RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 TBC1D26Q86UD7 250 aa8.83□□□□□ -1
VPS11-208ENST00000621676 MAPK1IP1LQ8NDC0 245 aa8.83□□□□□ -1
VPS11-208ENST00000621676 PXT1Q8NFP0 134 aa8.83□□□□□ -1
VPS11-208ENST00000621676 LHFPL5Q8TAF8 219 aa8.83□□□□□ -1
VPS11-208ENST00000621676 GCM1Q9NP62 436 aa8.83□□□□□ -1
VPS11-208ENST00000621676 LRP5LA4QPB2 252 aa8.83□□□□□ -1
VPS11-208ENST00000621676 IQCF6A8MYZ5 107 aa8.83□□□□□ -1
VPS11-208ENST00000621676 WRBO00258 174 aa8.83□□□□□ -1
VPS11-208ENST00000621676 COX5BP10606 129 aa8.83□□□□□ -1
VPS11-208ENST00000621676 HOXD11P31277 338 aaPredicted RBP8.83□□□□□ -1
VPS11-208ENST00000621676 GLRXP35754 106 aa8.83□□□□□ -1
VPS11-208ENST00000621676 LUMP51884 338 aaPredicted RBP8.83□□□□□ -1
VPS11-208ENST00000621676 Q3ZCU0 254 aa8.83□□□□□ -1
VPS11-208ENST00000621676 AKIRIN2Q53H80 203 aa8.83□□□□□ -1
VPS11-208ENST00000621676 RPL39P5Q59GN2 51 aa8.83□□□□□ -1
VPS11-208ENST00000621676 TMEM128Q5BJH2 165 aa8.83□□□□□ -1
VPS11-208ENST00000621676 ZNF695Q8IW36 515 aa8.83□□□□□ -1
VPS11-208ENST00000621676 FAM185AQ8N0U4 392 aa8.83□□□□□ -1
VPS11-208ENST00000621676 CMTM3Q96MX0 182 aa8.83□□□□□ -1
VPS11-208ENST00000621676 GHRLQ9UBU3 117 aa8.83□□□□□ -1
VPS11-208ENST00000621676 DYSFO75923 2080 aa8.83□□□□□ -1
VPS11-208ENST00000621676 TEP1Q99973 2627 aaKnown RBP8.83□□□□□ -1
VPS11-208ENST00000621676 NF1P21359 2839 aa8.83□□□□□ -1
VPS11-208ENST00000621676 IGKV1D-17A0A075B6S4 117 aa8.83□□□□□ -1
VPS11-208ENST00000621676 C12orf77C9JDV5 145 aa8.83□□□□□ -1
VPS11-208ENST00000621676 SIAH2O43255 324 aa8.83□□□□□ -1
VPS11-208ENST00000621676 HBZP02008 142 aa8.83□□□□□ -1
VPS11-208ENST00000621676 COL8A2P25067 703 aa8.83□□□□□ -1
VPS11-208ENST00000621676 ELP2Q6IA86 826 aa8.83□□□□□ -1
VPS11-208ENST00000621676 GSG1LQ6UXU4 331 aa8.83□□□□□ -1
VPS11-208ENST00000621676 ACP7Q6ZNF0 438 aa8.83□□□□□ -1
VPS11-208ENST00000621676 MRPL30Q8TCC3 161 aaKnown RBP8.83□□□□□ -1
VPS11-208ENST00000621676 C7orf50Q9BRJ6 194 aaKnown RBP8.83□□□□□ -1
VPS11-208ENST00000621676 TM2D1Q9BX74 207 aa8.83□□□□□ -1
VPS11-208ENST00000621676 WIPI2Q9Y4P8 454 aa8.83□□□□□ -1
VPS11-208ENST00000621676 CLDN14O95500 239 aa8.82□□□□□ -1
VPS11-208ENST00000621676 MPC2O95563 127 aa8.82□□□□□ -1
VPS11-208ENST00000621676 C1QBP02746 253 aa8.82□□□□□ -1
VPS11-208ENST00000621676 CD74P04233 296 aa8.82□□□□□ -1
VPS11-208ENST00000621676 PRB4P10163 310 aaPredicted RBP8.82□□□□□ -1
VPS11-208ENST00000621676 ZBTB25P24278 435 aa8.82□□□□□ -1
VPS11-208ENST00000621676 POLR2GP62487 172 aaKnown RBP eCLIP8.82□□□□□ -1
VPS11-208ENST00000621676 KRTAP27-1Q3LI81 207 aa8.82□□□□□ -1
VPS11-208ENST00000621676 NRN1LQ496H8 165 aa8.82□□□□□ -1
VPS11-208ENST00000621676 CXorf66Q5JRM2 361 aaPredicted RBP8.82□□□□□ -1
VPS11-208ENST00000621676 NRIP2Q9BQI9 281 aa8.82□□□□□ -1
VPS11-208ENST00000621676 KCNIP1Q9NZI2 227 aa8.82□□□□□ -1
VPS11-208ENST00000621676 KCNIP3Q9Y2W7 256 aa8.82□□□□□ -1
VPS11-208ENST00000621676 TEX15Q9BXT5 2789 aa8.82□□□□□ -1
VPS11-208ENST00000621676 RAMP3O60896 148 aa8.82□□□□□ -1
VPS11-208ENST00000621676 CD3EP07766 207 aa8.82□□□□□ -1
VPS11-208ENST00000621676 PGA5P0DJD9 388 aa8.82□□□□□ -1
VPS11-208ENST00000621676 GGNBP1Q5YKI7 109 aa8.82□□□□□ -1
VPS11-208ENST00000621676 MUC15Q8N387 334 aa8.82□□□□□ -1
VPS11-208ENST00000621676 THAP6Q8TBB0 222 aa8.82□□□□□ -1
VPS11-208ENST00000621676 BSCL2Q96G97 398 aaPredicted RBP8.82□□□□□ -1
VPS11-208ENST00000621676 COQ2Q96H96 371 aa8.82□□□□□ -1
VPS11-208ENST00000621676 NARS2Q96I59 477 aaKnown RBP8.82□□□□□ -1
VPS11-208ENST00000621676 HYLS1Q96M11 299 aa8.82□□□□□ -1
VPS11-208ENST00000621676 Q9N2K0 584 aa8.82□□□□□ -1
VPS11-208ENST00000621676 PCDHB16Q9NRJ7 776 aa8.82□□□□□ -1
VPS11-208ENST00000621676 IGHV3OR16-10A0A075B7F0 116 aa8.82□□□□□ -1
VPS11-208ENST00000621676 SERPINE2P07093 398 aa8.82□□□□□ -1
VPS11-208ENST00000621676 ERP29P30040 261 aaKnown RBP8.82□□□□□ -1
VPS11-208ENST00000621676 UCNP55089 124 aa8.82□□□□□ -1
VPS11-208ENST00000621676 SLC25A42Q86VD7 318 aa8.82□□□□□ -1
VPS11-208ENST00000621676 C9orf62Q8N4C0 152 aa8.82□□□□□ -1
VPS11-208ENST00000621676 SLC35G3Q8N808 338 aa8.82□□□□□ -1
VPS11-208ENST00000621676 SPERTQ8NA61 448 aa8.82□□□□□ -1
VPS11-208ENST00000621676 PTX4Q96A99 478 aa8.82□□□□□ -1
VPS11-208ENST00000621676 AMDHD2Q9Y303 409 aa8.82□□□□□ -1
VPS11-208ENST00000621676 A0A1W2PPR1 153 aa8.81□□□□□ -1
VPS11-208ENST00000621676 PPIHO43447 177 aaKnown RBP8.81□□□□□ -1
VPS11-208ENST00000621676 IFNA2P01563 188 aa8.81□□□□□ -1
VPS11-208ENST00000621676 COX7A1P24310 79 aa8.81□□□□□ -1
VPS11-208ENST00000621676 OPCMLQ14982 345 aa8.81□□□□□ -1
VPS11-208ENST00000621676 SMIM21Q3B7S5 101 aa8.81□□□□□ -1
VPS11-208ENST00000621676 C10orf35Q96D05 121 aa8.81□□□□□ -1
VPS11-208ENST00000621676 GFOD1Q9NXC2 390 aa8.81□□□□□ -1
VPS11-208ENST00000621676 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.81□□□□□ -1
VPS11-208ENST00000621676 IGLV1-44P01699 117 aa8.81□□□□□ -1
VPS11-208ENST00000621676 IGHV3-48P01763 117 aa8.81□□□□□ -1
VPS11-208ENST00000621676 IL24Q13007 206 aa8.81□□□□□ -1
VPS11-208ENST00000621676 PNLIPRP3Q17RR3 467 aa8.81□□□□□ -1
VPS11-208ENST00000621676 PRAMEF5Q5TYX0 476 aa8.81□□□□□ -1
VPS11-208ENST00000621676 Q6P435 159 aa8.81□□□□□ -1
VPS11-208ENST00000621676 DPPA2Q7Z7J5 298 aa8.81□□□□□ -1
VPS11-208ENST00000621676 LYG1Q8N1E2 194 aa8.81□□□□□ -1
VPS11-208ENST00000621676 TCTEX1D2Q8WW35 142 aa8.81□□□□□ -1
VPS11-208ENST00000621676 VKORC1Q9BQB6 163 aa8.81□□□□□ -1
VPS11-208ENST00000621676 RASL12Q9NYN1 266 aa8.81□□□□□ -1
VPS11-208ENST00000621676 RCL1Q9Y2P8 373 aaKnown RBP8.81□□□□□ -1
VPS11-208ENST00000621676 G3V3Q6 166 aa8.8□□□□□ -1
VPS11-208ENST00000621676 H0YIZ8 118 aa8.8□□□□□ -1
VPS11-208ENST00000621676 LGALS8O00214 317 aa8.8□□□□□ -1
VPS11-208ENST00000621676 SLC31A2O15432 143 aa8.8□□□□□ -1
VPS11-208ENST00000621676 SOD3P08294 240 aa8.8□□□□□ -1
VPS11-208ENST00000621676 SNRPCP09234 159 aaKnown RBP8.8□□□□□ -1
VPS11-208ENST00000621676 MYOD1P15172 320 aa8.8□□□□□ -1
VPS11-208ENST00000621676 G6PCP35575 357 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms