RNA–Protein interactions for RNA: ENST00000614998.4

PER3-209, Transcript of period circadian regulator 3, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene PER3, Length 6,261 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PER3-209	ENST00000614998	TMEM255A	Q5JRV8	349 aa		11.58	□□□□□ -0.56
PER3-209	ENST00000614998		Q9N2K0	584 aa		11.58	□□□□□ -0.56
PER3-209	ENST00000614998	TOPAZ1	Q8N9V7	1692 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	RBFOX3	A6NFN3	312 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	CDC42EP2	O14613	210 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	RPL27A	P46776	148 aa	Known RBP	11.57	□□□□□ -0.56
PER3-209	ENST00000614998	COX14	Q96I36	57 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	TMEM204	Q9BSN7	226 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	BET1L	Q9NYM9	111 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	EXOG	Q9Y2C4	368 aa	Known RBP	11.57	□□□□□ -0.56
PER3-209	ENST00000614998	hCG_38984	A0A1B0GV85	526 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	KLF9	Q13886	244 aa	Predicted RBP	11.57	□□□□□ -0.56
PER3-209	ENST00000614998	UQCC3	Q6UW78	93 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	SSX8	Q7RTT4	187 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	OVCH2	Q7RTZ1	564 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	OR2T10	Q8NGZ9	312 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	RAB29	O14966	203 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	HYPM	O75409	117 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	STAG3L2	P0CL84	134 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	PSG2	P11465	335 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	HCP5	Q6MZN7	132 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	NFAM1	Q8NET5	270 aa	Predicted RBP	11.57	□□□□□ -0.56
PER3-209	ENST00000614998	OR8G5	Q8NG78	346 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	OR2W1	Q9Y3N9	320 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	PAGE4	O60829	102 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	FAM106A	Q4KMX7	169 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	BVES	Q8NE79	360 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	CACNA1C	Q13936	2221 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	MPDU1	O75352	247 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	GZMK	P49863	264 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	ZNF519	Q8TB69	540 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	PAXX	Q9BUH6	204 aa		11.57	□□□□□ -0.56
PER3-209	ENST00000614998	ZNF256	Q9Y2P7	627 aa	Predicted RBP	11.57	□□□□□ -0.56
PER3-209	ENST00000614998	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	11.56	□□□□□ -0.56
PER3-209	ENST00000614998	MGAT2	Q10469	447 aa		11.56	□□□□□ -0.56
PER3-209	ENST00000614998	MRM1	Q6IN84	353 aa	Known RBP	11.56	□□□□□ -0.56
PER3-209	ENST00000614998	TMEM56-RWDD3	S4R434	201 aa		11.56	□□□□□ -0.56
PER3-209	ENST00000614998	TMEM189	A5PLL7	270 aa		11.56	□□□□□ -0.56
PER3-209	ENST00000614998		M0R143	59 aa		11.56	□□□□□ -0.56
PER3-209	ENST00000614998	FXYD1	O00168	92 aa		11.56	□□□□□ -0.56
PER3-209	ENST00000614998	ATG4D	Q86TL0	474 aa	Predicted RBP	11.56	□□□□□ -0.56
PER3-209	ENST00000614998	WDR54	Q9H977	334 aa		11.56	□□□□□ -0.56
PER3-209	ENST00000614998	RGPD5	Q99666	1765 aa		11.56	□□□□□ -0.56
PER3-209	ENST00000614998	HOXD4	P09016	255 aa	Predicted RBP	11.56	□□□□□ -0.56
PER3-209	ENST00000614998	P2RY1	P47900	373 aa		11.56	□□□□□ -0.56
PER3-209	ENST00000614998	PMS2CL	Q68D20	193 aa		11.56	□□□□□ -0.56
PER3-209	ENST00000614998	HSPB8	Q9UJY1	196 aa		11.56	□□□□□ -0.56
PER3-209	ENST00000614998	ZIC1	Q15915	447 aa		11.56	□□□□□ -0.56
PER3-209	ENST00000614998	ITLN1	Q8WWA0	313 aa		11.56	□□□□□ -0.56
PER3-209	ENST00000614998	PITPNC1	Q9UKF7	332 aa		11.56	□□□□□ -0.56
PER3-209	ENST00000614998	CBY1	Q9Y3M2	126 aa		11.56	□□□□□ -0.56
PER3-209	ENST00000614998	PRR19	A6NJB7	356 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	ISLR	O14498	428 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	SPINT1	O43278	529 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	PEX11B	O96011	259 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	ZNF880	Q6PDB4	577 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	CLEC18B	Q6UXF7	455 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	CLRN3	Q8NCR9	226 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	SIRT7	Q9NRC8	400 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	NUP98	P52948	1817 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	TMEM229A	B2RXF0	380 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	APCS	P02743	223 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	WDR25	Q64LD2	544 aa	Predicted RBP	11.55	□□□□□ -0.56
PER3-209	ENST00000614998	CALHM1	Q8IU99	346 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	PRSS50	Q9UI38	385 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	CXorf1	O96002	111 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	IER3	P46695	156 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	MVD	P53602	400 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	PSG6	Q00889	435 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	FAM214B	Q7L5A3	538 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	C10orf35	Q96D05	121 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	ZNF385A	Q96PM9	386 aa	Known RBP	11.55	□□□□□ -0.56
PER3-209	ENST00000614998	IGKV3-20	P01619	116 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	NMU	P48645	174 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	UCP2	P55851	309 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	CDC20	Q12834	499 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	UNQ9370/PRO34162	Q6UXP9	181 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	SLC35E3	Q7Z769	313 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	MBP	P02686	304 aa	Predicted RBP	11.55	□□□□□ -0.56
PER3-209	ENST00000614998	NAT2	P11245	290 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	PDLIM4	P50479	330 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	SUCLG1	P53597	346 aa	Known RBP	11.55	□□□□□ -0.56
PER3-209	ENST00000614998	FAM216A	Q8WUB2	273 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	OIT3	Q8WWZ8	545 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	ANAPC16	Q96DE5	110 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	PHYHIPL	Q96FC7	376 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	FLRT3	Q9NZU0	649 aa		11.55	□□□□□ -0.56
PER3-209	ENST00000614998	THY1	P04216	161 aa		11.54	□□□□□ -0.56
PER3-209	ENST00000614998	CELA2A	P08217	269 aa		11.54	□□□□□ -0.56
PER3-209	ENST00000614998	ARF6	P62330	175 aa		11.54	□□□□□ -0.56
PER3-209	ENST00000614998	STPG3	Q8N7X2	389 aa		11.54	□□□□□ -0.56
PER3-209	ENST00000614998	DPH3P1	Q9H4G8	78 aa		11.54	□□□□□ -0.56
PER3-209	ENST00000614998	NKX2-6	A6NCS4	301 aa		11.54	□□□□□ -0.56
PER3-209	ENST00000614998	CEACAM18	A8MTB9	384 aa		11.54	□□□□□ -0.56
PER3-209	ENST00000614998	PLAU	P00749	431 aa		11.54	□□□□□ -0.56
PER3-209	ENST00000614998	COL13A1	Q5TAT6	717 aa	Predicted RBP	11.54	□□□□□ -0.56
PER3-209	ENST00000614998	PGLYRP3	Q96LB9	341 aa		11.54	□□□□□ -0.56
PER3-209	ENST00000614998	HIST1H1B	P16401	226 aa	Known RBP	11.54	□□□□□ -0.56
PER3-209	ENST00000614998	GPA33	Q99795	319 aa		11.54	□□□□□ -0.56
PER3-209	ENST00000614998	RCC2	Q9P258	522 aa	Known RBP	11.54	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms