RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 TOX3O15405 576 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-211ENST00000622020 CFIP05156 583 aa13.47□□□□□ -0.25
NPHP4-211ENST00000622020 GDF1P27539 372 aa13.47□□□□□ -0.25
NPHP4-211ENST00000622020 EPHA8P29322 1005 aaPredicted RBP13.47□□□□□ -0.25
NPHP4-211ENST00000622020 TESK1Q15569 626 aa13.47□□□□□ -0.25
NPHP4-211ENST00000622020 SPANXN5Q5MJ07 72 aa13.47□□□□□ -0.25
NPHP4-211ENST00000622020 HIST3H2BBQ8N257 126 aa13.47□□□□□ -0.25
NPHP4-211ENST00000622020 SCGB1C1Q8TD33 95 aa13.47□□□□□ -0.25
NPHP4-211ENST00000622020 RNF115Q9Y4L5 304 aa13.47□□□□□ -0.25
NPHP4-211ENST00000622020 NCKAP5O14513 1909 aa13.47□□□□□ -0.25
NPHP4-211ENST00000622020 LOC400499M0QZD8 3231 aa13.47□□□□□ -0.25
NPHP4-211ENST00000622020 OR8B8Q15620 311 aa13.47□□□□□ -0.25
NPHP4-211ENST00000622020 ZNF124Q15973 351 aa13.47□□□□□ -0.25
NPHP4-211ENST00000622020 OR8G2PQ6IF36 304 aa13.47□□□□□ -0.25
NPHP4-211ENST00000622020 MRPL21Q7Z2W9 205 aaKnown RBP13.47□□□□□ -0.25
NPHP4-211ENST00000622020 GFOD1Q9NXC2 390 aa13.47□□□□□ -0.25
NPHP4-211ENST00000622020 DOCK10Q96BY6 2186 aa13.46□□□□□ -0.25
NPHP4-211ENST00000622020 ZNF503-AS2A6NEH8 195 aa13.46□□□□□ -0.25
NPHP4-211ENST00000622020 SEC14L6B5MCN3 397 aa13.46□□□□□ -0.25
NPHP4-211ENST00000622020 TRAPPC2LH3BP13 241 aa13.46□□□□□ -0.25
NPHP4-211ENST00000622020 UCP1P25874 307 aa13.46□□□□□ -0.25
NPHP4-211ENST00000622020 MAS1LP35410 378 aa13.46□□□□□ -0.25
NPHP4-211ENST00000622020 B3GALT5-AS1P59052 145 aa13.46□□□□□ -0.25
NPHP4-211ENST00000622020 ARF1P84077 181 aaKnown RBP13.46□□□□□ -0.25
NPHP4-211ENST00000622020 ADIRFQ15847 76 aa13.46□□□□□ -0.25
NPHP4-211ENST00000622020 ZNF726P1Q15940 193 aa13.46□□□□□ -0.25
NPHP4-211ENST00000622020 SPATA46Q5T0L3 261 aa13.46□□□□□ -0.25
NPHP4-211ENST00000622020 FAM90A2PQ658T7 463 aa13.46□□□□□ -0.25
NPHP4-211ENST00000622020 CABLES2Q9BTV7 478 aa13.46□□□□□ -0.25
NPHP4-211ENST00000622020 PHF7Q9BWX1 381 aaPredicted RBP13.46□□□□□ -0.25
NPHP4-211ENST00000622020 KCNS2Q9ULS6 477 aa13.46□□□□□ -0.25
NPHP4-211ENST00000622020 WDR1O75083 606 aa13.46□□□□□ -0.26
NPHP4-211ENST00000622020 DEFA4P12838 97 aa13.46□□□□□ -0.26
NPHP4-211ENST00000622020 ZNF295-AS1Q8N0V1 137 aa13.46□□□□□ -0.26
NPHP4-211ENST00000622020 DEPPQ9NTK1 212 aa13.46□□□□□ -0.26
NPHP4-211ENST00000622020 LOC102723971A0A1B0GUV8 181 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 PINLYPA6NC86 204 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 BTBD17A6NE02 478 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 OR5H1A6NKK0 313 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 BMP5P22003 454 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 F2RP25116 425 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 CLN3Q13286 438 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 FAM185AQ8N0U4 392 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 AGBL5Q8NDL9 886 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 IFI44Q8TCB0 444 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 RPUSD4Q96CM3 377 aaKnown RBP13.45□□□□□ -0.26
NPHP4-211ENST00000622020 PLSCR2Q9NRY7 297 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 GAB2Q9UQC2 676 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 SPINK14Q6IE38 97 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 C1orf87Q8N0U7 546 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 OR10J5Q8NHC4 309 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 PSMF1Q92530 271 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 RBMXL1Q96E39 390 aaKnown RBP13.45□□□□□ -0.26
NPHP4-211ENST00000622020 IL36GQ9NZH8 169 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 ZDBF2Q9HCK1 2354 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 GTF3C1Q12789 2109 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 GJE1A6NN92 205 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 C9J4A7 227 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 PHOX2AO14813 284 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 MRPL33O75394 65 aaKnown RBP13.45□□□□□ -0.26
NPHP4-211ENST00000622020 NAPSAO96009 420 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 ERVS71-1P61550 626 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 MKXQ8IYA7 352 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 PACRGQ96M98 296 aaPredicted RBP13.45□□□□□ -0.26
NPHP4-211ENST00000622020 RBKSQ9H477 322 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 SMDT1Q9H4I9 107 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 OPA3Q9H6K4 179 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 PLA2G3Q9NZ20 509 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 PSENENQ9NZ42 101 aa13.45□□□□□ -0.26
NPHP4-211ENST00000622020 RHBDL1O75783 438 aa13.44□□□□□ -0.26
NPHP4-211ENST00000622020 RTP5Q14D33 572 aa13.44□□□□□ -0.26
NPHP4-211ENST00000622020 SLC35E3Q7Z769 313 aa13.44□□□□□ -0.26
NPHP4-211ENST00000622020 ZDHHC23Q8IYP9 409 aa13.44□□□□□ -0.26
NPHP4-211ENST00000622020 OR2V1Q8NHB1 315 aa13.44□□□□□ -0.26
NPHP4-211ENST00000622020 SF3B5Q9BWJ5 86 aaKnown RBP13.44□□□□□ -0.26
NPHP4-211ENST00000622020 MRPS17Q9Y2R5 130 aaKnown RBP13.44□□□□□ -0.26
NPHP4-211ENST00000622020 A0A087WWC5 75 aa13.44□□□□□ -0.26
NPHP4-211ENST00000622020 PATE3B3GLJ2 98 aa13.44□□□□□ -0.26
NPHP4-211ENST00000622020 TUSC2O75896 110 aa13.44□□□□□ -0.26
NPHP4-211ENST00000622020 HBE1P02100 147 aa13.44□□□□□ -0.26
NPHP4-211ENST00000622020 CELA3AP09093 270 aa13.44□□□□□ -0.26
NPHP4-211ENST00000622020 MMP7P09237 267 aaPredicted RBP13.44□□□□□ -0.26
NPHP4-211ENST00000622020 BCL2P10415 239 aa13.44□□□□□ -0.26
NPHP4-211ENST00000622020 MLF1P58340 268 aa13.44□□□□□ -0.26
NPHP4-211ENST00000622020 FGF12P61328 243 aa13.44□□□□□ -0.26
NPHP4-211ENST00000622020 PCBD1P61457 104 aa13.44□□□□□ -0.26
NPHP4-211ENST00000622020 HOXA4Q00056 320 aaPredicted RBP13.44□□□□□ -0.26
NPHP4-211ENST00000622020 IL24Q13007 206 aa13.44□□□□□ -0.26
NPHP4-211ENST00000622020 FAM53AQ6NSI3 398 aaPredicted RBP13.44□□□□□ -0.26
NPHP4-211ENST00000622020 PCSK4Q6UW60 755 aa13.44□□□□□ -0.26
NPHP4-211ENST00000622020 ATP23Q9Y6H3 246 aa13.44□□□□□ -0.26
NPHP4-211ENST00000622020 UBE2L5PA0A1B0GUS4 154 aa13.43□□□□□ -0.26
NPHP4-211ENST00000622020 CLDN34H7C241 214 aa13.43□□□□□ -0.26
NPHP4-211ENST00000622020 SELEP16581 610 aa13.43□□□□□ -0.26
NPHP4-211ENST00000622020 CXCL12P48061 93 aa13.43□□□□□ -0.26
NPHP4-211ENST00000622020 BAXQ07812 192 aa13.43□□□□□ -0.26
NPHP4-211ENST00000622020 SAP25Q8TEE9 199 aa13.43□□□□□ -0.26
NPHP4-211ENST00000622020 CLDN23Q96B33 292 aa13.43□□□□□ -0.26
NPHP4-211ENST00000622020 RCC1LQ96I51 464 aaKnown RBP13.43□□□□□ -0.26
NPHP4-211ENST00000622020 AURKAIP1Q9NWT8 199 aaPredicted RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms