RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 C19orf67A6NJJ6 358 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 KISS1Q15726 138 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 INO80CQ6PI98 192 aaPredicted RBP11.12□□□□□ -0.63
TCF4-248ENST00000616053 C7orf69Q9H7B7 122 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 RALGAPA1Q6GYQ0 2036 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 SYNGR1O43759 233 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 CA2P00918 260 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 COTL1Q14019 142 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 HIKESHIQ53FT3 197 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 C1QL3Q5VWW1 255 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 ADAT3Q96EY9 351 aaPredicted RBP11.12□□□□□ -0.63
TCF4-248ENST00000616053 ARNTLO00327 626 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 HPXP02790 462 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 ASAH2BP0C7U1 165 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 TMEM42Q69YG0 159 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 CCL13Q99616 98 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 ZNF768Q9H5H4 540 aaKnown RBP11.12□□□□□ -0.63
TCF4-248ENST00000616053 RIMBP3CA6NJZ7 1639 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 RIMBP3BA6NNM3 1639 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 PPIAL4CA0A0B4J2A2 164 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 IFNL4K9M1U5 179 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 PPIAL4GP0DN37 164 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 DHRS2Q13268 280 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 SORT1Q99523 831 aa11.12□□□□□ -0.63
TCF4-248ENST00000616053 SLC17A2O00624 439 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 CTF1Q16619 201 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 S100A7L2Q5SY68 101 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 AFMIDQ63HM1 303 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 B9D1Q9UPM9 204 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 TRGC1P0CF51 173 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 PRR35P0CG20 571 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 DRD3P35462 400 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 TEX30Q5JUR7 227 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 PWWP2BQ6NUJ5 590 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 ERASQ7Z444 233 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 COLQQ9Y215 455 aaPredicted RBP11.11□□□□□ -0.63
TCF4-248ENST00000616053 GPR45Q9Y5Y3 372 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 SCN9AQ15858 1988 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 IGKV3D-20A0A0C4DH25 116 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 RER1O15258 196 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 CD74P04233 296 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 FCGR3AP08637 254 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 CD69Q07108 199 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 OVCH2Q7RTZ1 564 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 LDLRAD3Q86YD5 345 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 RBFOX1Q9NWB1 397 aaKnown RBP11.11□□□□□ -0.63
TCF4-248ENST00000616053 GTF3C1Q12789 2109 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 RIMBP3Q9UFD9 1639 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 MBLAC1A4D2B0 266 aaPredicted RBP11.11□□□□□ -0.63
TCF4-248ENST00000616053 MMP11P24347 488 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 HLA-DRB5Q30154 266 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 GAPTQ8N292 157 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 NFAM1Q8NET5 270 aaPredicted RBP11.11□□□□□ -0.63
TCF4-248ENST00000616053 HSPB7Q9UBY9 170 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 GEMIN2O14893 280 aaKnown RBP11.11□□□□□ -0.63
TCF4-248ENST00000616053 CCSMST1Q4G0I0 132 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 OR5H6Q8NGV6 325 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 OR6X1Q8NH79 312 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 SLC39A13Q96H72 371 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 A0A0G2JLM5 398 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 CD99P14209 185 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 GPX3P22352 226 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 WDTC1Q8N5D0 677 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 OR2C3Q8N628 320 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 TDRD6O60522 2096 aaKnown RBP11.11□□□□□ -0.63
TCF4-248ENST00000616053 A0A087WX48 190 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 NKX2-8O15522 239 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 APCSP02743 223 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 KLF9Q13886 244 aaPredicted RBP11.11□□□□□ -0.63
TCF4-248ENST00000616053 FCN2Q15485 313 aa11.11□□□□□ -0.63
TCF4-248ENST00000616053 ADAD2Q8NCV1 583 aaKnown RBP11.11□□□□□ -0.63
TCF4-248ENST00000616053 OPN3Q9H1Y3 402 aaPredicted RBP11.11□□□□□ -0.63
TCF4-248ENST00000616053 FMODQ06828 376 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 ASAH1Q13510 395 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 OR2Y1Q8NGV0 311 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 OR2W1Q9Y3N9 320 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 CHST2Q9Y4C5 530 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 TRDV1A0A1B0GX56 115 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 SRSF10O75494 262 aaKnown RBP11.1□□□□□ -0.63
TCF4-248ENST00000616053 B4GALNT1Q00973 533 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 SRSF7Q16629 238 aaKnown RBP eCLIP11.1□□□□□ -0.63
TCF4-248ENST00000616053 SLC6A13Q9NSD5 602 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 AKAP6Q13023 2319 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 RBPMSQ93062 196 aaKnown RBP11.1□□□□□ -0.63
TCF4-248ENST00000616053 TMEM38AQ9H6F2 299 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 ZNF696Q9H7X3 374 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 RAB29O14966 203 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 CSF2RBP32927 897 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 HCP5Q6MZN7 132 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 LINC00615Q96LM1 132 aaPredicted RBP11.1□□□□□ -0.63
TCF4-248ENST00000616053 MANBALQ9NQG1 85 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 TMEM95Q3KNT9 176 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 AMER3Q8N944 861 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 C10orf90Q96M02 699 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 ZNF407Q9C0G0 2248 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 DEPDC5O75140 1603 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 ABCA9Q8IUA7 1624 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 KBTBD11O94819 623 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 ALPLP05186 524 aa11.1□□□□□ -0.63
TCF4-248ENST00000616053 PSG9Q00887 426 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms