CACNA1A-222	ENST00000636022	IGHV3-72	A0A0B4J1Y9	119 aa		5.76	□□□□□ -1.49
CACNA1A-222	ENST00000636022		A0A1W2PPK0	400 aa		5.76	□□□□□ -1.49
CACNA1A-222	ENST00000636022	SERPINE3	A8MV23	424 aa		5.76	□□□□□ -1.49
CACNA1A-222	ENST00000636022	ZNF736	B4DX44	427 aa	Predicted RBP	5.76	□□□□□ -1.49
CACNA1A-222	ENST00000636022	C12orf77	C9JDV5	145 aa		5.76	□□□□□ -1.49
CACNA1A-222	ENST00000636022	AIP	O00170	330 aa		5.76	□□□□□ -1.49
CACNA1A-222	ENST00000636022	SDCBP	O00560	298 aa	Predicted RBP	5.76	□□□□□ -1.49
CACNA1A-222	ENST00000636022	SLC31A2	O15432	143 aa		5.76	□□□□□ -1.49
CACNA1A-222	ENST00000636022	SC5D	O75845	299 aa		5.76	□□□□□ -1.49
CACNA1A-222	ENST00000636022	DUS4L	O95620	317 aa	Known RBP	5.76	□□□□□ -1.49
CACNA1A-222	ENST00000636022	MPIG6B	O95866	241 aa		5.76	□□□□□ -1.49
CACNA1A-222	ENST00000636022	CD1A	P06126	327 aa		5.76	□□□□□ -1.49
CACNA1A-222	ENST00000636022	GNAO1	P09471	354 aa		5.76	□□□□□ -1.49
CACNA1A-222	ENST00000636022	IGHV3-43D	P0DP04	118 aa		5.76	□□□□□ -1.49
CACNA1A-222	ENST00000636022	CD1B	P29016	333 aa		5.76	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms