RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 AKR1D1P51857 326 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 RAB1AP62820 205 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 SPIN3Q5JUX0 258 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 GCNT2Q8N0V5 402 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 HSD17B11Q8NBQ5 300 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 OR5P3Q8WZ94 311 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 BCL2L14Q9BZR8 327 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 PLEKHF2Q9H8W4 249 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 GP6Q9HCN6 339 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 BIN3Q9NQY0 253 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 CLCF1Q9UBD9 225 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 IL36RNQ9UBH0 155 aa12.51□□□□□ -0.41
CDH1-213ENST00000612417 IGKV1-6A0A0C4DH72 117 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 IGSF23A1L1A6 192 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 OR5B21A6NL26 309 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 NGFP01138 241 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 RPL35P42766 123 aaKnown RBP12.5□□□□□ -0.41
CDH1-213ENST00000612417 OR8G5Q8NG78 346 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 SLC25A31Q9H0C2 315 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 SMDT1Q9H4I9 107 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 GLRX2Q9NS18 164 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 MPC1Q9Y5U8 109 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 CACNA1GO43497 2377 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 SPENQ96T58 3664 aaKnown RBP12.5□□□□□ -0.41
CDH1-213ENST00000612417 A0A1B0GWJ7 208 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 H0Y980 276 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 SYNGR1O43759 233 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 CLN5O75503 358 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 C1QL1O75973 258 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 PRH1P02810 166 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 ID3Q02535 119 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 PLP2Q04941 152 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 FBXW9Q5XUX1 488 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 ZNF880Q6PDB4 577 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 PCSK4Q6UW60 755 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 CMTM1Q8IZ96 169 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 CNEP1R1Q8N9A8 125 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 OR5D13Q8NGL4 314 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 MRPL30Q8TCC3 161 aaKnown RBP12.5□□□□□ -0.41
CDH1-213ENST00000612417 ABHD17AQ96GS6 310 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 HIST1H2AAQ96QV6 131 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 PBDC1Q9BVG4 233 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 TUBA4BQ9H853 241 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 SSUH2Q9Y2M2 353 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 PIEZO2Q9H5I5 2752 aa12.5□□□□□ -0.41
CDH1-213ENST00000612417 ATMQ13315 3056 aa12.49□□□□□ -0.41
CDH1-213ENST00000612417 PIGBOS1A0A0B4J2F0 54 aa12.49□□□□□ -0.41
CDH1-213ENST00000612417 FAM24AA6NFZ4 105 aa12.49□□□□□ -0.41
CDH1-213ENST00000612417 UMAD1C9J7I0 102 aa12.49□□□□□ -0.41
CDH1-213ENST00000612417 ADAM20O43506 726 aa12.49□□□□□ -0.41
CDH1-213ENST00000612417 WNT2P09544 360 aa12.49□□□□□ -0.41
CDH1-213ENST00000612417 BAXQ07812 192 aa12.49□□□□□ -0.41
CDH1-213ENST00000612417 IL24Q13007 206 aa12.49□□□□□ -0.41
CDH1-213ENST00000612417 ZNF573Q86YE8 665 aa12.49□□□□□ -0.41
CDH1-213ENST00000612417 TMEM252Q8N6L7 170 aa12.49□□□□□ -0.41
CDH1-213ENST00000612417 SUMF2Q8NBJ7 301 aa12.49□□□□□ -0.41
CDH1-213ENST00000612417 WRBO00258 174 aa12.49□□□□□ -0.41
CDH1-213ENST00000612417 CRYABP02511 175 aaKnown RBP12.49□□□□□ -0.41
CDH1-213ENST00000612417 GNG3P63215 75 aa12.49□□□□□ -0.41
CDH1-213ENST00000612417 C5orf24Q7Z6I8 188 aa12.49□□□□□ -0.41
CDH1-213ENST00000612417 PLPPR1Q8TBJ4 325 aa12.49□□□□□ -0.41
CDH1-213ENST00000612417 NEK7Q8TDX7 302 aa12.49□□□□□ -0.41
CDH1-213ENST00000612417 PKIBQ9C010 78 aa12.49□□□□□ -0.41
CDH1-213ENST00000612417 EIF5A2Q9GZV4 153 aaKnown RBP12.49□□□□□ -0.41
CDH1-213ENST00000612417 ANKRD30BLA7E2S9 258 aa12.48□□□□□ -0.41
CDH1-213ENST00000612417 SSSCA1O60232 199 aa12.48□□□□□ -0.41
CDH1-213ENST00000612417 SLC34A2O95436 690 aa12.48□□□□□ -0.41
CDH1-213ENST00000612417 IFNA4P05014 189 aa12.48□□□□□ -0.41
CDH1-213ENST00000612417 TBR1Q16650 682 aa12.48□□□□□ -0.41
CDH1-213ENST00000612417 RNF212Q495C1 297 aa12.48□□□□□ -0.41
CDH1-213ENST00000612417 AWAT1Q58HT5 328 aa12.48□□□□□ -0.41
CDH1-213ENST00000612417 TMEM182Q6ZP80 229 aaPredicted RBP12.48□□□□□ -0.41
CDH1-213ENST00000612417 TMEM171Q8WVE6 324 aa12.48□□□□□ -0.41
CDH1-213ENST00000612417 CABLES2Q9BTV7 478 aa12.48□□□□□ -0.41
CDH1-213ENST00000612417 SLC35B3Q9H1N7 401 aa12.48□□□□□ -0.41
CDH1-213ENST00000612417 CCL28Q9NRJ3 127 aa12.48□□□□□ -0.41
CDH1-213ENST00000612417 TP53TG5Q9Y2B4 290 aa12.48□□□□□ -0.41
CDH1-213ENST00000612417 AHRRA9YTQ3 701 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 NPIPB11E5RHQ5 1161 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 K7ENP7 123 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 NDUFS6O75380 124 aaKnown RBP12.47□□□□□ -0.41
CDH1-213ENST00000612417 ATP6V0CP27449 155 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 WNT5AP41221 380 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 HIKESHIQ53FT3 197 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 CXorf66Q5JRM2 361 aaPredicted RBP12.47□□□□□ -0.41
CDH1-213ENST00000612417 INO80CQ6PI98 192 aaPredicted RBP12.47□□□□□ -0.41
CDH1-213ENST00000612417 ETV3LQ6ZN32 361 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 FAM214BQ7L5A3 538 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 ODF3L1Q8IXM7 274 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 C9orf106Q8NAJ2 232 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 FAM213BQ8TBF2 198 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 CLCC1Q96S66 551 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 RPS10P5Q9NQ39 176 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 INTS1Q8N201 2190 aaKnown RBP12.47□□□□□ -0.41
CDH1-213ENST00000612417 PTPRQQ9UMZ3 2332 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 TRAV24A0A0B4J272 114 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 HSPB6O14558 160 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 HSD17B6O14756 317 aa12.47□□□□□ -0.41
CDH1-213ENST00000612417 PGLYRP1O75594 196 aaPredicted RBP12.47□□□□□ -0.41
CDH1-213ENST00000612417 SLC25A6P12236 298 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms