RNA–Protein interactions for RNA: ENST00000628391.1

TCF4-264, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 201 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-264ENST00000628391 SRFP11831 508 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 FABP2P12104 132 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 IGLL1P15814 213 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 ZNF17P17021 662 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 CEBPBP17676 345 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 IGFBP3P17936 291 aaPredicted RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 PMCHP20382 165 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 FBLP22087 321 aaKnown RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 USF1P22415 310 aaPredicted RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 CCKBRP32239 447 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 OTX2P32243 289 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 DRD3P35462 400 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 ZNF93P35789 620 aaPredicted RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 CA7P43166 264 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 KIR2DS4P43632 304 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 OR3A4PP47883 348 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 OR1D4P47884 311 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 REG1BP48304 166 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 SOX2P48431 317 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 SGSHP51688 502 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 ZNF133P52736 654 aaPredicted RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 SUMO3P55854 103 aaPredicted RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 ATP5J2P56134 94 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 TCL1AP56279 114 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 NANOS3P60323 173 aaKnown RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 UBE2G1P62253 170 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 POU3F1Q03052 451 aaPredicted RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 ROM1Q03395 351 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 DMWDQ09019 674 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 FOXL1Q12952 345 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 KIR2DS3Q14952 304 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 RTP5Q14D33 572 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 POU2AF1Q16633 256 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 TBR1Q16650 682 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 MEP1BQ16820 701 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 LRRC75BQ2VPJ9 315 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 ALKBH6Q3KRA9 238 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 PDLIM3Q53GG5 364 aaPredicted RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 FAM78AQ5JUQ0 283 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 TMEM240Q5SV17 173 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 C1orf100Q5SVJ3 147 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 ZNF684Q5T5D7 378 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 ABHD17CQ6PCB6 329 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 BRICD5Q6PL45 260 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 LCN15Q6UWW0 184 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 ASCL4Q6XD76 172 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 RFLNAQ6ZTI6 216 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 TPRG1Q6ZUI0 275 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 C8orf86Q6ZUL3 223 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 ZNF550Q7Z398 422 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 ERASQ7Z444 233 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 PRRT2Q7Z6L0 340 aaPredicted RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 ZNF761Q86XN6 746 aaPredicted RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 MEX3DQ86XN8 651 aaKnown RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 BAGE3Q86Y29 109 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 BAGE2Q86Y30 109 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 UEVLDQ8IX04 471 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 FBXL14Q8N1E6 418 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 C2orf73Q8N5S3 287 aaPredicted RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 OR2C3Q8N628 320 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 GCSAMQ8N6F7 178 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 ZNF676Q8N7Q3 588 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 LRTM2Q8N967 370 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 LRRC75AQ8NAA5 344 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 LINC01555Q8NAE3 123 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 GATSQ8NAP1 163 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 OR10AG1Q8NH19 301 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 OR4F5Q8NH21 305 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 OR10D3Q8NH80 312 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 OR4A5Q8NH83 315 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 OR1L1Q8NH94 360 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 ATP6V0E2Q8NHE4 81 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 PPTC7Q8NI37 304 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 C8orf46Q8TAG6 207 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 PLPPR1Q8TBJ4 325 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 GRAPLQ8TC17 118 aaPredicted RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 OR51E1Q8TCB6 317 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 MRPL30Q8TCC3 161 aaKnown RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 MBD3L1Q8WWY6 194 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 NANOS1Q8WY41 292 aaKnown RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 PP6455Q8WZ26 134 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 NRGNQ92686 78 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 TMEM54Q969K7 222 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 LSM10Q969L4 123 aaKnown RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 RNF183Q96D59 192 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 WDR34Q96EX3 536 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 SCARF2Q96GP6 870 aaPredicted RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 PCED1BQ96HM7 432 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 MS4A4AQ96JQ5 239 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 LINC00615Q96LM1 132 aaPredicted RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 C4orf45Q96LM5 186 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 GPER1Q99527 375 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 MCHR1Q99705 422 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 ATP5SQ99766 215 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 SPIN2AQ99865 258 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 SPIN2BQ9BPZ2 258 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 WFDC6Q9BQY6 131 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 NDFIP1Q9BT67 221 aa1.65□□□□□ -2.15
TCF4-264ENST00000628391 FAM103A1Q9BTL3 118 aaKnown RBP1.65□□□□□ -2.15
TCF4-264ENST00000628391 GGTLC1Q9BX51 225 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms