RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 TAS2R31P59538 309 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 SNRPD2P62316 118 aaKnown RBP7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 SWI5Q1ZZU3 235 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 FAHD2BQ6P2I3 314 aaPredicted RBP7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 DHRS11Q6UWP2 260 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 SLC25A42Q86VD7 318 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 ADAD2Q8NCV1 583 aaKnown RBP7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 PPP1R35Q8TAP8 253 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 TMEM230Q96A57 120 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 FAHD2AQ96GK7 314 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 COQ2Q96H96 371 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 RTBDNQ9BSG5 229 aaPredicted RBP7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 TMPRSS13Q9BYE2 586 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 TRAV39A0A0B4J263 110 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 TK1P04183 234 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 SULT1A3P0DMM9 295 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 SULT1A4P0DMN0 295 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 PGAM2P15259 253 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 FCGR2CP31995 323 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 CD80P33681 288 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 UBE2MP61081 183 aaKnown RBP7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 SEC61A1P61619 476 aaKnown RBP7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 HLA-DRB3P79483 266 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 BAMBIQ13145 260 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 C2orf68Q2NKX9 166 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 SLC35E4Q6ICL7 350 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 C1orf87Q8N0U7 546 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 MUC20Q8N307 709 aaPredicted RBP7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 OR4A4PQ8NGN8 299 aa7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 ZNF431Q8TF32 576 aaPredicted RBP7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 MBNL3Q9NUK0 354 aaKnown RBP7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 C14orf166Q9Y224 244 aaKnown RBP7.92□□□□□ -1.14
PDLIM5-223ENST00000627587 CSPG4Q6UVK1 2322 aa7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 BET1O15155 118 aa7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 HLA-AP01891 365 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 RPS2P15880 293 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 MUC1P15941 1255 aaPredicted RBP7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 AKR1C4P17516 323 aa7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 PI3P19957 117 aa7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 ZBTB25P24278 435 aa7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 HERV-K104P61576 105 aa7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 SUPT4H1P63272 117 aaKnown RBP7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 DHRS2Q13268 280 aa7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 CLEC12BQ2HXU8 276 aa7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 TMEM128Q5BJH2 165 aa7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 LDLRAD3Q86YD5 345 aa7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 TMEM185AQ8NFB2 350 aa7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 ANGPTL6Q8NI99 470 aa7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 ZFAND1Q8TCF1 268 aa7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 TOMM40LQ969M1 308 aa7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 SNX22Q96L94 193 aa7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 ARPC5LQ9BPX5 153 aa7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 FXYD6Q9H0Q3 95 aa7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 FBXO9Q9UK97 447 aaPredicted RBP7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 PCDHB10Q9UN67 800 aa7.91□□□□□ -1.14
PDLIM5-223ENST00000627587 A0A1B0GW55 424 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 OOEPA6NGQ2 149 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 DIRAS3O95661 229 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 DUX4L2P0CJ85 424 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 DUX4L3P0CJ86 424 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 DUX4L4P0CJ87 422 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 DUX4L5P0CJ88 424 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 DUX4L6P0CJ89 424 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 DUX4L7P0CJ90 424 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 ZNF728P0DKX0 622 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 ANXA3P12429 323 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 SELLP14151 372 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 NFYAP23511 347 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 VAMP1P23763 118 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 EIF2B2P49770 351 aaKnown RBP7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 FXYD4P59646 89 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 IL13RA1P78552 427 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 DHODHQ02127 395 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 PAX5Q02548 391 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 AESQ08117 197 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 PPP1R1AQ13522 171 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 KRBOX4Q5JUW0 171 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 STUMQ69YW2 141 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 DUX4L9Q6RFH8 374 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 LYG2Q86SG7 212 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 TCTE3Q8IZS6 198 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 ZNF561Q8N587 486 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 CCL17Q92583 94 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 WDR89Q96FK6 387 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 CABLES2Q9BTV7 478 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 BARX1Q9HBU1 254 aaPredicted RBP7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 KCNIP1Q9NZI2 227 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 DUX4Q9UBX2 424 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 SLC23A1Q9UHI7 598 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 KIF25Q9UIL4 384 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 MAB21L2Q9Y586 359 aa7.9□□□□□ -1.14
PDLIM5-223ENST00000627587 MEIKINA0A087WXM9 373 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 C9orf170A2RU37 121 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 FAM172BPA6NC97 362 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 G3V3Q6 166 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 OVOL3O00110 214 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 MGST3O14880 152 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 FCN3O75636 299 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 PPYP01298 95 aa7.89□□□□□ -1.15
PDLIM5-223ENST00000627587 CTSDP07339 412 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms