RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	IGKV1-12	A0A0C4DH73	117 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	IGKV1D-12	P01611	117 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	BSX	Q3C1V8	233 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	WDR74	Q6RFH5	385 aa	Predicted RBP	12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	OR1F12	Q8NHA8	337 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	VAX2	Q9UIW0	290 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	IGLV3-12	A0A075B6K2	115 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	LOC102725191	A0A1B0GVB3	256 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	CELA2A	P08217	269 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	METTL15P1	P0C7V9	234 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	CCNO	P22674	350 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	OR3A1	P47881	315 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	FAM3B	P58499	235 aa	Predicted RBP	12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	ABLIM2	Q6H8Q1	611 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045		Q6ZPA2	131 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	ALKBH3	Q96Q83	286 aa	Predicted RBP	12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	OPN3	Q9H1Y3	402 aa	Predicted RBP	12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	TMEM242	Q9NWH2	141 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	ZNF32	P17041	273 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	HOXA6	P31267	233 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	RAB35	Q15286	201 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	TMEM241	Q24JQ0	296 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	SP5	Q6BEB4	398 aa	Predicted RBP	12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	H1FOO	Q8IZA3	346 aa	Predicted RBP	12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	TMEM256	Q8N2U0	113 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	DIRC2	Q96SL1	478 aa		12.35	□□□□□ -0.43
SYNRG-231	ENST00000622045	CHD3	Q12873	2000 aa	Known RBP	12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	OTX1	P32242	354 aa	Predicted RBP	12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	FAM27B	Q5VT28	67 aa		12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	WDR5B	Q86VZ2	330 aa		12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	SMRP1	Q8NCR6	262 aa		12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	DTD1	Q8TEA8	209 aa		12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	TMEM54	Q969K7	222 aa		12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	TBX15	Q96SF7	602 aa		12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	PPP1R14D	Q9NXH3	145 aa		12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	IRF2	P14316	349 aa		12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	CHRNA7	P36544	502 aa		12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	RAB30	Q15771	203 aa		12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	EXT1	Q16394	746 aa		12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	ZNF818P	Q6ZRF7	136 aa		12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	RPLP1	P05386	114 aa	Known RBP	12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	BMP5	P22003	454 aa		12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	TFPI2	P48307	235 aa		12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	ARSJ	Q5FYB0	599 aa	Predicted RBP	12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	SIGLEC12	Q96PQ1	595 aa		12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	CTDSP1	Q9GZU7	261 aa		12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	12.34	□□□□□ -0.43
SYNRG-231	ENST00000622045	MAP1LC3B2	A6NCE7	125 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	ZNF737	O75373	536 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	CEACAM1	P13688	526 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	SELE	P16581	610 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	FUT6	P51993	359 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	PAX9	P55771	341 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	OR51G1	Q8NGK1	321 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	OR51H1	Q8NH63	302 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	GATAD1	Q8WUU5	269 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	MAP1LC3B	Q9GZQ8	125 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	CCL28	Q9NRJ3	127 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	ZNHIT1	O43257	154 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	SPINK2	P20155	84 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	TDRG1	Q3Y452	100 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	DNASE2B	Q8WZ79	361 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	LHX4	Q969G2	390 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	NAT8	Q9UHE5	227 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	NAGK	Q9UJ70	344 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	IGKV1D-13	A0A0B4J2D9	117 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045		A0A0G2JRQ6	117 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045		B4E171	279 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	NUPR1	O60356	82 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	IGKV1-13	P0DP09	117 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	CCL3	P10147	92 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	RAB4A	P20338	218 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	TSPAN7	P41732	249 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	UCP3	P55916	312 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	ZNF611	Q8N823	705 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	FADS6	Q8N9I5	356 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	CADM4	Q8NFZ8	388 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	EXTL1	Q92935	676 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045	MS4A10	Q96PG2	267 aa		12.33	□□□□□ -0.44
SYNRG-231	ENST00000622045		A0A0J9YW62	118 aa		12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	NPBWR2	P48146	333 aa		12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	RPL23	P62829	140 aa	Known RBP	12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	ZNF92	Q03936	586 aa		12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	IL24	Q13007	206 aa		12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	TMEM211	Q6ICI0	200 aa		12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	TOMM20L	Q6UXN7	152 aa		12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	OR10G4	Q8NGN3	311 aa		12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	OR1K1	Q8NGR3	316 aa		12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	OR2V1	Q8NHB1	315 aa		12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	TMEM170A	Q8WVE7	144 aa		12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	R3HDM4	Q96D70	268 aa		12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	OR51I2	Q9H344	312 aa		12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	HPRT1	P00492	218 aa		12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	SCT	P09683	121 aa		12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	ID3	Q02535	119 aa		12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	AAED1	Q7RTV5	226 aa		12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	OR2T10	Q8NGZ9	312 aa		12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	RNF138	Q8WVD3	245 aa		12.32	□□□□□ -0.44
SYNRG-231	ENST00000622045	RBM11	P57052	281 aa	Known RBP	12.31	□□□□□ -0.44
SYNRG-231	ENST00000622045	BAX	Q07812	192 aa		12.31	□□□□□ -0.44

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