RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 SLC31A2O15432 143 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 CIB2O75838 187 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 APOL3O95236 402 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 OSMP13725 252 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 ACTBP60709 375 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 MS4A2Q01362 244 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 LSAMPQ13449 338 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 KLF5Q13887 457 aaPredicted RBP13.75□□□□□ -0.21
CLN6-212ENST00000636020 TRIM25Q14258 630 aaKnown RBP13.75□□□□□ -0.21
CLN6-212ENST00000636020 C5orf64Q2M2E5 130 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 LGALS9CQ6DKI2 356 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 LIN54Q6MZP7 749 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 SLC25A48Q6ZT89 311 aaKnown RBP13.75□□□□□ -0.21
CLN6-212ENST00000636020 SSX6Q7RTT6 188 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 Q8N402 240 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 TCTEX1D1Q8N7M0 179 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 OR9G4Q8NGQ1 327 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 CNIH3Q8TBE1 160 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 ASB9Q96DX5 294 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 ADGRL4Q9HBW9 690 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 FAM118AQ9NWS6 357 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 CLN6Q9NWW5 311 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 NUBP2Q9Y5Y2 271 aa13.75□□□□□ -0.21
CLN6-212ENST00000636020 SDCBPO00560 298 aaPredicted RBP13.74□□□□□ -0.21
CLN6-212ENST00000636020 ZP3P21754 424 aa13.74□□□□□ -0.21
CLN6-212ENST00000636020 KCNJ3P48549 501 aa13.74□□□□□ -0.21
CLN6-212ENST00000636020 C1orf146Q5VVC0 180 aa13.74□□□□□ -0.21
CLN6-212ENST00000636020 CYP2R1Q6VVX0 501 aa13.74□□□□□ -0.21
CLN6-212ENST00000636020 PRSS35Q8N3Z0 413 aa13.74□□□□□ -0.21
CLN6-212ENST00000636020 RGP1Q92546 391 aaPredicted RBP13.74□□□□□ -0.21
CLN6-212ENST00000636020 FGGYQ96C11 551 aa13.74□□□□□ -0.21
CLN6-212ENST00000636020 NR1H4Q96RI1 486 aaPredicted RBP13.74□□□□□ -0.21
CLN6-212ENST00000636020 CST11Q9H112 138 aa13.74□□□□□ -0.21
CLN6-212ENST00000636020 NEK6Q9HC98 313 aa13.74□□□□□ -0.21
CLN6-212ENST00000636020 TVP23BQ9NYZ1 205 aa13.74□□□□□ -0.21
CLN6-212ENST00000636020 IGHV3-43A0A0B4J1X8 118 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 NBR2O15453 112 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 TPPPO94811 219 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 MT-ND2P03891 347 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 KRT8P05787 483 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 IGHV3-43DP0DP04 118 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 MED14OSP0DP75 135 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 EGR2P11161 476 aaPredicted RBP13.73□□□□□ -0.21
CLN6-212ENST00000636020 CD81P60033 236 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 LRRC36Q1X8D7 754 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 Q3ZCU0 254 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 PYHIN1Q6K0P9 492 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 DEFB125Q8N687 156 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 ZNF439Q8NDP4 499 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 UBALD1Q8TB05 177 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 ARL11Q969Q4 196 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 MS4A10Q96PG2 267 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 MAGIXQ9H6Y5 334 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 RANGRFQ9HD47 186 aaPredicted RBP13.73□□□□□ -0.21
CLN6-212ENST00000636020 ETAA1Q9NY74 926 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 SIGLEC8Q9NYZ4 499 aa13.73□□□□□ -0.21
CLN6-212ENST00000636020 KLK5Q9Y337 293 aaPredicted RBP13.73□□□□□ -0.21
CLN6-212ENST00000636020 DBTP11182 482 aaKnown RBP13.72□□□□□ -0.21
CLN6-212ENST00000636020 ATP6V1B2P21281 511 aa13.72□□□□□ -0.21
CLN6-212ENST00000636020 ZNF134P52741 427 aa13.72□□□□□ -0.21
CLN6-212ENST00000636020 EWSR1Q01844 656 aaKnown RBP eCLIP13.72□□□□□ -0.21
CLN6-212ENST00000636020 FLOT2Q14254 428 aa13.72□□□□□ -0.21
CLN6-212ENST00000636020 GK3PQ14409 553 aa13.72□□□□□ -0.21
CLN6-212ENST00000636020 ZNF660Q6AZW8 331 aaPredicted RBP13.72□□□□□ -0.21
CLN6-212ENST00000636020 BCDIN3DQ7Z5W3 292 aaKnown RBP13.72□□□□□ -0.21
CLN6-212ENST00000636020 TMEM179BQ7Z7N9 219 aa13.72□□□□□ -0.21
CLN6-212ENST00000636020 NEURL2Q9BR09 285 aa13.72□□□□□ -0.21
CLN6-212ENST00000636020 ZNF251Q9BRH9 671 aa13.72□□□□□ -0.21
CLN6-212ENST00000636020 OVOL2Q9BRP0 275 aa13.72□□□□□ -0.21
CLN6-212ENST00000636020 TEX12Q9BXU0 123 aa13.72□□□□□ -0.21
CLN6-212ENST00000636020 TCRBV5S2A0A599 114 aa13.71□□□□□ -0.21
CLN6-212ENST00000636020 LANCL1O43813 399 aa13.71□□□□□ -0.21
CLN6-212ENST00000636020 CSN3P07498 182 aa13.71□□□□□ -0.21
CLN6-212ENST00000636020 OCM2P0CE71 109 aa13.71□□□□□ -0.21
CLN6-212ENST00000636020 OCMP0CE72 109 aaPredicted RBP13.71□□□□□ -0.21
CLN6-212ENST00000636020 UBCP0CG48 685 aaKnown RBP13.71□□□□□ -0.21
CLN6-212ENST00000636020 TMEM225BP0DP42 221 aa13.71□□□□□ -0.21
CLN6-212ENST00000636020 MECP2P51608 486 aaKnown RBP13.71□□□□□ -0.21
CLN6-212ENST00000636020 TPPP2P59282 170 aa13.71□□□□□ -0.21
CLN6-212ENST00000636020 CT45A1Q5HYN5 189 aa13.71□□□□□ -0.21
CLN6-212ENST00000636020 ELP2Q6IA86 826 aa13.71□□□□□ -0.21
CLN6-212ENST00000636020 CD200R1LQ6Q8B3 271 aa13.71□□□□□ -0.21
CLN6-212ENST00000636020 NPBQ8NG41 125 aa13.71□□□□□ -0.21
CLN6-212ENST00000636020 CT45A3Q8NHU0 189 aa13.71□□□□□ -0.21
CLN6-212ENST00000636020 SRD5A3Q9H8P0 318 aa13.71□□□□□ -0.21
CLN6-212ENST00000636020 CNOT2Q9NZN8 540 aaKnown RBP13.71□□□□□ -0.21
CLN6-212ENST00000636020 A3GALT2U3KPV4 340 aa13.71□□□□□ -0.21
CLN6-212ENST00000636020 METTL15A6NJ78 407 aa13.7□□□□□ -0.22
CLN6-212ENST00000636020 NDUFA3O95167 84 aa13.7□□□□□ -0.22
CLN6-212ENST00000636020 CD7P09564 240 aa13.7□□□□□ -0.22
CLN6-212ENST00000636020 ZNF20P17024 532 aa13.7□□□□□ -0.22
CLN6-212ENST00000636020 SYNJ2BPP57105 145 aa13.7□□□□□ -0.22
CLN6-212ENST00000636020 CX3CL1P78423 397 aa13.7□□□□□ -0.22
CLN6-212ENST00000636020 TMEM267Q0VDI3 215 aaPredicted RBP13.7□□□□□ -0.22
CLN6-212ENST00000636020 DHFR2Q86XF0 187 aa13.7□□□□□ -0.22
CLN6-212ENST00000636020 KRTAP4-5Q9BYR2 181 aa13.7□□□□□ -0.22
CLN6-212ENST00000636020 PRKYO43930 277 aa13.69□□□□□ -0.22
CLN6-212ENST00000636020 IL13RA2Q14627 380 aa13.69□□□□□ -0.22
CLN6-212ENST00000636020 ACTBL2Q562R1 376 aa13.69□□□□□ -0.22
CLN6-212ENST00000636020 TMEM244Q5VVB8 128 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms