RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 RNF141Q8WVD5 230 aa6.4□□□□□ -1.39
PKP4-217ENST00000628904 MARC2Q969Z3 335 aa6.4□□□□□ -1.39
PKP4-217ENST00000628904 ISOC2Q96AB3 205 aa6.4□□□□□ -1.39
PKP4-217ENST00000628904 CNTNAP3BQ96NU0 1288 aa6.4□□□□□ -1.39
PKP4-217ENST00000628904 SMG1Q96Q15 3661 aaKnown RBP6.39□□□□□ -1.39
PKP4-217ENST00000628904 ABCD4O14678 606 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 FCGR3BO75015 233 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 DEFA4P12838 97 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 DLX1P56177 255 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 MIDNQ504T8 468 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 BHLHA15Q7RTS1 189 aaPredicted RBP6.39□□□□□ -1.39
PKP4-217ENST00000628904 ASCL5Q7RTU5 278 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 FAM185AQ8N0U4 392 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 OR2V2Q96R30 315 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 POLDIP2Q9Y2S7 368 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 LINC01387J3KSC0 135 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 DNPH1O43598 174 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 ENSAO43768 121 aaKnown RBP6.39□□□□□ -1.39
PKP4-217ENST00000628904 IGHV3-48P01763 117 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 TBPP20226 339 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 AKR1C8PQ5T2L2 129 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 OR5A2Q8NGI9 324 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 PLPPR1Q8TBJ4 325 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 PTX4Q96A99 478 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 DCAF16Q9NXF7 216 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 RPS10-NUDT3A0A1W2PQS6 291 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 SMPD2O60906 423 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 IFNA10P01566 189 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 IFNA5P01569 189 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 FGF12P61328 243 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 COL10A1Q03692 680 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 KIAA0141Q14154 515 aaPredicted RBP6.39□□□□□ -1.39
PKP4-217ENST00000628904 GUCA2BQ16661 112 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 VAX1Q5SQQ9 334 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 LPCAT3Q6P1A2 487 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 SPAG16Q8N0X2 631 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 MDS2Q8NDY4 140 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 LHFPL5Q8TAF8 219 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 BCL2L2Q92843 193 aaPredicted RBP6.39□□□□□ -1.39
PKP4-217ENST00000628904 GALMQ96C23 342 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 CCL13Q99616 98 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 ABHD14AQ9BUJ0 271 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 RNF126Q9BV68 326 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 C1QTNF5Q9BXJ0 243 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 FGF23Q9GZV9 251 aaPredicted RBP6.39□□□□□ -1.39
PKP4-217ENST00000628904 RAB18Q9NP72 206 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 RCC2Q9P258 522 aaKnown RBP6.39□□□□□ -1.39
PKP4-217ENST00000628904 ZMAT5Q9UDW3 170 aaKnown RBP6.39□□□□□ -1.39
PKP4-217ENST00000628904 OSGIN2Q9Y236 505 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 NUP210LQ5VU65 1888 aa6.39□□□□□ -1.39
PKP4-217ENST00000628904 MYO9AB2RTY4 2548 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 USP9XQ93008 2570 aaPredicted RBP6.38□□□□□ -1.39
PKP4-217ENST00000628904 HMSDA8MTL9 139 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 LYNX1G3V0Z9 82 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 RPL36A-HNRNPH2H7BZ11 118 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 M0R1X1 148 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 TM4SF5O14894 197 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 PSPNO60542 156 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 IFNA4P05014 189 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 GLAP06280 429 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 LYNX1P0DP58 116 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 HNF1AP20823 631 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 OTX1P32242 354 aaPredicted RBP6.38□□□□□ -1.39
PKP4-217ENST00000628904 KIR2DL2P43627 348 aaPredicted RBP6.38□□□□□ -1.39
PKP4-217ENST00000628904 ACSF3Q4G176 576 aaPredicted RBP6.38□□□□□ -1.39
PKP4-217ENST00000628904 NHLRC3Q5JS37 347 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 PRSS54Q6PEW0 395 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 STX12Q86Y82 276 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 ITLN1Q8WWA0 313 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 CNTNAP3Q9BZ76 1288 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 ETV2O00321 342 aaPredicted RBP6.38□□□□□ -1.39
PKP4-217ENST00000628904 CTSDP07339 412 aaPredicted RBP6.38□□□□□ -1.39
PKP4-217ENST00000628904 FBP1P09467 338 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 LPAR6P43657 344 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 PEAR1Q5VY43 1037 aaPredicted RBP6.38□□□□□ -1.39
PKP4-217ENST00000628904 LIAT1Q6ZQX7 453 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 TGIF2LYQ8IUE0 185 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 LYG1Q8N1E2 194 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 OR5P3Q8WZ94 311 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 SNRNP40Q96DI7 357 aaKnown RBP6.38□□□□□ -1.39
PKP4-217ENST00000628904 PIK3IP1Q96FE7 263 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 PRDM14Q9GZV8 571 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 RHOFQ9HBH0 211 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 DECR2Q9NUI1 292 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 AURKAIP1Q9NWT8 199 aaPredicted RBP6.38□□□□□ -1.39
PKP4-217ENST00000628904 ZNRD1Q9P1U0 126 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 EDARQ9UNE0 448 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 TRAV24A0A0B4J272 114 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 TRDCB7Z8K6 153 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 LY6HO94772 140 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 GYPAP02724 150 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 CTRB1P17538 263 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 CCL1P22362 96 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 CTRB2Q6GPI1 263 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 TMEM65Q6PI78 240 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 RXFP4Q8TDU9 374 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 RSG1Q9BU20 258 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 ALX4Q9H161 411 aaPredicted RBP6.38□□□□□ -1.39
PKP4-217ENST00000628904 SPACA1Q9HBV2 294 aa6.38□□□□□ -1.39
PKP4-217ENST00000628904 GNG13Q9P2W3 67 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms