RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 ZDHHC23Q8IYP9 409 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 CISD2Q8N5K1 135 aaKnown RBP4.4□□□□□ -1.7
VPS13D-214ENST00000620676 LHX2P50458 406 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 MIC13Q5XKP0 118 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 LIAT1Q6ZQX7 453 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 MTURNQ8N3F0 131 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 GPR27Q9NS67 375 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 SPCS1Q9Y6A9 102 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 TNFSF11O14788 317 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 UCP1P25874 307 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 UBE2NP61088 152 aaKnown RBP4.4□□□□□ -1.7
VPS13D-214ENST00000620676 GNB2P62879 340 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 GKN2Q86XP6 184 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 ORAOV1Q8WV07 137 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 A0A087X0K7 114 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 A0A0B4J2E0 115 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 A0A1B0GX12 115 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 ZIC3O60481 467 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 EMP1P54849 157 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 KLHDC7BQ96G42 594 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 WISP3O95389 354 aaPredicted RBP4.4□□□□□ -1.7
VPS13D-214ENST00000620676 RPL11P62913 178 aaKnown RBP4.4□□□□□ -1.7
VPS13D-214ENST00000620676 DOLPP1Q86YN1 238 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 GBGT1Q8N5D6 347 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 G6PC2Q9NQR9 355 aa4.4□□□□□ -1.7
VPS13D-214ENST00000620676 OR8B8Q15620 311 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 TNFRSF14Q92956 283 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 MUCL1Q96DR8 90 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 C12orf49Q9H741 205 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 AKAP11Q9UKA4 1901 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 FAM157BP0CG42 384 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 C1orf194Q5T5A4 169 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 C12orf54Q6X4T0 127 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 TMEM191AQ9H0A3 160 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 LOC102725191A0A1B0GVB3 256 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 NRG2O14511 850 aaPredicted RBP4.4□□□□□ -1.71
VPS13D-214ENST00000620676 JOSD1Q15040 202 aaPredicted RBP4.4□□□□□ -1.71
VPS13D-214ENST00000620676 FDX2Q6P4F2 183 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 OR2M7Q8NG81 312 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 OR4C3Q8NH37 302 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 RGPD2P0DJD1 1756 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 PARP4Q9UKK3 1724 aaKnown RBP4.4□□□□□ -1.71
VPS13D-214ENST00000620676 SPTAN1Q13813 2472 aaKnown RBP4.4□□□□□ -1.71
VPS13D-214ENST00000620676 IGSF23A1L1A6 192 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 ZNF749O43361 778 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 SHHQ15465 462 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 CD226Q15762 336 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 SFTPA1Q8IWL2 248 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 MMP17Q9ULZ9 603 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 PSG11Q9UQ72 335 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 CD5P06127 495 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 SEC11BP0C7V7 166 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 ASB5Q8WWX0 329 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 AQP3Q92482 292 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 LRRC3BQ96PB8 259 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 ZBP1Q9H171 429 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 ECM29Q5VYK3 1845 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 hDV102S1A0JD36 115 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 C7orf71A4D174 169 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 ARL14EPLP0DKL9 152 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 GALP22466 123 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 ADMP35318 185 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 TGIF2LYQ8IUE0 185 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 CLDND2Q8NHS1 167 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.4□□□□□ -1.71
VPS13D-214ENST00000620676 SMIM8Q96KF7 97 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 ZNF355PQ9NSJ1 428 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 NKX6-3A6NJ46 265 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 GJE1A6NN92 205 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 H0YIG0 161 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 CT45A6P0DMU7 189 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 CT45A5P0DMU8 189 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 CT45A7P0DMV0 189 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 CT45A1Q5HYN5 189 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.4□□□□□ -1.712e-6■■■■□ 20.7
VPS13D-214ENST00000620676 CT45A3Q8NHU0 189 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 EPHX3Q9H6B9 360 aa4.4□□□□□ -1.71
VPS13D-214ENST00000620676 CISD1Q9NZ45 108 aaKnown RBP4.4□□□□□ -1.71
VPS13D-214ENST00000620676 IGLV3-10A0A075B6K4 115 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 LOC105371242A0A075B767 164 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 PPIAL4CA0A0B4J2A2 164 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 CTSDP07339 412 aaPredicted RBP4.39□□□□□ -1.71
VPS13D-214ENST00000620676 PPIAL4GP0DN37 164 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 PSG5Q15238 335 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 YRDCQ86U90 279 aaKnown RBP4.39□□□□□ -1.71
VPS13D-214ENST00000620676 QTRT1Q9BXR0 403 aaKnown RBP4.39□□□□□ -1.71
VPS13D-214ENST00000620676 C17orf51A8MQB3 221 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 ADH4P08319 380 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 CAMKMTQ7Z624 323 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 SPTBN2O15020 2390 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 DNAJC25-GNG10A0A024R161 153 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 HES1Q14469 280 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 AQP10Q96PS8 301 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 IGHV3-48P01763 117 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 GFRA1P56159 465 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 MOB3AQ96BX8 217 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 SLC35E2P0CK97 266 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 IGFBP2P18065 325 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 PRDX4Q13162 271 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 STPG1Q5TH74 334 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms