RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 RCL1Q9Y2P8 373 aaKnown RBP3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 TBL2Q9Y4P3 447 aaKnown RBP3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 TIMM9Q9Y5J7 89 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 TRAPPC1Q9Y5R8 145 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 PCNX3Q9H6A9 2034 aa3.48□□□□□ -1.85
HMGB1P50-201ENST00000605814 SNRNP200O75643 2136 aaKnown RBP3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 GOLGA4Q13439 2230 aaKnown RBP3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 LOC102725191A0A1B0GVB3 256 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 LOC107986453A0A1B0GWG9 222 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 A0A1W2PRS3 328 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 IGSF23A1L1A6 192 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 PRSS37A4D1T9 235 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 FAM24AA6NFZ4 105 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 GJE1A6NN92 205 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZNF814B7Z6K7 855 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 C4orf51C9J302 202 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 G3V4G9 280 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 SIRPB1O00241 398 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 TNFSF14O43557 240 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 CD5LO43866 347 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 NUPR1O60356 82 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 NPIPB7O75200 414 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZNF253O75346 499 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 RAD51DO75771 328 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 DDAH2O95865 285 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 MT-ATP6P00846 226 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 NRASP01111 189 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 KRASP01116 189 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 HLA-HP01893 362 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 SMIM17P0DL12 118 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZNF10P21506 573 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 CCL1P22362 96 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 CTSSP25774 331 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 CD40P25942 277 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 TSPOP30536 169 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 NTSR1P30989 418 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 CD70P32970 193 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZNF93P35789 620 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 PLA2G5P39877 138 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 EMDP50402 254 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 LHX2P50458 406 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 RAB28P51157 221 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 FGF8P55075 233 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 RPL27P61353 136 aaKnown RBP3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 NTHL1P78549 312 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 PAX2Q02962 417 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 RPL18Q07020 188 aaKnown RBP3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZP4Q12836 540 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 MRPL49Q13405 166 aaKnown RBP3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 ARFRP1Q13795 201 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 BEAN1Q3B7T3 259 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 SNAI3Q3KNW1 292 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 TMEM52BQ4KMG9 183 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 PRR27Q6MZM9 219 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 DNM1P34Q6PK57 102 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 Q6ZS49 121 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 LYZL2Q7Z4W2 148 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 CALHM1Q8IU99 346 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 ODF3L1Q8IXM7 274 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 OR5AS1Q8N127 324 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 MUC15Q8N387 334 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 TMEM217Q8N7C4 229 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 CCDC71LQ8N9Z2 235 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 OR4N2Q8NGD1 307 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 OR5D18Q8NGL1 313 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 FAM216AQ8WUB2 273 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 TMEM171Q8WVE6 324 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 RNF133Q8WVZ7 376 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 RTN4IP1Q8WWV3 396 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 TOMM40LQ969M1 308 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 APH1AQ96BI3 265 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 C10orf35Q96D05 121 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 PGAM5Q96HS1 289 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 SGCZQ96LD1 299 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 TSSK2Q96PF2 358 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 TSPAN32Q96QS1 320 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 ATP5SQ99766 215 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 SMIM7Q9BQ49 75 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 MACROD1Q9BQ69 325 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 TMEM59Q9BXS4 323 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 PECRQ9BY49 303 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 MTIF3Q9H2K0 278 aaKnown RBP3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 TXNIPQ9H3M7 391 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 BANF2Q9H503 90 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 C6orf106Q9H6K1 298 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 ZDHHC6Q9H6R6 413 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 MOB1AQ9H8S9 216 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 RPRMQ9NS64 109 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 C1RLQ9NZP8 487 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 LRIT1Q9P2V4 623 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 TP53TG3Q9ULZ0 132 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 DAPP1Q9UN19 280 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 VDAC3Q9Y277 283 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 MRPS28Q9Y2Q9 187 aaKnown RBP3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 LRP12Q9Y561 859 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 OR1A2Q9Y585 309 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 INSL5Q9Y5Q6 135 aa3.47□□□□□ -1.85
HMGB1P50-201ENST00000605814 RALGAPA1Q6GYQ0 2036 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms