RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 TMEM30BQ3MIR4 351 aa12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 C9orf152Q5JTZ5 239 aa12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 PRSS48Q7RTY5 328 aa12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 CENPVQ7Z7K6 275 aaPredicted RBP12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 LYPD6Q86Y78 171 aa12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 PRR18Q8N4B5 295 aa12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 DRAM1Q8N682 238 aa12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 OR56B4Q8NH76 319 aa12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 KCNG3Q8TAE7 436 aa12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 UBALD1Q8TB05 177 aa12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 TMEM59Q9BXS4 323 aa12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 GFOD1Q9NXC2 390 aa12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 GNG12Q9UBI6 72 aa12.73□□□□□ -0.37
CHRNA4-211ENST00000628606 IGHV3-43A0A0B4J1X8 118 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 C15orf65H3BRN8 121 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 CCRL2O00421 344 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 HSD17B6O14756 317 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 ARL6IP5O75915 188 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 SNRNP70P08621 437 aaKnown RBP12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 UCHL1P09936 223 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 IGHV3-43DP0DP04 118 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 CD28P10747 220 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 TMEM11P17152 192 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 HTR2CP28335 458 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 VHLP40337 213 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 RANBP1P43487 201 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 MLLT11Q13015 90 aaPredicted RBP12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 TPBGQ13641 420 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 Q3ZCU0 254 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 NKAPLQ5M9Q1 402 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 C1orf100Q5SVJ3 147 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 Q6ZS46 218 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 MOB3BQ86TA1 216 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 LRRTM1Q86UE6 522 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 OCSTAMPQ9BR26 566 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 MOB4Q9Y3A3 225 aa12.72□□□□□ -0.37
CHRNA4-211ENST00000628606 C12orf77C9JDV5 145 aa12.71□□□□□ -0.37
CHRNA4-211ENST00000628606 GP2P55259 537 aaKnown RBP12.71□□□□□ -0.37
CHRNA4-211ENST00000628606 TMEM95Q3KNT9 176 aa12.71□□□□□ -0.37
CHRNA4-211ENST00000628606 NDUFA11Q86Y39 141 aa12.71□□□□□ -0.37
CHRNA4-211ENST00000628606 LINC00311Q8N616 119 aa12.71□□□□□ -0.37
CHRNA4-211ENST00000628606 C8orf31Q8N9H6 132 aa12.71□□□□□ -0.37
CHRNA4-211ENST00000628606 OR5AU1Q8NGC0 362 aa12.71□□□□□ -0.37
CHRNA4-211ENST00000628606 MGLLQ99685 303 aa12.71□□□□□ -0.37
CHRNA4-211ENST00000628606 WNT10AQ9GZT5 417 aa12.71□□□□□ -0.37
CHRNA4-211ENST00000628606 PLGRKTQ9HBL7 147 aa12.71□□□□□ -0.37
CHRNA4-211ENST00000628606 RAB26Q9ULW5 256 aa12.71□□□□□ -0.37
CHRNA4-211ENST00000628606 NOTCH1P46531 2555 aa12.71□□□□□ -0.38
CHRNA4-211ENST00000628606 A0A1W2PPI3 338 aa12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 FAM90A9PA6NNJ1 464 aa12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 SC5DO75845 299 aa12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 IGKV1D-33P01593 117 aa12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 IGKV1-33P01594 117 aa12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 HBZP02008 142 aa12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 VSIG8P0DPA2 414 aa12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 CPEP16870 476 aa12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 LOXL3P58215 753 aa12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 RPS27AP62979 156 aaKnown RBP12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 ZNF816Q0VGE8 651 aaPredicted RBP12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 HNF4GQ14541 408 aa12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 LYG1Q8N1E2 194 aa12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 OR4F17Q8NGA8 305 aa12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 OR6M1Q8NGM8 313 aa12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 OR4F4Q96R69 305 aa12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 URM1Q9BTM9 101 aaKnown RBP12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 TAF9BQ9HBM6 251 aa12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 OR2S2Q9NQN1 319 aa12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 LRRC42Q9Y546 428 aa12.7□□□□□ -0.38
CHRNA4-211ENST00000628606 IGHV1-3A0A0C4DH29 117 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 SLC22A1O15245 554 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 BPNT1O95861 308 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 OPN1MWP04001 364 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 OPN1MW2P0DN77 364 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 OPN1MW3P0DN78 364 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 ARSBP15848 533 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 RCC1P18754 421 aaPredicted RBP12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 MAP2K4P45985 399 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 REG1BP48304 166 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 RPS25P62851 125 aaKnown RBP12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 DIAPH2-AS1Q14236 149 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 HIST2H2BDQ6DRA6 164 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 SIGIRRQ6IA17 410 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 OR10K2Q6IF99 312 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 ZNF554Q86TJ5 538 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 GAPTQ8N292 157 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 OR10V1Q8NGI7 309 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 OR1L1Q8NH94 360 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 R3HDM4Q96D70 268 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 CITED2Q99967 270 aaPredicted RBP12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 Q9H521 79 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 ACOT13Q9NPJ3 140 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 PLEKHJ1Q9NW61 149 aa12.69□□□□□ -0.38
CHRNA4-211ENST00000628606 CMYA5Q8N3K9 4069 aa12.68□□□□□ -0.38
CHRNA4-211ENST00000628606 TXNL1O43396 289 aa12.68□□□□□ -0.38
CHRNA4-211ENST00000628606 WIPF1O43516 503 aa12.68□□□□□ -0.38
CHRNA4-211ENST00000628606 RGS11O94810 467 aa12.68□□□□□ -0.38
CHRNA4-211ENST00000628606 ATP6V1G2O95670 118 aa12.68□□□□□ -0.38
CHRNA4-211ENST00000628606 CALRP27797 417 aaKnown RBP12.68□□□□□ -0.38
CHRNA4-211ENST00000628606 BLVRBP30043 206 aaPredicted RBP12.68□□□□□ -0.38
CHRNA4-211ENST00000628606 PSMD7P51665 324 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms