RNA–Protein interactions for RNA: ENST00000630659.2

BBS1-225, Transcript of Bardet-Biedl syndrome 1, human

TSL 5 BASIC

Gene BBS1, Length 1,934 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-225	ENST00000630659	FBXL14	Q8N1E6	418 aa		13.17	□□□□□ -0.3
BBS1-225	ENST00000630659	GJC3	Q8NFK1	279 aa		13.17	□□□□□ -0.3
BBS1-225	ENST00000630659	BOD1	Q96IK1	185 aa		13.17	□□□□□ -0.3
BBS1-225	ENST00000630659	CISD1	Q9NZ45	108 aa	Known RBP	13.17	□□□□□ -0.3
BBS1-225	ENST00000630659	SYNGR4	O95473	234 aa		13.16	□□□□□ -0.3
BBS1-225	ENST00000630659	TTR	P02766	147 aa		13.16	□□□□□ -0.3
BBS1-225	ENST00000630659	TNFSF10	P50591	281 aa		13.16	□□□□□ -0.3
BBS1-225	ENST00000630659	MTCP1	P56278	107 aa		13.16	□□□□□ -0.3
BBS1-225	ENST00000630659	TMEM50B	P56557	158 aa		13.16	□□□□□ -0.3
BBS1-225	ENST00000630659	GRB2	P62993	217 aa	Known RBP	13.16	□□□□□ -0.3
BBS1-225	ENST00000630659	CCL20	P78556	96 aa		13.16	□□□□□ -0.3
BBS1-225	ENST00000630659	LGI3	Q8N145	548 aa		13.16	□□□□□ -0.3
BBS1-225	ENST00000630659	ABHD3	Q8WU67	409 aa		13.16	□□□□□ -0.3
BBS1-225	ENST00000630659	TMEM170A	Q8WVE7	144 aa		13.16	□□□□□ -0.3
BBS1-225	ENST00000630659	TMEM45B	Q96B21	275 aa		13.16	□□□□□ -0.3
BBS1-225	ENST00000630659	ARHGAP5-AS1	Q96IT6	56 aa		13.16	□□□□□ -0.3
BBS1-225	ENST00000630659	NAA60	Q9H7X0	242 aa		13.16	□□□□□ -0.3
BBS1-225	ENST00000630659	IGKV3D-15	A0A087WSY6	115 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	ZNF891	A8MT65	544 aa	Predicted RBP	13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	RAD51D	O75771	328 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	OR10J1	P30954	320 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	ALDH3B1	P43353	468 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	HIST1H3A	P68431	136 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	SRPX	P78539	464 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	BAX	Q07812	192 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	FAM27B	Q5VT28	67 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	ZNF774	Q6NX45	483 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	OR2C3	Q8N628	320 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	FDCSP	Q8NFU4	85 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	CPT1C	Q8TCG5	803 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	NPRL2	Q8WTW4	380 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	ZNF837	Q96EG3	531 aa	Predicted RBP	13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	ADAT3	Q96EY9	351 aa	Predicted RBP	13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	BTF3L4	Q96K17	158 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	C1orf147	Q96MC9	270 aa	Predicted RBP	13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	HIST1H2AA	Q96QV6	131 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	ST6GALNAC5	Q9BVH7	336 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	RIF1	Q5UIP0	2472 aa	Known RBP	13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	SDCBP	O00560	298 aa	Predicted RBP	13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	LMX1B	O60663	402 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	CTSS	P25774	331 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	COL10A1	Q03692	680 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	TMEM187	Q14656	261 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	MRPL41	Q8IXM3	137 aa	Known RBP	13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	C18orf12	Q96KH6	178 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	GAL3ST2	Q9H3Q3	398 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	SDF2L1	Q9HCN8	221 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	GPR173	Q9NS66	373 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	CBLN4	Q9NTU7	201 aa		13.15	□□□□□ -0.3
BBS1-225	ENST00000630659	YLPM1	P49750	1951 aa	Known RBP	13.14	□□□□□ -0.31
BBS1-225	ENST00000630659		A0A1B0GV50	99 aa		13.14	□□□□□ -0.31
BBS1-225	ENST00000630659	CDS2	O95674	445 aa		13.14	□□□□□ -0.31
BBS1-225	ENST00000630659	ZNF121	P58317	390 aa	Predicted RBP	13.14	□□□□□ -0.31
BBS1-225	ENST00000630659	ACSF3	Q4G176	576 aa	Predicted RBP	13.14	□□□□□ -0.31
BBS1-225	ENST00000630659	RIPPLY2	Q5TAB7	128 aa		13.14	□□□□□ -0.31
BBS1-225	ENST00000630659	FAM90A2P	Q658T7	463 aa		13.14	□□□□□ -0.31
BBS1-225	ENST00000630659	IGFL2	Q6UWQ7	119 aa		13.14	□□□□□ -0.31
BBS1-225	ENST00000630659	LIAT1	Q6ZQX7	453 aa		13.14	□□□□□ -0.31
BBS1-225	ENST00000630659	ZNF2	Q9BSG1	426 aa	Predicted RBP	13.14	□□□□□ -0.31
BBS1-225	ENST00000630659	DEFB127	Q9H1M4	99 aa		13.14	□□□□□ -0.31
BBS1-225	ENST00000630659	PLEKHF2	Q9H8W4	249 aa		13.14	□□□□□ -0.31
BBS1-225	ENST00000630659	MCTS1	Q9ULC4	181 aa	Known RBP	13.14	□□□□□ -0.31
BBS1-225	ENST00000630659	HSF4	Q9ULV5	492 aa		13.14	□□□□□ -0.31
BBS1-225	ENST00000630659	RCL1	Q9Y2P8	373 aa	Known RBP	13.14	□□□□□ -0.31
BBS1-225	ENST00000630659	MMP9	P14780	707 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	TMEM241	Q24JQ0	296 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	DEFB109B	Q30KR1	87 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	SPIN2A	Q99865	258 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	SPIN2B	Q9BPZ2	258 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	TMEM38B	Q9NVV0	291 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	FOXI3	A8MTJ6	420 aa	Predicted RBP	13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	NPS	P0C0P6	89 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	ABCA11P	Q4W5N1	156 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	RNFT1	Q5M7Z0	435 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	FAM185A	Q8N0U4	392 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	OR8B12	Q8NGG6	310 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	OR4D5	Q8NGN0	318 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	OR5B12	Q96R08	314 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	IMMP2L	Q96T52	175 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	AGMAT	Q9BSE5	352 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	PRRG4	Q9BZD6	226 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	GPR35	Q9HC97	309 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	FKBP11	Q9NYL4	201 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	RNF150	Q9ULK6	438 aa		13.13	□□□□□ -0.31
BBS1-225	ENST00000630659	TRGV5	A0A0B4J1U4	118 aa		13.12	□□□□□ -0.31
BBS1-225	ENST00000630659	ITGB1BP1	O14713	200 aa		13.12	□□□□□ -0.31
BBS1-225	ENST00000630659	XRCC2	O43543	280 aa		13.12	□□□□□ -0.31
BBS1-225	ENST00000630659	MRPL33	O75394	65 aa	Known RBP	13.12	□□□□□ -0.31
BBS1-225	ENST00000630659	EDN3	P14138	238 aa		13.12	□□□□□ -0.31
BBS1-225	ENST00000630659	PIGP	P57054	158 aa		13.12	□□□□□ -0.31
BBS1-225	ENST00000630659	PMS2P11	Q13670	270 aa		13.12	□□□□□ -0.31
BBS1-225	ENST00000630659	CEACAM16	Q2WEN9	425 aa		13.12	□□□□□ -0.31
BBS1-225	ENST00000630659	TEX38	Q6PEX7	206 aa		13.12	□□□□□ -0.31
BBS1-225	ENST00000630659	CMTM1	Q8IZ96	169 aa		13.12	□□□□□ -0.31
BBS1-225	ENST00000630659	OR51T1	Q8NGJ9	327 aa		13.12	□□□□□ -0.31
BBS1-225	ENST00000630659	OR51E1	Q8TCB6	317 aa		13.12	□□□□□ -0.31
BBS1-225	ENST00000630659	C20orf144	Q9BQM9	153 aa		13.12	□□□□□ -0.31
BBS1-225	ENST00000630659	TM2D1	Q9BX74	207 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms