RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 RAB12Q6IQ22 244 aa17.56■□□□□ 0.4
NEDD4L-237ENST00000617539 ETV3LQ6ZN32 361 aa17.56■□□□□ 0.4
NEDD4L-237ENST00000617539 IZUMO1Q8IYV9 350 aa17.56■□□□□ 0.4
NEDD4L-237ENST00000617539 ZNF439Q8NDP4 499 aa17.56■□□□□ 0.4
NEDD4L-237ENST00000617539 RBMXL1Q96E39 390 aaKnown RBP17.56■□□□□ 0.4
NEDD4L-237ENST00000617539 EAF1Q96JC9 268 aaPredicted RBP17.56■□□□□ 0.4
NEDD4L-237ENST00000617539 SPACA1Q9HBV2 294 aa17.56■□□□□ 0.4
NEDD4L-237ENST00000617539 COL7A1Q02388 2944 aa17.56■□□□□ 0.4
NEDD4L-237ENST00000617539 LINC01548A6NM66 108 aa17.55■□□□□ 0.4
NEDD4L-237ENST00000617539 PF4P02776 101 aa17.55■□□□□ 0.4
NEDD4L-237ENST00000617539 GAPDHP04406 335 aaKnown RBP17.55■□□□□ 0.4
NEDD4L-237ENST00000617539 CD1AP06126 327 aa17.55■□□□□ 0.4
NEDD4L-237ENST00000617539 INSL4Q14641 139 aa17.55■□□□□ 0.4
NEDD4L-237ENST00000617539 SYT6Q5T7P8 510 aaPredicted RBP17.55■□□□□ 0.4
NEDD4L-237ENST00000617539 AWAT2Q6E213 333 aa17.55■□□□□ 0.4
NEDD4L-237ENST00000617539 SIGIRRQ6IA17 410 aa17.55■□□□□ 0.4
NEDD4L-237ENST00000617539 MOB3BQ86TA1 216 aa17.55■□□□□ 0.4
NEDD4L-237ENST00000617539 CDH26Q8IXH8 852 aa17.55■□□□□ 0.4
NEDD4L-237ENST00000617539 NANOGP1Q8N7R0 232 aa17.55■□□□□ 0.4
NEDD4L-237ENST00000617539 BPIFB6Q8NFQ5 453 aa17.55■□□□□ 0.4
NEDD4L-237ENST00000617539 OR4K15Q8NH41 348 aa17.55■□□□□ 0.4
NEDD4L-237ENST00000617539 MRAPQ8TCY5 172 aa17.55■□□□□ 0.4
NEDD4L-237ENST00000617539 RTN4IP1Q8WWV3 396 aaPredicted RBP17.55■□□□□ 0.4
NEDD4L-237ENST00000617539 ETAA1Q9NY74 926 aa17.55■□□□□ 0.4
NEDD4L-237ENST00000617539 LINC00527Q9UJ94 153 aa17.55■□□□□ 0.4
NEDD4L-237ENST00000617539 MCRIP1C9JLW8 97 aa17.54■□□□□ 0.4
NEDD4L-237ENST00000617539 MYL12BO14950 172 aa17.54■□□□□ 0.4
NEDD4L-237ENST00000617539 IGHG2P01859 326 aa17.54■□□□□ 0.4
NEDD4L-237ENST00000617539 MGMTP16455 207 aa17.54■□□□□ 0.4
NEDD4L-237ENST00000617539 ZNF134P52741 427 aa17.54■□□□□ 0.4
NEDD4L-237ENST00000617539 GP2P55259 537 aaKnown RBP17.54■□□□□ 0.4
NEDD4L-237ENST00000617539 STX19Q8N4C7 294 aa17.54■□□□□ 0.4
NEDD4L-237ENST00000617539 Q96M66 194 aa17.54■□□□□ 0.4
NEDD4L-237ENST00000617539 SELENOIQ9C0D9 397 aa17.54■□□□□ 0.4
NEDD4L-237ENST00000617539 PEX16Q9Y5Y5 336 aa17.54■□□□□ 0.4
NEDD4L-237ENST00000617539 ZNF736B4DX44 427 aaPredicted RBP17.53■□□□□ 0.4
NEDD4L-237ENST00000617539 SC5DO75845 299 aa17.53■□□□□ 0.4
NEDD4L-237ENST00000617539 RCC1P18754 421 aaPredicted RBP17.53■□□□□ 0.4
NEDD4L-237ENST00000617539 SLC35A2P78381 396 aa17.53■□□□□ 0.4
NEDD4L-237ENST00000617539 SLC25A48Q6ZT89 311 aaKnown RBP17.53■□□□□ 0.4
NEDD4L-237ENST00000617539 C18orf65Q6ZTR6 163 aa17.53■□□□□ 0.4
NEDD4L-237ENST00000617539 LINC00482Q8N8I6 264 aa17.53■□□□□ 0.4
NEDD4L-237ENST00000617539 OR1L1Q8NH94 360 aa17.53■□□□□ 0.4
NEDD4L-237ENST00000617539 CHPT1Q8WUD6 406 aa17.53■□□□□ 0.4
NEDD4L-237ENST00000617539 PLSCR3Q9NRY6 295 aa17.53■□□□□ 0.4
NEDD4L-237ENST00000617539 TRAPPC2LQ9UL33 140 aa17.53■□□□□ 0.4
NEDD4L-237ENST00000617539 FAM90A10PA6NDY2 464 aa17.52■□□□□ 0.4
NEDD4L-237ENST00000617539 FAM90A7PA6NKC0 464 aa17.52■□□□□ 0.4
NEDD4L-237ENST00000617539 SERPINE3A8MV23 424 aa17.52■□□□□ 0.4
NEDD4L-237ENST00000617539 FAM90A23PA8MXZ1 464 aa17.52■□□□□ 0.4
NEDD4L-237ENST00000617539 CRTAPO75718 401 aaPredicted RBP17.52■□□□□ 0.4
NEDD4L-237ENST00000617539 HBZP02008 142 aa17.52■□□□□ 0.4
NEDD4L-237ENST00000617539 ZNF137PP52743 207 aa17.52■□□□□ 0.4
NEDD4L-237ENST00000617539 RPL23AP62750 156 aaKnown RBP17.52■□□□□ 0.4
NEDD4L-237ENST00000617539 Q3ZCU0 254 aa17.52■□□□□ 0.4
NEDD4L-237ENST00000617539 CT45A1Q5HYN5 189 aa17.52■□□□□ 0.4
NEDD4L-237ENST00000617539 FAM27D1Q5T7N8 215 aa17.52■□□□□ 0.4
NEDD4L-237ENST00000617539 C5orf24Q7Z6I8 188 aa17.52■□□□□ 0.4
NEDD4L-237ENST00000617539 SLC35E3Q7Z769 313 aa17.52■□□□□ 0.4
NEDD4L-237ENST00000617539 NKAIN3Q8N8D7 197 aa17.52■□□□□ 0.4
NEDD4L-237ENST00000617539 Q8N9W7 124 aa17.52■□□□□ 0.4
NEDD4L-237ENST00000617539 OR10V1Q8NGI7 309 aa17.52■□□□□ 0.4
NEDD4L-237ENST00000617539 CT45A3Q8NHU0 189 aa17.52■□□□□ 0.4
NEDD4L-237ENST00000617539 TFAP2CQ92754 450 aa17.52■□□□□ 0.4
NEDD4L-237ENST00000617539 ANKRD65E5RJM6 399 aa17.51■□□□□ 0.39
NEDD4L-237ENST00000617539 OR2W3Q7Z3T1 314 aa17.51■□□□□ 0.39
NEDD4L-237ENST00000617539 TGIF2LXQ8IUE1 241 aa17.51■□□□□ 0.39
NEDD4L-237ENST00000617539 STPG2Q8N412 459 aa17.51■□□□□ 0.39
NEDD4L-237ENST00000617539 PRR18Q8N4B5 295 aa17.51■□□□□ 0.39
NEDD4L-237ENST00000617539 OR2T10Q8NGZ9 312 aa17.51■□□□□ 0.39
NEDD4L-237ENST00000617539 FAM46BQ96A09 425 aa17.51■□□□□ 0.39
NEDD4L-237ENST00000617539 RCC1LQ96I51 464 aaKnown RBP17.51■□□□□ 0.39
NEDD4L-237ENST00000617539 UQCC2Q9BRT2 126 aa17.51■□□□□ 0.39
NEDD4L-237ENST00000617539 MBNL3Q9NUK0 354 aaKnown RBP17.51■□□□□ 0.39
NEDD4L-237ENST00000617539 UBE2QL1A1L167 161 aa17.5■□□□□ 0.39
NEDD4L-237ENST00000617539 SPINT2O43291 252 aa17.5■□□□□ 0.39
NEDD4L-237ENST00000617539 FUT3P21217 361 aa17.5■□□□□ 0.39
NEDD4L-237ENST00000617539 CD1BP29016 333 aa17.5■□□□□ 0.39
NEDD4L-237ENST00000617539 GPR12P47775 334 aa17.5■□□□□ 0.39
NEDD4L-237ENST00000617539 KRTAP10-11P60412 298 aa17.5■□□□□ 0.39
NEDD4L-237ENST00000617539 C6orf183Q5T699 404 aa17.5■□□□□ 0.39
NEDD4L-237ENST00000617539 UNQ9370/PRO34162Q6UXP9 181 aa17.5■□□□□ 0.39
NEDD4L-237ENST00000617539 MRPL41Q8IXM3 137 aaKnown RBP17.5■□□□□ 0.39
NEDD4L-237ENST00000617539 ABCG5Q9H222 651 aa17.5■□□□□ 0.39
NEDD4L-237ENST00000617539 GNG12Q9UBI6 72 aa17.5■□□□□ 0.39
NEDD4L-237ENST00000617539 LSM2Q9Y333 95 aaKnown RBP17.5■□□□□ 0.39
NEDD4L-237ENST00000617539 NCBP2LA6PVI3 153 aaKnown RBP17.49■□□□□ 0.39
NEDD4L-237ENST00000617539 CA11O75493 328 aa17.49■□□□□ 0.39
NEDD4L-237ENST00000617539 GLAP06280 429 aa17.49■□□□□ 0.39
NEDD4L-237ENST00000617539 CDK1P06493 297 aa17.49■□□□□ 0.39
NEDD4L-237ENST00000617539 IL3RAP26951 378 aa17.49■□□□□ 0.39
NEDD4L-237ENST00000617539 MAPK3P27361 379 aaPredicted RBP17.49■□□□□ 0.39
NEDD4L-237ENST00000617539 THBS3P49746 956 aa17.49■□□□□ 0.39
NEDD4L-237ENST00000617539 GPR50Q13585 617 aa17.49■□□□□ 0.39
NEDD4L-237ENST00000617539 GNMTQ14749 295 aa17.49■□□□□ 0.39
NEDD4L-237ENST00000617539 TMEM30BQ3MIR4 351 aa17.49■□□□□ 0.39
NEDD4L-237ENST00000617539 C6orf141Q5SZD1 244 aa17.49■□□□□ 0.39
NEDD4L-237ENST00000617539 RNLSQ5VYX0 342 aa17.49■□□□□ 0.39
NEDD4L-237ENST00000617539 C8orf86Q6ZUL3 223 aa17.49■□□□□ 0.39
NEDD4L-237ENST00000617539 LRRTM1Q86UE6 522 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms