RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 CAV2P51636 162 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 TMEM33P57088 247 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 LCN2P80188 198 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 HNF4GQ14541 408 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 FCN2Q15485 313 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 NDUFB6O95139 128 aa10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 CLDN1O95832 211 aa10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 RAB14P61106 215 aa10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 ZMYND11Q15326 602 aa10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 RHOFQ9HBH0 211 aa10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 CCL28Q9NRJ3 127 aa10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 ZNF581Q9P0T4 197 aa10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 PIGBOS1A0A0B4J2F0 54 aa10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 P2RX3P56373 397 aa10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 RPS16P62249 146 aaKnown RBP10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 CDSNQ15517 529 aa10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 TMEM268Q5VZI3 342 aa10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 OR4A4PQ8NGN8 299 aa10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 ZNF431Q8TF32 576 aaPredicted RBP10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 RANBP3Q9H6Z4 567 aaPredicted RBP10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 C19orf84I3L1E1 186 aa10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 TPPPO94811 219 aa10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 EFNA4P52798 201 aa10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 MRPS11P82912 194 aaKnown RBP10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 KLF9Q13886 244 aaPredicted RBP10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 CD276Q5ZPR3 534 aa10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 C20orf204Q6ZNR8 217 aa10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 CPAMD8Q8IZJ3 1885 aa10.51□□□□□ -0.73
SCAMP1-207ENST00000621999 ARHGAP21Q5T5U3 1957 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 A0A0A6YYD4 124 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 HMX3A6NHT5 357 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 SMAD7O15105 426 aaKnown RBP10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 SOD3P08294 240 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 PRRX1P54821 245 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 IAH1Q2TAA2 248 aaPredicted RBP10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 C9orf152Q5JTZ5 239 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 PRAMEF5Q5TYX0 476 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 NPDC1Q9NQX5 325 aaPredicted RBP10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 CALYQ9NYX4 217 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 DMXL2Q8TDJ6 3036 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 LOC105371242A0A075B767 164 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 CEBPZOSA8MTT3 80 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 KRASP01116 189 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 REG1BP48304 166 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 PRB3Q04118 309 aaPredicted RBP10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 MSMO1Q15800 293 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 FBXL19-AS1Q494R0 122 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 SLC38A6Q8IZM9 456 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 PLPPR1Q8TBJ4 325 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 HSPB11Q9Y547 144 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 SHANK1Q9Y566 2161 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 IGLV3-9A0A075B6K5 115 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 TRAV24A0A0B4J272 114 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 NDUFS7O75251 213 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 CYCSP99999 105 aaKnown RBP10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 TMEM128Q5BJH2 165 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 ELP2Q6IA86 826 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 ABHD14BQ96IU4 210 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 USP9YO00507 2555 aaPredicted RBP10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 TMEM178BH3BS89 294 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 FCGR3BO75015 233 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 INHBBP09529 407 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 PET100P0DJ07 73 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 FPR2P25090 351 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 FAM166AQ6J272 317 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 HEXA-AS1Q9H8Q6 139 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 METRNQ9UJH8 293 aa10.5□□□□□ -0.73
SCAMP1-207ENST00000621999 SHOXO15266 292 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 WDR86Q86TI4 376 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 RTN4RL2Q86UN3 420 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 OR4A16Q8NH70 328 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 ZDHHC16Q969W1 377 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 MARVELD3Q96A59 401 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 TMEM246Q9BRR3 403 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 Q9N2K0 584 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 OR2W1Q9Y3N9 320 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 YLPM1P49750 1951 aaKnown RBP10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 A0A0A6YYJ9 748 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 PSPNO60542 156 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 ADH4P08319 380 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 NKX2-5P52952 324 aaPredicted RBP10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 RRAS2P62070 204 aaPredicted RBP10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 H2BFWTQ7Z2G1 175 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 GAPTQ8N292 157 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 ZNF525Q8N782 197 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 OR13A1Q8NGR1 328 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 GPHA2Q96T91 129 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 SLC6A1P30531 599 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 SRPXP78539 464 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 RTL8BQ17RB0 113 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 SPAG16Q8N0X2 631 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.49□□□□□ -0.736e-7■■■■□ 25.9
SCAMP1-207ENST00000621999 LIN7CQ9NUP9 197 aaKnown RBP10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 PRR13Q9NZ81 148 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 JKAMPQ9P055 326 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 OR1A1Q9P1Q5 309 aa10.49□□□□□ -0.73
SCAMP1-207ENST00000621999 CEACAM18A8MTB9 384 aa10.48□□□□□ -0.73
SCAMP1-207ENST00000621999 IGLV3-1P01715 115 aa10.48□□□□□ -0.73
SCAMP1-207ENST00000621999 RAB7AP51149 207 aa10.48□□□□□ -0.73
SCAMP1-207ENST00000621999 PPP1R1AQ13522 171 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms