RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 METTL8Q9H825 291 aaKnown RBP17.93■□□□□ 0.46
SPAST-204ENST00000621856 DCAF16Q9NXF7 216 aa17.93■□□□□ 0.46
SPAST-204ENST00000621856 KIAA2026Q5HYC2 2103 aa17.93■□□□□ 0.46
SPAST-204ENST00000621856 ADAP1O75689 374 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 OR5AC1P0C628 307 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 LOXP28300 417 aaPredicted RBP17.92■□□□□ 0.46
SPAST-204ENST00000621856 PAX5Q02548 391 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 C1orf87Q8N0U7 546 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 ZNF561Q8N587 486 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 GALMQ96C23 342 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 CCL28Q9NRJ3 127 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 COMMD9Q9P000 198 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 K7N7A8 449 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 GYPAP02724 150 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 MUC1P15941 1255 aaPredicted RBP17.92■□□□□ 0.46
SPAST-204ENST00000621856 AGAP20933 346 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 CEACAM6P40199 344 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 SP6Q3SY56 376 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 TRAT1Q6PIZ9 186 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 ZNF818PQ6ZRF7 136 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 MUC15Q8N387 334 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 OR10V1Q8NGI7 309 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 OR13A1Q8NGR1 328 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 GALNT14Q96FL9 552 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 LURAP1Q96LR2 239 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 SUCNR1Q9BXA5 334 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 MAB21L2Q9Y586 359 aa17.92■□□□□ 0.46
SPAST-204ENST00000621856 HIVEP3Q5T1R4 2406 aa17.91■□□□□ 0.46
SPAST-204ENST00000621856 CD8AP01732 235 aa17.91■□□□□ 0.46
SPAST-204ENST00000621856 HBZP02008 142 aa17.91■□□□□ 0.46
SPAST-204ENST00000621856 HOXB5P09067 269 aa17.91■□□□□ 0.46
SPAST-204ENST00000621856 LUMP51884 338 aaPredicted RBP17.91■□□□□ 0.46
SPAST-204ENST00000621856 TEX36Q5VZQ5 186 aa17.91■□□□□ 0.46
SPAST-204ENST00000621856 OR5D13Q8NGL4 314 aa17.91■□□□□ 0.46
SPAST-204ENST00000621856 SDSLQ96GA7 329 aa17.91■□□□□ 0.46
SPAST-204ENST00000621856 TMEM204Q9BSN7 226 aa17.91■□□□□ 0.46
SPAST-204ENST00000621856 ZNF665Q9H7R5 613 aa17.91■□□□□ 0.46
SPAST-204ENST00000621856 RDH8Q9NYR8 311 aa17.91■□□□□ 0.46
SPAST-204ENST00000621856 RBM7Q9Y580 266 aaKnown RBP17.91■□□□□ 0.46
SPAST-204ENST00000621856 ANKHD1Q8IWZ3 2542 aaKnown RBP17.91■□□□□ 0.46
SPAST-204ENST00000621856 FXYD6-FXYD2A0A087WZ82 144 aa17.9■□□□□ 0.46
SPAST-204ENST00000621856 ODAMA1E959 279 aa17.9■□□□□ 0.46
SPAST-204ENST00000621856 MPPED1O15442 326 aa17.9■□□□□ 0.46
SPAST-204ENST00000621856 PHF1O43189 567 aaPredicted RBP17.9■□□□□ 0.46
SPAST-204ENST00000621856 EDDM3BP56851 147 aa17.9■□□□□ 0.46
SPAST-204ENST00000621856 RND3P61587 244 aa17.9■□□□□ 0.46
SPAST-204ENST00000621856 IFITM2Q01629 132 aa17.9■□□□□ 0.46
SPAST-204ENST00000621856 FGL1Q08830 312 aa17.9■□□□□ 0.46
SPAST-204ENST00000621856 TMEM187Q14656 261 aa17.9■□□□□ 0.46
SPAST-204ENST00000621856 TBC1D26Q86UD7 250 aa17.9■□□□□ 0.46
SPAST-204ENST00000621856 CMTM1Q8IZ96 169 aa17.9■□□□□ 0.46
SPAST-204ENST00000621856 CCL17Q92583 94 aa17.9■□□□□ 0.46
SPAST-204ENST00000621856 ARL11Q969Q4 196 aa17.9■□□□□ 0.46
SPAST-204ENST00000621856 GAFA1Q96PS6 74 aa17.9■□□□□ 0.46
SPAST-204ENST00000621856 DSCAMO60469 2012 aa17.9■□□□□ 0.46
SPAST-204ENST00000621856 LGALS8O00214 317 aa17.89■□□□□ 0.46
SPAST-204ENST00000621856 SELLP14151 372 aa17.89■□□□□ 0.46
SPAST-204ENST00000621856 S100GP29377 79 aa17.89■□□□□ 0.46
SPAST-204ENST00000621856 SWI5Q1ZZU3 235 aa17.89■□□□□ 0.46
SPAST-204ENST00000621856 CCL13Q99616 98 aa17.89■□□□□ 0.46
SPAST-204ENST00000621856 DCTN5Q9BTE1 182 aa17.89■□□□□ 0.46
SPAST-204ENST00000621856 TRAV38-1A0A0B4J264 116 aa17.89■□□□□ 0.45
SPAST-204ENST00000621856 C3orf85A0A1B0GTC6 90 aa17.89■□□□□ 0.45
SPAST-204ENST00000621856 MEX3AA1L020 520 aaKnown RBP17.89■□□□□ 0.45
SPAST-204ENST00000621856 NKX6-3A6NJ46 265 aa17.89■□□□□ 0.45
SPAST-204ENST00000621856 TMEM178BH3BS89 294 aa17.89■□□□□ 0.45
SPAST-204ENST00000621856 HEXAP06865 529 aa17.89■□□□□ 0.45
SPAST-204ENST00000621856 SSTR5P35346 364 aa17.89■□□□□ 0.45
SPAST-204ENST00000621856 P2RX3P56373 397 aa17.89■□□□□ 0.45
SPAST-204ENST00000621856 LGALSLQ3ZCW2 172 aaPredicted RBP17.89■□□□□ 0.45
SPAST-204ENST00000621856 LRRC37A5PQ49AS3 106 aa17.89■□□□□ 0.45
SPAST-204ENST00000621856 OR52L2PQ8NGH6 319 aa17.89■□□□□ 0.45
SPAST-204ENST00000621856 NINJ1Q92982 152 aa17.89■□□□□ 0.45
SPAST-204ENST00000621856 VRK1Q99986 396 aaPredicted RBP17.89■□□□□ 0.45
SPAST-204ENST00000621856 TMEM106BQ9NUM4 274 aa17.89■□□□□ 0.45
SPAST-204ENST00000621856 PKDREJQ9NTG1 2253 aa17.88■□□□□ 0.45
SPAST-204ENST00000621856 TRAV14DV4A0A0A6YYC5 116 aa17.88■□□□□ 0.45
SPAST-204ENST00000621856 SPINT2O43291 252 aa17.88■□□□□ 0.45
SPAST-204ENST00000621856 TSC22D2O75157 780 aa17.88■□□□□ 0.45
SPAST-204ENST00000621856 IFNA21P01568 189 aa17.88■□□□□ 0.45
SPAST-204ENST00000621856 CYCSP99999 105 aaKnown RBP17.88■□□□□ 0.45
SPAST-204ENST00000621856 ZNF788Q6ZQV5 615 aa17.88■□□□□ 0.45
SPAST-204ENST00000621856 LIAT1Q6ZQX7 453 aa17.88■□□□□ 0.45
SPAST-204ENST00000621856 LDLRAD3Q86YD5 345 aa17.88■□□□□ 0.45
SPAST-204ENST00000621856 PPP1R1CQ8WVI7 109 aa17.88■□□□□ 0.45
SPAST-204ENST00000621856 SLA2Q9H6Q3 261 aa17.88■□□□□ 0.45
SPAST-204ENST00000621856 FBXO9Q9UK97 447 aaPredicted RBP17.88■□□□□ 0.45
SPAST-204ENST00000621856 KCNS2Q9ULS6 477 aa17.88■□□□□ 0.45
SPAST-204ENST00000621856 ARFGEF3Q5TH69 2177 aa17.88■□□□□ 0.45
SPAST-204ENST00000621856 ADGRG4Q8IZF6 3080 aa17.88■□□□□ 0.45
SPAST-204ENST00000621856 TANC2Q9HCD6 1990 aa17.87■□□□□ 0.45
SPAST-204ENST00000621856 PPIAL4EA0A075B759 164 aa17.87■□□□□ 0.45
SPAST-204ENST00000621856 A0A1B0GW55 424 aa17.87■□□□□ 0.45
SPAST-204ENST00000621856 PPIAL4DF5H284 164 aa17.87■□□□□ 0.45
SPAST-204ENST00000621856 DUX4L2P0CJ85 424 aa17.87■□□□□ 0.45
SPAST-204ENST00000621856 DUX4L3P0CJ86 424 aa17.87■□□□□ 0.45
SPAST-204ENST00000621856 DUX4L4P0CJ87 422 aa17.87■□□□□ 0.45
SPAST-204ENST00000621856 DUX4L5P0CJ88 424 aa17.87■□□□□ 0.45
SPAST-204ENST00000621856 DUX4L6P0CJ89 424 aa17.87■□□□□ 0.45
SPAST-204ENST00000621856 DUX4L7P0CJ90 424 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms