RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 UHRF2Q96PU4 802 aa6.03□□□□□ -1.44
NEDD9-216ENST00000620854 IGSF23A1L1A6 192 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 CEACAM18A8MTB9 384 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 TERTO14746 1132 aaKnown RBP6.02□□□□□ -1.45
NEDD9-216ENST00000620854 HIST1H1BP16401 226 aaKnown RBP6.02□□□□□ -1.45
NEDD9-216ENST00000620854 NTF3P20783 257 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 PAX6P26367 422 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 DYNLT3P51808 116 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 RAB1AP62820 205 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 SNAI3Q3KNW1 292 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 ANKRD37Q7Z713 158 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 LYPD6BQ8NI32 183 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 C22orf15Q8WYQ4 148 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 SPACA9Q96E40 222 aaPredicted RBP6.02□□□□□ -1.45
NEDD9-216ENST00000620854 GINS3Q9BRX5 216 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 TUBD1Q9UJT1 453 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 V9GYS6 101 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 EML6Q6ZMW3 1958 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 RNF212BA8MTL3 300 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 ZNF732B4DXR9 585 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 SEC14L6B5MCN3 397 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 DVL1O14640 695 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 KRASP01116 189 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 SLC23A3Q6PIS1 610 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 TGIF2LXQ8IUE1 241 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 OSR2Q8N2R0 312 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 TMEM37Q8WXS4 190 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 ZNF501Q96CX3 271 aaPredicted RBP6.02□□□□□ -1.45
NEDD9-216ENST00000620854 GNPNAT1Q96EK6 184 aaPredicted RBP6.02□□□□□ -1.45
NEDD9-216ENST00000620854 MRGPRX4Q96LA9 322 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 TXN2Q99757 166 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 TPPP3Q9BW30 176 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 PRR14LQ5THK1 2151 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 CADP27708 2225 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 SPAARA0A1B0GVQ0 90 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 K7ESF4 209 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 ADAM20O43506 726 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 PGA3P0DJD8 388 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 FUT3P21217 361 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 CLDN15P56746 228 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 Q3ZCU0 254 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 PRAMEF5Q5TYX0 476 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 PRAMEF6Q5VXH4 476 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 LIAT1Q6ZQX7 453 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 H2BFWTQ7Z2G1 175 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 ZADH2Q8N4Q0 377 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 NOXO1Q8NFA2 376 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 OR10AD1Q8NGE0 317 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 OR2Y1Q8NGV0 311 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 SLC39A7Q92504 469 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 RSG1Q9BU20 258 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 DEFB127Q9H1M4 99 aa6.02□□□□□ -1.45
NEDD9-216ENST00000620854 KLF13Q9Y2Y9 288 aaPredicted RBP6.02□□□□□ -1.45
NEDD9-216ENST00000620854 DSPP15924 2871 aaKnown RBP6.02□□□□□ -1.45
NEDD9-216ENST00000620854 ADAMTS9Q9P2N4 1935 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 HSBP1L1C9JCN9 74 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 K7N7A8 449 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 SRP19P09132 144 aaKnown RBP6.01□□□□□ -1.45
NEDD9-216ENST00000620854 IFI6P09912 130 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 FKBP2P26885 142 aaKnown RBP6.01□□□□□ -1.45
NEDD9-216ENST00000620854 RPP30P78346 268 aaKnown RBP6.01□□□□□ -1.45
NEDD9-216ENST00000620854 FAM89BQ8N5H3 189 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 ZNF385AQ96PM9 386 aaKnown RBP6.01□□□□□ -1.45
NEDD9-216ENST00000620854 UCN2Q96RP3 112 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 MRPL13Q9BYD1 178 aaKnown RBP6.01□□□□□ -1.45
NEDD9-216ENST00000620854 ZNF665Q9H7R5 613 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 STRAPQ9Y3F4 350 aaKnown RBP6.01□□□□□ -1.45
NEDD9-216ENST00000620854 C17orf112F2Z3M2 114 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 IFNL4K9M1U5 179 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 ENSAO43768 121 aaKnown RBP6.01□□□□□ -1.45
NEDD9-216ENST00000620854 CHST1O43916 411 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 CD55P08174 381 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 CCL2P13500 99 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 CD200P41217 278 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 FABP6P51161 128 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 ZNF124Q15973 351 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 WIPI1Q5MNZ9 446 aaPredicted RBP6.01□□□□□ -1.45
NEDD9-216ENST00000620854 SPSB3Q6PJ21 355 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 HIST3H2BBQ8N257 126 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 COMMD1Q8N668 190 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 TMEM252Q8N6L7 170 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 TMEM105Q8N8V8 129 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 GTF3AQ92664 365 aaKnown RBP6.01□□□□□ -1.45
NEDD9-216ENST00000620854 EXTL1Q92935 676 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 DAZAP1Q96EP5 407 aaKnown RBP6.01□□□□□ -1.45
NEDD9-216ENST00000620854 MYOTQ9UBF9 498 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 MUC22E2RYF6 1773 aaPredicted RBP6.01□□□□□ -1.45
NEDD9-216ENST00000620854 IGKV3D-11A0A0A0MRZ8 115 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 A0A1W2PQD3 144 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 PROB1E7EW31 1015 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 KLK10O43240 276 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 DHRS3O75911 302 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 IGHMP01871 453 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 HOXA6P31267 233 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 GPM6AP51674 278 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 TMEM267Q0VDI3 215 aaPredicted RBP6.01□□□□□ -1.45
NEDD9-216ENST00000620854 SSPNQ14714 243 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 DEFB109BQ30KR1 87 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 PHYHD1Q5SRE7 291 aa6.01□□□□□ -1.45
NEDD9-216ENST00000620854 ZNF774Q6NX45 483 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms