RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 DNASE2BQ8WZ79 361 aa10.77□□□□□ -0.69
CDH1-212ENST00000611625 TPPP3Q9BW30 176 aa10.77□□□□□ -0.69
CDH1-212ENST00000611625 OOEPA6NGQ2 149 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 PRRG2O14669 202 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 ZNF83P51522 516 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 NSUN5P2Q63ZY6 315 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 H1FOOQ8IZA3 346 aaPredicted RBP10.76□□□□□ -0.69
CDH1-212ENST00000611625 OR52M1Q8NGK5 317 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 ACY3Q96HD9 319 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 RTN4RQ9BZR6 473 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 H0Y980 276 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 PMS2CLQ68D20 193 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 DPPA3Q6W0C5 159 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 SHISA5Q8N114 240 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 R3HDM4Q96D70 268 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 TRPM7Q96QT4 1865 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 FAM90A10PA6NDY2 464 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 FAM90A18PA6NE21 464 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 FAM90A16PA6NEW6 464 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 FAM90A20PA6NIJ5 464 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 FAM90A8PA6NJQ4 464 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 FAM90A7PA6NKC0 464 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 FAM90A22PA8MWA6 464 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 FAM90A12PA8MX19 464 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 FAM90A5PA8MXJ8 464 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 FAM90A23PA8MXZ1 464 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 CNIH1O95406 144 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 FAM90A15PP0C7V4 464 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 FAM90A13PP0C7W8 464 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 FAM90A14PP0C7W9 464 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 FAM90A24PP0C7X0 464 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 PPP1CCP36873 323 aaKnown RBP10.76□□□□□ -0.69
CDH1-212ENST00000611625 PMS2P11Q13670 270 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 C9orf152Q5JTZ5 239 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 RIPPLY2Q5TAB7 128 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 MED12Q93074 2177 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 BSCL2Q96G97 398 aaPredicted RBP10.76□□□□□ -0.69
CDH1-212ENST00000611625 LRFN3Q9BTN0 628 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 RNF122Q9H9V4 155 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 ZNF891A8MT65 544 aaPredicted RBP10.76□□□□□ -0.69
CDH1-212ENST00000611625 COX7A2P2O60397 106 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 NPIPB7O75200 414 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 IGLV3-19P01714 112 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 IGHV3-13P01766 116 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 IGHV3-7P01780 117 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 BCL2P10415 239 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 RHOBP62745 196 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 PCOLCEQ15113 449 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 EIF4E3Q8N5X7 224 aaKnown RBP10.76□□□□□ -0.69
CDH1-212ENST00000611625 SLC25A28Q96A46 364 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 ABHD14BQ96IU4 210 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 R4GN57 208 aa10.76□□□□□ -0.69
CDH1-212ENST00000611625 C11orf94C9JXX5 98 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 MST1P26927 711 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 RAB7AP51149 207 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 TMEM187Q14656 261 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 K7EQM0 130 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 CNN1P51911 297 aaKnown RBP10.75□□□□□ -0.69
CDH1-212ENST00000611625 KRTDAPP60985 99 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 FBXW9Q5XUX1 488 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 PRR27Q6MZM9 219 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 FGF11Q92914 225 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 ZNHIT1O43257 154 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 DANCRP0C864 163 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 GNG10P50151 68 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 DHRS7BQ6IAN0 325 aaPredicted RBP10.75□□□□□ -0.69
CDH1-212ENST00000611625 MDP1Q86V88 176 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 MYPOPQ86VE0 399 aaPredicted RBP10.75□□□□□ -0.69
CDH1-212ENST00000611625 ZBTB34Q8NCN2 500 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 RSG1Q9BU20 258 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 TCF20Q9UGU0 1960 aaKnown RBP10.75□□□□□ -0.69
CDH1-212ENST00000611625 CTXND1A0A1B0GTU2 59 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 B4E171 279 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 C21orf140B9A014 251 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 G6PCP35575 357 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 TSPAN7P41732 249 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 TOMM20LQ6UXN7 152 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 SLC25A40Q8TBP6 338 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 PACRGQ96M98 296 aaPredicted RBP10.75□□□□□ -0.69
CDH1-212ENST00000611625 GPHA2Q96T91 129 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 SRXN1Q9BYN0 137 aa10.75□□□□□ -0.69
CDH1-212ENST00000611625 LOC390937A0A1W2PQ73 354 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 SERF2P84101 59 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 DCAF10Q5QP82 559 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 MRPL30Q8TCC3 161 aaKnown RBP10.74□□□□□ -0.69
CDH1-212ENST00000611625 USB1Q9BQ65 265 aaKnown RBP10.74□□□□□ -0.69
CDH1-212ENST00000611625 SH3BGRL3Q9H299 93 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 LYRM2Q9NU23 88 aaPredicted RBP10.74□□□□□ -0.69
CDH1-212ENST00000611625 TUBD1Q9UJT1 453 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 SLC45A2Q9UMX9 530 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 CARHSP1Q9Y2V2 147 aaKnown RBP10.74□□□□□ -0.69
CDH1-212ENST00000611625 THSD7BQ9C0I4 1608 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 RALGAPA1Q6GYQ0 2036 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 S100A7P31151 101 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 FHITP49789 147 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 GNB1P62873 340 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 HIST1H3AP68431 136 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 RSPO3Q9BXY4 272 aaPredicted RBP10.74□□□□□ -0.69
CDH1-212ENST00000611625 OR5H1A6NKK0 313 aa10.74□□□□□ -0.69
CDH1-212ENST00000611625 SHISA7A6NL88 538 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms