RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 SDCBPO00560 298 aaPredicted RBP11.6□□□□□ -0.55
CTSA-219ENST00000607841 GNB3P16520 340 aa11.6□□□□□ -0.55
CTSA-219ENST00000607841 GDNFP39905 211 aa11.6□□□□□ -0.55
CTSA-219ENST00000607841 MINOS1Q5TGZ0 78 aa11.6□□□□□ -0.55
CTSA-219ENST00000607841 Q6YL49 198 aa11.6□□□□□ -0.55
CTSA-219ENST00000607841 PRR18Q8N4B5 295 aa11.6□□□□□ -0.55
CTSA-219ENST00000607841 BEND2Q8NDZ0 799 aa11.6□□□□□ -0.55
CTSA-219ENST00000607841 OR5H6Q8NGV6 325 aa11.6□□□□□ -0.55
CTSA-219ENST00000607841 OR9G1Q8NH87 305 aa11.6□□□□□ -0.55
CTSA-219ENST00000607841 SETD6Q8TBK2 473 aa11.6□□□□□ -0.55
CTSA-219ENST00000607841 MALSU1Q96EH3 234 aa11.6□□□□□ -0.55
CTSA-219ENST00000607841 ZMAT3Q9HA38 289 aaKnown RBP11.6□□□□□ -0.55
CTSA-219ENST00000607841 DIABLOQ9NR28 239 aa11.6□□□□□ -0.55
CTSA-219ENST00000607841 MINOS1-NBL1R4GNA1 71 aa11.6□□□□□ -0.55
CTSA-219ENST00000607841 A0A075B6Q4 140 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 MDFIC2A0A1B0GVS7 189 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 TRIM77I1YAP6 450 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 MFNGO00587 321 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 HBZP02008 142 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 HTR1DP28221 377 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 SOX6P35712 828 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 TALDO1P37837 337 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 ARFRP1Q13795 201 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 CDNFQ49AH0 187 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 ZNF880Q6PDB4 577 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 LDLRAD3Q86YD5 345 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 TMEM86BQ8N661 226 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 NDNFQ8TB73 568 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 SSMEM1Q8WWF3 244 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 GALMQ96C23 342 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 S100A16Q96FQ6 103 aaKnown RBP11.59□□□□□ -0.55
CTSA-219ENST00000607841 DPAGT1Q9H3H5 408 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 ZNF286AQ9HBT8 521 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.59□□□□□ -0.55
CTSA-219ENST00000607841 GNG12Q9UBI6 72 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 KCNK7Q9Y2U2 307 aa11.59□□□□□ -0.55
CTSA-219ENST00000607841 FAM172BPA6NC97 362 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 BTBD17A6NE02 478 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 CLDN34H7C241 214 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 HOXA3O43365 443 aaPredicted RBP11.58□□□□□ -0.56
CTSA-219ENST00000607841 VENTXO95231 258 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 IGLV1-47P01700 117 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 MELTFP08582 738 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 GSTP1P09211 210 aaKnown RBP11.58□□□□□ -0.56
CTSA-219ENST00000607841 ZNF182P17025 639 aaPredicted RBP11.58□□□□□ -0.56
CTSA-219ENST00000607841 CEACAM3P40198 252 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 HTD2P86397 168 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 PITPNAQ00169 270 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 HMGN3Q15651 99 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 Q3ZCU0 254 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 UBE2NLQ5JXB2 153 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 MZT2AQ6P582 158 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 BAIAP2L2Q6UXY1 529 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 SAMD12Q8N8I0 201 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 OR1L1Q8NH94 360 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 ZFAND2BQ8WV99 257 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 SLC25A38Q96DW6 304 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 CYYR1Q96J86 154 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 CMTM3Q96MX0 182 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 HDHD3Q9BSH5 251 aaPredicted RBP11.58□□□□□ -0.56
CTSA-219ENST00000607841 MEGF9Q9H1U4 602 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 ABCG5Q9H222 651 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 Q9N2K0 584 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 OR2S2Q9NQN1 319 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 GFOD1Q9NXC2 390 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 ZNRD1Q9P1U0 126 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 DPM3Q9P2X0 92 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 AMMECR1Q9Y4X0 333 aaPredicted RBP11.58□□□□□ -0.56
CTSA-219ENST00000607841 POMT1Q9Y6A1 747 aa11.58□□□□□ -0.56
CTSA-219ENST00000607841 LEUTXA8MZ59 168 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 J3QR06 171 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 RGS11O94810 467 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 ARHGDIBP52566 201 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 LOXL3P58215 753 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 AANATQ16613 207 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 PNLIPRP3Q17RR3 467 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 HLA-DRB5Q30154 266 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 HACD4Q5VWC8 232 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 STEAP3Q658P3 488 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 OLFML2AQ68BL7 652 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 LHFPL4Q7Z7J7 247 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 ZDHHC22Q8N966 263 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 C8orf31Q8N9H6 132 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 OR4P4Q8NGL7 312 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 UBALD1Q8TB05 177 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 MMP28Q9H239 520 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 COMMD3Q9UBI1 195 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 JPT1Q9UK76 154 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 PSG11Q9UQ72 335 aa11.57□□□□□ -0.56
CTSA-219ENST00000607841 JMJD1CQ15652 2540 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 TRAV18A0A075B6X5 111 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 CCDC160A6NGH7 325 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 DNAJC9-AS1A6NH13 148 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 BUB1B-PAK6H3BSN5 160 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 MNDAP41218 407 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 KIR2DS4P43632 304 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 IER3P46695 156 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 GNG10P50151 68 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 GNG2P59768 71 aa11.56□□□□□ -0.56
CTSA-219ENST00000607841 UBA52P62987 128 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms