RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 GABRA2P47869 451 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 HTD2P86397 168 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 COL10A1Q03692 680 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 RAB32Q13637 225 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 TMEM30BQ3MIR4 351 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 KRBOX4Q5JUW0 171 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 VHLLQ6RSH7 139 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 FAM71E2Q8N5Q1 922 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 RBPMSQ93062 196 aaKnown RBP13.75□□□□□ -0.21
LDB3-208ENST00000623007 RNF126Q9BV68 326 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 EGLN1Q9GZT9 426 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 FAM212BQ9NTI7 297 aaPredicted RBP13.75□□□□□ -0.21
LDB3-208ENST00000623007 NDRG3Q9UGV2 375 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 SH3BGRL2Q9UJC5 107 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 ERRFI1Q9UJM3 462 aaPredicted RBP13.75□□□□□ -0.21
LDB3-208ENST00000623007 NSG2Q9Y328 171 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 RBM7Q9Y580 266 aaKnown RBP13.75□□□□□ -0.21
LDB3-208ENST00000623007 ACACAQ13085 2346 aa13.75□□□□□ -0.21
LDB3-208ENST00000623007 CLEC18AA5D8T8 446 aa13.74□□□□□ -0.21
LDB3-208ENST00000623007 TMEM8BA6NDV4 472 aa13.74□□□□□ -0.21
LDB3-208ENST00000623007 ABCD4O14678 606 aa13.74□□□□□ -0.21
LDB3-208ENST00000623007 ST8SIA3O43173 380 aa13.74□□□□□ -0.21
LDB3-208ENST00000623007 ATG12O94817 140 aa13.74□□□□□ -0.21
LDB3-208ENST00000623007 TPT1P13693 172 aaKnown RBP13.74□□□□□ -0.21
LDB3-208ENST00000623007 MUC1P15941 1255 aaPredicted RBP13.74□□□□□ -0.21
LDB3-208ENST00000623007 PVALBP20472 110 aaPredicted RBP13.74□□□□□ -0.21
LDB3-208ENST00000623007 OR3A1P47881 315 aa13.74□□□□□ -0.21
LDB3-208ENST00000623007 IGFBP7Q16270 282 aa13.74□□□□□ -0.21
LDB3-208ENST00000623007 CR1LQ2VPA4 569 aa13.74□□□□□ -0.21
LDB3-208ENST00000623007 TMEM268Q5VZI3 342 aa13.74□□□□□ -0.21
LDB3-208ENST00000623007 THOC7Q6I9Y2 204 aaKnown RBP13.74□□□□□ -0.21
LDB3-208ENST00000623007 LRP11Q86VZ4 500 aa13.74□□□□□ -0.21
LDB3-208ENST00000623007 ZNF561Q8N587 486 aa13.74□□□□□ -0.21
LDB3-208ENST00000623007 CLEC18CQ8NCF0 446 aa13.74□□□□□ -0.21
LDB3-208ENST00000623007 FAM222BQ8WU58 562 aa13.74□□□□□ -0.21
LDB3-208ENST00000623007 ST8SIA2Q92186 375 aa13.74□□□□□ -0.21
LDB3-208ENST00000623007 FAM234AQ9H0X4 552 aa13.74□□□□□ -0.21
LDB3-208ENST00000623007 PLEKHF2Q9H8W4 249 aa13.74□□□□□ -0.21
LDB3-208ENST00000623007 AUP1Q9Y679 476 aa13.74□□□□□ -0.21
LDB3-208ENST00000623007 MED19A0JLT2 244 aaPredicted RBP13.73□□□□□ -0.21
LDB3-208ENST00000623007 F5H0A9 414 aaPredicted RBP13.73□□□□□ -0.21
LDB3-208ENST00000623007 WNT9BO14905 357 aa13.73□□□□□ -0.21
LDB3-208ENST00000623007 SPRY3O43610 288 aa13.73□□□□□ -0.21
LDB3-208ENST00000623007 PGLYRP1O75594 196 aaPredicted RBP13.73□□□□□ -0.21
LDB3-208ENST00000623007 PSG2P11465 335 aa13.73□□□□□ -0.21
LDB3-208ENST00000623007 S100A10P60903 97 aa13.73□□□□□ -0.21
LDB3-208ENST00000623007 GNMTQ14749 295 aa13.73□□□□□ -0.21
LDB3-208ENST00000623007 PRR30Q53SZ7 412 aaPredicted RBP13.73□□□□□ -0.21
LDB3-208ENST00000623007 GPR157Q5UAW9 335 aa13.73□□□□□ -0.21
LDB3-208ENST00000623007 C1orf87Q8N0U7 546 aa13.73□□□□□ -0.21
LDB3-208ENST00000623007 GCSAMQ8N6F7 178 aa13.73□□□□□ -0.21
LDB3-208ENST00000623007 EDARADDQ8WWZ3 215 aa13.73□□□□□ -0.21
LDB3-208ENST00000623007 TP53RKQ96S44 253 aa13.73□□□□□ -0.21
LDB3-208ENST00000623007 ZNF471Q9BX82 626 aaPredicted RBP13.73□□□□□ -0.21
LDB3-208ENST00000623007 SHARPINQ9H0F6 387 aa13.73□□□□□ -0.21
LDB3-208ENST00000623007 CCL28Q9NRJ3 127 aa13.73□□□□□ -0.21
LDB3-208ENST00000623007 OR6C3Q9NZP0 311 aa13.73□□□□□ -0.21
LDB3-208ENST00000623007 IGHV1-46P01743 117 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 SERPINE2P07093 398 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 MMP9P14780 707 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 BSPH1Q075Z2 132 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 MSMPQ1L6U9 139 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 SP6Q3SY56 376 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 MOGAT3Q86VF5 341 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 SLC35G3Q8N808 338 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 ITLN1Q8WWA0 313 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 RNASE6Q93091 150 aaKnown RBP13.72□□□□□ -0.21
LDB3-208ENST00000623007 CACNA1AO00555 2505 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 IGKV1D-13A0A0B4J2D9 117 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 RPS10-NUDT3A0A1W2PQS6 291 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 DPRXA6NFQ7 191 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 MPTX1A8MV57 137 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 K7EPK0 472 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 HSD17B6O14756 317 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 ZNF737O75373 536 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 ZNF205O95201 554 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 CFDP00746 253 aaPredicted RBP13.72□□□□□ -0.21
LDB3-208ENST00000623007 IGKV1-13P0DP09 117 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 CEACAM6P40199 344 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 CATR1Q13166 79 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 LYZL2Q7Z4W2 148 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 ZNF645Q8N7E2 425 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 PRR13Q9NZ81 148 aa13.72□□□□□ -0.21
LDB3-208ENST00000623007 C17orf100A8MU93 164 aa13.71□□□□□ -0.21
LDB3-208ENST00000623007 C12orf77C9JDV5 145 aa13.71□□□□□ -0.21
LDB3-208ENST00000623007 K7N7A8 449 aa13.71□□□□□ -0.21
LDB3-208ENST00000623007 THBDP07204 575 aa13.71□□□□□ -0.21
LDB3-208ENST00000623007 P2RY1P47900 373 aa13.71□□□□□ -0.21
LDB3-208ENST00000623007 AESQ08117 197 aa13.71□□□□□ -0.21
LDB3-208ENST00000623007 NCMAPQ5T1S8 102 aa13.71□□□□□ -0.21
LDB3-208ENST00000623007 MEX3BQ6ZN04 569 aaKnown RBP13.71□□□□□ -0.21
LDB3-208ENST00000623007 PDZD9Q8IXQ8 264 aa13.71□□□□□ -0.21
LDB3-208ENST00000623007 SELENOHQ8IZQ5 122 aaKnown RBP13.71□□□□□ -0.21
LDB3-208ENST00000623007 OR1S1Q8NH92 325 aa13.71□□□□□ -0.21
LDB3-208ENST00000623007 LSM10Q969L4 123 aaKnown RBP13.71□□□□□ -0.21
LDB3-208ENST00000623007 SDSLQ96GA7 329 aa13.71□□□□□ -0.21
LDB3-208ENST00000623007 COQ2Q96H96 371 aa13.71□□□□□ -0.21
LDB3-208ENST00000623007 MS4A5Q9H3V2 200 aa13.71□□□□□ -0.21
LDB3-208ENST00000623007 GCM1Q9NP62 436 aa13.71□□□□□ -0.21
LDB3-208ENST00000623007 ZC4H2Q9NQZ6 224 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms