RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 PLP2Q04941 152 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 SLC38A11Q08AI6 406 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 P2RY6Q15077 328 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 TMEM40Q8WWA1 233 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 WDYHV1Q96HA8 205 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.37□□□□□ -1.71
VPS13D-213ENST00000613099 TMEM38BQ9NVV0 291 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 A0A1B0GTI1 187 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 COX6CP09669 75 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 DRD1P21728 446 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 ID2Q02363 134 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 ZNF788Q6ZQV5 615 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 OR2V2Q96R30 315 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 TMEM126AQ9H061 195 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 GLIPR2Q9H4G4 154 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 PLAC1Q9HBJ0 212 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 TAAR2Q9P1P5 351 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 A0A0G2JLL6 359 aaPredicted RBP4.37□□□□□ -1.71
VPS13D-213ENST00000613099 A0A1W2PP11 408 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 NBASA2RRP1 2371 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 TMEM88BA6NKF7 163 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 OPRM1P35372 400 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 PRRT2Q7Z6L0 340 aaPredicted RBP4.37□□□□□ -1.71
VPS13D-213ENST00000613099 CUL9Q8IWT3 2517 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 NUDT8Q8WV74 236 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 OR2W1Q9Y3N9 320 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 LOC105371242A0A075B767 164 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 PPIAL4CA0A0B4J2A2 164 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 PPIAL4GP0DN37 164 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 SSTR5P35346 364 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 DCAF4L2Q8NA75 395 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 DOK4Q8TEW6 326 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 MYO9AB2RTY4 2548 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 CKAP5Q14008 2032 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 TRBV6-7A0A0A0MS04 114 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 VDAC1P21796 283 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 MFAP2P55001 183 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 SOX8P57073 446 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 NPEPL1Q8NDH3 523 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 MBLAC1A4D2B0 266 aaPredicted RBP4.37□□□□□ -1.71
VPS13D-213ENST00000613099 OOEPA6NGQ2 149 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 PLGLB1Q02325 96 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 TM4SF18Q96CE8 201 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 PIGLQ9Y2B2 252 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 PMP22Q01453 160 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 RPS19BP1Q86WX3 136 aaKnown RBP4.37□□□□□ -1.71
VPS13D-213ENST00000613099 OR51E1Q8TCB6 317 aa4.37□□□□□ -1.71
VPS13D-213ENST00000613099 MYADML2A6NDP7 307 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 P2RY10O00398 339 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 IL2RAP01589 272 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 RBM11P57052 281 aaKnown RBP4.36□□□□□ -1.71
VPS13D-213ENST00000613099 DAZLQ92904 295 aaKnown RBP4.36□□□□□ -1.71
VPS13D-213ENST00000613099 SLC6A18Q96N87 628 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 LINC00470Q9BZP3 86 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 FOXD3Q9UJU5 478 aaPredicted RBP4.36□□□□□ -1.71
VPS13D-213ENST00000613099 CA3P07451 260 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 IFITM1P13164 125 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 HERVK_113P61574 105 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 UBALD1Q8TB05 177 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 HEYLQ9NQ87 328 aaPredicted RBP4.36□□□□□ -1.71
VPS13D-213ENST00000613099 NUP210Q8TEM1 1887 aaPredicted RBP4.36□□□□□ -1.71
VPS13D-213ENST00000613099 PSMB11A5LHX3 300 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 OR11H12B2RN74 326 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 EWSR1Q01844 656 aaKnown RBP eCLIP4.36□□□□□ -1.71
VPS13D-213ENST00000613099 C5orf17Q8NAS9 161 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 OR11H1Q8NG94 326 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 OR11H2Q8NH07 326 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 PFN4Q8NHR9 129 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 GAGE12HA6NDE8 117 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 CHST1O43916 411 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 OR9G9P0C7N8 305 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 UCNP55089 124 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 IER5LQ5T953 404 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 LIAT1Q6ZQX7 453 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 IL1F10Q8WWZ1 152 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 KIR2DS5A0A0G2JLQ3 304 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 LOC107984156A0A0G2JMH3 177 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 A0A0G2JNG1 304 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 KIR2DS3K7RE56 304 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 NKX2-8O15522 239 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 C1QL1O75973 258 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 WNT5AP41221 380 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 SPINT3P49223 89 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 KIR2DS5Q14953 304 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 ARL17AQ8IVW1 177 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 BOD1L2Q8IYS8 172 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 OR52M1Q8NGK5 317 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 DOCK11Q5JSL3 2073 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 TRBV5-3A0A0A0MS03 114 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 IGHV2OR16-5A0A0B4J2B6 119 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 C1orf105O95561 183 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 LIM2P55344 173 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 SRSF3P84103 164 aaKnown RBP4.36□□□□□ -1.71
VPS13D-213ENST00000613099 ACTL10Q5JWF8 245 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 ANKRD37Q7Z713 158 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 CLDND2Q8NHS1 167 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 MMABQ96EY8 250 aaPredicted RBP4.36□□□□□ -1.71
VPS13D-213ENST00000613099 FAM157CP0CG43 387 aa4.36□□□□□ -1.71
VPS13D-213ENST00000613099 MRPS11P82912 194 aaKnown RBP4.36□□□□□ -1.71
VPS13D-213ENST00000613099 CD226Q15762 336 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms