RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 RPS16P62249 146 aaKnown RBP13.42□□□□□ -0.26
CTSA-214ENST00000606788 CMTM1Q8IZ96 169 aa13.42□□□□□ -0.26
CTSA-214ENST00000606788 SELENOHQ8IZQ5 122 aaKnown RBP13.42□□□□□ -0.26
CTSA-214ENST00000606788 OR8G5Q8NG78 346 aa13.42□□□□□ -0.26
CTSA-214ENST00000606788 SPACA1Q9HBV2 294 aa13.42□□□□□ -0.26
CTSA-214ENST00000606788 POLDIP2Q9Y2S7 368 aa13.42□□□□□ -0.26
CTSA-214ENST00000606788 COX5AP20674 150 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 ZP3P21754 424 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 SSTR5P35346 364 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 GLIPR1P48060 266 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 FAM180AQ6UWF9 173 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 ZCCHC24Q8N2G6 241 aaKnown RBP13.41□□□□□ -0.26
CTSA-214ENST00000606788 DEFB108BQ8NET1 73 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 PKIBQ9C010 78 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 TP53TG5Q9Y2B4 290 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 TUBAL3A6NHL2 446 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 OR5H1A6NKK0 313 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 IQCF6A8MYZ5 107 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 ATP6V1G2-DDX39BF2Z307 99 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 SH2D1BO14796 132 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 ZNF616Q08AN1 781 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 PLK3Q9H4B4 646 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 PLSCR4Q9NRQ2 329 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 OR2W1Q9Y3N9 320 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 FAM90A10PA6NDY2 464 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 FAM90A18PA6NE21 464 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 FAM90A16PA6NEW6 464 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 FAM90A20PA6NIJ5 464 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 FAM90A8PA6NJQ4 464 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 FAM90A7PA6NKC0 464 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 FAM90A22PA8MWA6 464 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 FAM90A12PA8MX19 464 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 FAM90A5PA8MXJ8 464 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 FAM90A23PA8MXZ1 464 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 AHRRA9YTQ3 701 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 H7C1Q1 480 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 SNAPC5O75971 98 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 SERPINE2P07093 398 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 FAM90A15PP0C7V4 464 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 FAM90A13PP0C7W8 464 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 FAM90A14PP0C7W9 464 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 FAM90A24PP0C7X0 464 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 SELLP14151 372 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 NKX2-1P43699 371 aaPredicted RBP13.41□□□□□ -0.26
CTSA-214ENST00000606788 ZNF718Q3SXZ3 478 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 ZNF324BQ6AW86 544 aaPredicted RBP13.41□□□□□ -0.26
CTSA-214ENST00000606788 C11orf53Q8IXP5 236 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 LRRC29Q8WV35 223 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 FAM234AQ9H0X4 552 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 TUBD1Q9UJT1 453 aa13.41□□□□□ -0.26
CTSA-214ENST00000606788 WRBO00258 174 aa13.4□□□□□ -0.26
CTSA-214ENST00000606788 EIF3GO75821 320 aaKnown RBP eCLIP13.4□□□□□ -0.26
CTSA-214ENST00000606788 PPP1CCP36873 323 aaKnown RBP13.4□□□□□ -0.26
CTSA-214ENST00000606788 RNF141Q8WVD5 230 aa13.4□□□□□ -0.26
CTSA-214ENST00000606788 SLX1AQ9BQ83 275 aa13.4□□□□□ -0.26
CTSA-214ENST00000606788 DNTTIP1Q9H147 329 aa13.4□□□□□ -0.26
CTSA-214ENST00000606788 ARFGEF3Q5TH69 2177 aa13.4□□□□□ -0.26
CTSA-214ENST00000606788 IAPPP10997 89 aa13.4□□□□□ -0.26
CTSA-214ENST00000606788 KCNJ3P48549 501 aa13.4□□□□□ -0.26
CTSA-214ENST00000606788 WDR82Q6UXN9 313 aa13.4□□□□□ -0.26
CTSA-214ENST00000606788 DMBX1Q8NFW5 382 aa13.4□□□□□ -0.26
CTSA-214ENST00000606788 MARC2Q969Z3 335 aa13.4□□□□□ -0.26
CTSA-214ENST00000606788 SCNM1Q9BWG6 230 aa13.4□□□□□ -0.26
CTSA-214ENST00000606788 MED13LQ71F56 2210 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 ABCD4O14678 606 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 CGAP01215 116 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 FAM157CP0CG43 387 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 EGR1P18146 543 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 TGIF2LYQ8IUE0 185 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 TAAR3PQ9P1P4 343 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 E5RGE8 158 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 CEACAM4O75871 244 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 PLA2G5P39877 138 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 UCP3P55916 312 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 ERVK11-1P61568 191 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 NAAAQ02083 359 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 COL10A1Q03692 680 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 TESK1Q15569 626 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 FAM76BQ5HYJ3 339 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 TMEM88Q6PEY1 159 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 Q6ZRG5 221 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 Q6ZS92 163 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 LRRC46Q96FV0 321 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 PLSCR2Q9NRY7 297 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 NSG2Q9Y328 171 aa13.39□□□□□ -0.27
CTSA-214ENST00000606788 TMEM50AO95807 157 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 PRH1P02810 166 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 IL2RGP31785 369 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 IL13RA2Q14627 380 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 Q6ZRM9 215 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 HSD17B13Q7Z5P4 300 aaPredicted RBP13.38□□□□□ -0.27
CTSA-214ENST00000606788 OR4A4PQ8NGN8 299 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 DHRS9Q9BPW9 319 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 LYL1P12980 280 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 ZNF816Q0VGE8 651 aaPredicted RBP13.38□□□□□ -0.27
CTSA-214ENST00000606788 RTP5Q14D33 572 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 GUCA2BQ16661 112 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 ZNF497Q6ZNH5 498 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 STOML3Q8TAV4 291 aa13.38□□□□□ -0.27
CTSA-214ENST00000606788 ABHD14BQ96IU4 210 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms