RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 STRADBQ9C0K7 418 aa19.11■□□□□ 0.65
SHANK2-220ENST00000608988 IGKV1-6A0A0C4DH72 117 aa19.11■□□□□ 0.65
SHANK2-220ENST00000608988 IGHV5-10-1A0A0J9YXX1 117 aa19.11■□□□□ 0.65
SHANK2-220ENST00000608988 MMP7P09237 267 aaPredicted RBP19.11■□□□□ 0.65
SHANK2-220ENST00000608988 TMEM267Q0VDI3 215 aaPredicted RBP19.11■□□□□ 0.65
SHANK2-220ENST00000608988 ZNF324BQ6AW86 544 aaPredicted RBP19.11■□□□□ 0.65
SHANK2-220ENST00000608988 LCN15Q6UWW0 184 aa19.11■□□□□ 0.65
SHANK2-220ENST00000608988 TP53TG5Q9Y2B4 290 aa19.11■□□□□ 0.65
SHANK2-220ENST00000608988 TNRC6BQ9UPQ9 1833 aaKnown RBP19.1■□□□□ 0.65
SHANK2-220ENST00000608988 CEBPZOSA8MTT3 80 aa19.1■□□□□ 0.65
SHANK2-220ENST00000608988 TMEM250H0YL14 139 aa19.1■□□□□ 0.65
SHANK2-220ENST00000608988 PRSS12P56730 875 aa19.1■□□□□ 0.65
SHANK2-220ENST00000608988 TMEM241Q24JQ0 296 aa19.1■□□□□ 0.65
SHANK2-220ENST00000608988 CEACAM21Q3KPI0 293 aa19.1■□□□□ 0.65
SHANK2-220ENST00000608988 NCR3LG1Q68D85 454 aa19.1■□□□□ 0.65
SHANK2-220ENST00000608988 ZNF880Q6PDB4 577 aa19.1■□□□□ 0.65
SHANK2-220ENST00000608988 PCSK4Q6UW60 755 aa19.1■□□□□ 0.65
SHANK2-220ENST00000608988 RSG1Q9BU20 258 aa19.1■□□□□ 0.65
SHANK2-220ENST00000608988 DUSP23Q9BVJ7 150 aa19.1■□□□□ 0.65
SHANK2-220ENST00000608988 PSENENQ9NZ42 101 aa19.1■□□□□ 0.65
SHANK2-220ENST00000608988 CDH23Q9H251 3354 aa19.1■□□□□ 0.65
SHANK2-220ENST00000608988 MAP1LC3B2A6NCE7 125 aa19.09■□□□□ 0.65
SHANK2-220ENST00000608988 TRAPPC2LH3BP13 241 aa19.09■□□□□ 0.65
SHANK2-220ENST00000608988 PDLIM4P50479 330 aa19.09■□□□□ 0.65
SHANK2-220ENST00000608988 PRDX4Q13162 271 aa19.09■□□□□ 0.65
SHANK2-220ENST00000608988 CDCP2Q5VXM1 449 aa19.09■□□□□ 0.65
SHANK2-220ENST00000608988 ALKBH3Q96Q83 286 aaPredicted RBP19.09■□□□□ 0.65
SHANK2-220ENST00000608988 REPIN1Q9BWE0 567 aaKnown RBP19.09■□□□□ 0.65
SHANK2-220ENST00000608988 MAP1LC3BQ9GZQ8 125 aa19.09■□□□□ 0.65
SHANK2-220ENST00000608988 A0A0G2JRQ6 117 aa19.09■□□□□ 0.65
SHANK2-220ENST00000608988 DEGS1O15121 323 aa19.09■□□□□ 0.65
SHANK2-220ENST00000608988 KBTBD11O94819 623 aa19.09■□□□□ 0.65
SHANK2-220ENST00000608988 HLA-HP01893 362 aa19.09■□□□□ 0.65
SHANK2-220ENST00000608988 PATE4P0C8F1 98 aa19.09■□□□□ 0.65
SHANK2-220ENST00000608988 C4orf17Q53FE4 359 aa19.09■□□□□ 0.65
SHANK2-220ENST00000608988 ZDHHC23Q8IYP9 409 aa19.09■□□□□ 0.65
SHANK2-220ENST00000608988 MRPL30Q8TCC3 161 aaKnown RBP19.09■□□□□ 0.65
SHANK2-220ENST00000608988 NEK7Q8TDX7 302 aa19.09■□□□□ 0.65
SHANK2-220ENST00000608988 CLDN23Q96B33 292 aa19.09■□□□□ 0.65
SHANK2-220ENST00000608988 CCDC74BQ96LY2 380 aa19.09■□□□□ 0.65
SHANK2-220ENST00000608988 OR5B12Q96R08 314 aa19.09■□□□□ 0.65
SHANK2-220ENST00000608988 WDR61Q9GZS3 305 aaKnown RBP19.09■□□□□ 0.65
SHANK2-220ENST00000608988 PRSS50Q9UI38 385 aa19.09■□□□□ 0.65
SHANK2-220ENST00000608988 TNRC18O15417 2968 aaPredicted RBP19.09■□□□□ 0.65
SHANK2-220ENST00000608988 CCDC163A0A0D9SF12 145 aa19.08■□□□□ 0.65
SHANK2-220ENST00000608988 CD300LBA8K4G0 201 aa19.08■□□□□ 0.65
SHANK2-220ENST00000608988 FAM90A26D6RGX4 464 aa19.08■□□□□ 0.65
SHANK2-220ENST00000608988 AMBPP02760 352 aa19.08■□□□□ 0.65
SHANK2-220ENST00000608988 FGF5P12034 268 aa19.08■□□□□ 0.65
SHANK2-220ENST00000608988 NTF4P34130 210 aa19.08■□□□□ 0.65
SHANK2-220ENST00000608988 FAM3BP58499 235 aaPredicted RBP19.08■□□□□ 0.65
SHANK2-220ENST00000608988 CLN3Q13286 438 aa19.08■□□□□ 0.65
SHANK2-220ENST00000608988 GGNQ86UU5 652 aa19.08■□□□□ 0.65
SHANK2-220ENST00000608988 OR10J5Q8NHC4 309 aa19.08■□□□□ 0.65
SHANK2-220ENST00000608988 TMEM45BQ96B21 275 aa19.08■□□□□ 0.65
SHANK2-220ENST00000608988 SMIM7Q9BQ49 75 aa19.08■□□□□ 0.65
SHANK2-220ENST00000608988 PRO1933Q9H354 126 aa19.08■□□□□ 0.65
SHANK2-220ENST00000608988 ASXL3Q9C0F0 2248 aa19.08■□□□□ 0.64
SHANK2-220ENST00000608988 A8MWP6 167 aa19.07■□□□□ 0.64
SHANK2-220ENST00000608988 NXPH3O95157 252 aa19.07■□□□□ 0.64
SHANK2-220ENST00000608988 GZMBP10144 247 aa19.07■□□□□ 0.64
SHANK2-220ENST00000608988 COX6A1P12074 109 aa19.07■□□□□ 0.64
SHANK2-220ENST00000608988 MLF1P58340 268 aa19.07■□□□□ 0.64
SHANK2-220ENST00000608988 CCL7P80098 99 aa19.07■□□□□ 0.64
SHANK2-220ENST00000608988 FGFBP3Q8TAT2 258 aa19.07■□□□□ 0.64
SHANK2-220ENST00000608988 ANAPC16Q96DE5 110 aa19.07■□□□□ 0.64
SHANK2-220ENST00000608988 SGCZQ96LD1 299 aa19.07■□□□□ 0.64
SHANK2-220ENST00000608988 NDUFAF3Q9BU61 184 aa19.07■□□□□ 0.64
SHANK2-220ENST00000608988 A0A1W2PQM1 296 aa19.07■□□□□ 0.64
SHANK2-220ENST00000608988 ATXN7O15265 892 aaPredicted RBP19.07■□□□□ 0.64
SHANK2-220ENST00000608988 ZNF737O75373 536 aa19.07■□□□□ 0.64
SHANK2-220ENST00000608988 COX5BP10606 129 aa19.07■□□□□ 0.64
SHANK2-220ENST00000608988 C16orf82Q7Z2V1 217 aa19.07■□□□□ 0.64
SHANK2-220ENST00000608988 LILRB2Q8N423 598 aa19.07■□□□□ 0.64
SHANK2-220ENST00000608988 OR56B2PQ8NGI1 322 aa19.07■□□□□ 0.64
SHANK2-220ENST00000608988 SSX3Q99909 188 aa19.07■□□□□ 0.64
SHANK2-220ENST00000608988 H3BP45 60 aa19.06■□□□□ 0.64
SHANK2-220ENST00000608988 CELA2AP08217 269 aa19.06■□□□□ 0.64
SHANK2-220ENST00000608988 METTL15P1P0C7V9 234 aa19.06■□□□□ 0.64
SHANK2-220ENST00000608988 RNF224P0DH78 156 aa19.06■□□□□ 0.64
SHANK2-220ENST00000608988 PSG2P11465 335 aa19.06■□□□□ 0.64
SHANK2-220ENST00000608988 MEF2BQ02080 365 aaPredicted RBP19.06■□□□□ 0.64
SHANK2-220ENST00000608988 COL10A1Q03692 680 aa19.06■□□□□ 0.64
SHANK2-220ENST00000608988 SSX2Q16385 188 aa19.06■□□□□ 0.64
SHANK2-220ENST00000608988 BSXQ3C1V8 233 aa19.06■□□□□ 0.64
SHANK2-220ENST00000608988 RPS19BP1Q86WX3 136 aaKnown RBP19.06■□□□□ 0.64
SHANK2-220ENST00000608988 OR5A2Q8NGI9 324 aa19.06■□□□□ 0.64
SHANK2-220ENST00000608988 TMEM170AQ8WVE7 144 aa19.06■□□□□ 0.64
SHANK2-220ENST00000608988 GPHA2Q96T91 129 aa19.06■□□□□ 0.64
SHANK2-220ENST00000608988 VSIRQ9H7M9 311 aa19.06■□□□□ 0.64
SHANK2-220ENST00000608988 CACNG5Q9UF02 275 aa19.06■□□□□ 0.64
SHANK2-220ENST00000608988 MRPS17Q9Y2R5 130 aaKnown RBP19.06■□□□□ 0.64
SHANK2-220ENST00000608988 SPAG17Q6Q759 2223 aa19.06■□□□□ 0.64
SHANK2-220ENST00000608988 CEP192Q8TEP8 1941 aa19.06■□□□□ 0.64
SHANK2-220ENST00000608988 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 PPP5D1E7EU14 171 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 H7BYZ3 331 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 TNFSF12O43508 249 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 SPCS3P61009 180 aa19.05■□□□□ 0.64
SHANK2-220ENST00000608988 IL11RAQ14626 422 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms