RNA–Protein interactions for RNA: ENST00000603963.1

SRSF9-206, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 5

Gene SRSF9, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-206ENST00000603963 LINC00311Q8N616 119 aa17.27■□□□□ 0.36
SRSF9-206ENST00000603963 NKAIN3Q8N8D7 197 aa17.27■□□□□ 0.36
SRSF9-206ENST00000603963 C8orf31Q8N9H6 132 aa17.27■□□□□ 0.36
SRSF9-206ENST00000603963 BANF2Q9H503 90 aa17.27■□□□□ 0.36
SRSF9-206ENST00000603963 NECAP2Q9NVZ3 263 aa17.27■□□□□ 0.36
SRSF9-206ENST00000603963 PIN1P1O15428 100 aa17.26■□□□□ 0.35
SRSF9-206ENST00000603963 MGMTP16455 207 aa17.26■□□□□ 0.35
SRSF9-206ENST00000603963 LOXL3P58215 753 aa17.26■□□□□ 0.35
SRSF9-206ENST00000603963 Q3ZCU0 254 aa17.26■□□□□ 0.35
SRSF9-206ENST00000603963 OR4K15Q8NH41 348 aa17.26■□□□□ 0.35
SRSF9-206ENST00000603963 PHF21AQ96BD5 680 aa17.26■□□□□ 0.35
SRSF9-206ENST00000603963 UQCC2Q9BRT2 126 aa17.26■□□□□ 0.35
SRSF9-206ENST00000603963 GNG12Q9UBI6 72 aa17.26■□□□□ 0.35
SRSF9-206ENST00000603963 FAM90A10PA6NDY2 464 aa17.25■□□□□ 0.35
SRSF9-206ENST00000603963 FAM90A7PA6NKC0 464 aa17.25■□□□□ 0.35
SRSF9-206ENST00000603963 SERPINE3A8MV23 424 aa17.25■□□□□ 0.35
SRSF9-206ENST00000603963 FAM90A23PA8MXZ1 464 aa17.25■□□□□ 0.35
SRSF9-206ENST00000603963 CA11O75493 328 aa17.25■□□□□ 0.35
SRSF9-206ENST00000603963 TMEM30BQ3MIR4 351 aa17.25■□□□□ 0.35
SRSF9-206ENST00000603963 TRAT1Q6PIZ9 186 aa17.25■□□□□ 0.35
SRSF9-206ENST00000603963 CHPT1Q8WUD6 406 aa17.25■□□□□ 0.35
SRSF9-206ENST00000603963 FKBP14Q9NWM8 211 aa17.25■□□□□ 0.35
SRSF9-206ENST00000603963 NOTCH3Q9UM47 2321 aa17.24■□□□□ 0.35
SRSF9-206ENST00000603963 IGHV3-72A0A0B4J1Y9 119 aa17.24■□□□□ 0.35
SRSF9-206ENST00000603963 NCBP2LA6PVI3 153 aaKnown RBP17.24■□□□□ 0.35
SRSF9-206ENST00000603963 C12orf77C9JDV5 145 aa17.24■□□□□ 0.35
SRSF9-206ENST00000603963 GLAP06280 429 aa17.24■□□□□ 0.35
SRSF9-206ENST00000603963 IGLL1P15814 213 aa17.24■□□□□ 0.35
SRSF9-206ENST00000603963 FUT3P21217 361 aa17.24■□□□□ 0.35
SRSF9-206ENST00000603963 EBI3Q14213 229 aa17.24■□□□□ 0.35
SRSF9-206ENST00000603963 FAM53AQ6NSI3 398 aaPredicted RBP17.24■□□□□ 0.35
SRSF9-206ENST00000603963 SLC35E3Q7Z769 313 aa17.24■□□□□ 0.35
SRSF9-206ENST00000603963 ZNF329Q86UD4 541 aa17.24■□□□□ 0.35
SRSF9-206ENST00000603963 LYPD6Q86Y78 171 aa17.24■□□□□ 0.35
SRSF9-206ENST00000603963 PRR18Q8N4B5 295 aa17.24■□□□□ 0.35
SRSF9-206ENST00000603963 TMEM104Q8NE00 496 aa17.24■□□□□ 0.35
SRSF9-206ENST00000603963 OR2T10Q8NGZ9 312 aa17.24■□□□□ 0.35
SRSF9-206ENST00000603963 TFAP2CQ92754 450 aa17.24■□□□□ 0.35
SRSF9-206ENST00000603963 EAF1Q96JC9 268 aaPredicted RBP17.24■□□□□ 0.35
SRSF9-206ENST00000603963 MND1Q9BWT6 205 aa17.24■□□□□ 0.35
SRSF9-206ENST00000603963 GHRLQ9UBU3 117 aa17.24■□□□□ 0.35
SRSF9-206ENST00000603963 HBZP02008 142 aa17.23■□□□□ 0.35
SRSF9-206ENST00000603963 CDK1P06493 297 aa17.23■□□□□ 0.35
SRSF9-206ENST00000603963 SLC35A2P78381 396 aa17.23■□□□□ 0.35
SRSF9-206ENST00000603963 SLC35B1P78383 322 aa17.23■□□□□ 0.35
SRSF9-206ENST00000603963 GPR50Q13585 617 aa17.23■□□□□ 0.35
SRSF9-206ENST00000603963 ACSM3Q53FZ2 586 aa17.23■□□□□ 0.35
SRSF9-206ENST00000603963 Q6ZPA2 131 aa17.23■□□□□ 0.35
SRSF9-206ENST00000603963 FOXRED2Q8IWF2 684 aa17.23■□□□□ 0.35
SRSF9-206ENST00000603963 IZUMO1Q8IYV9 350 aa17.23■□□□□ 0.35
SRSF9-206ENST00000603963 MS4A15Q8N5U1 240 aa17.23■□□□□ 0.35
SRSF9-206ENST00000603963 MRAPQ8TCY5 172 aa17.23■□□□□ 0.35
SRSF9-206ENST00000603963 RTN4IP1Q8WWV3 396 aaPredicted RBP17.23■□□□□ 0.35
SRSF9-206ENST00000603963 ST6GALNAC6Q969X2 333 aa17.23■□□□□ 0.35
SRSF9-206ENST00000603963 Q96M66 194 aa17.23■□□□□ 0.35
SRSF9-206ENST00000603963 NOL4LQ96MY1 436 aaPredicted RBP17.23■□□□□ 0.35
SRSF9-206ENST00000603963 CST11Q9H112 138 aa17.23■□□□□ 0.35
SRSF9-206ENST00000603963 UBE2QL1A1L167 161 aa17.22■□□□□ 0.35
SRSF9-206ENST00000603963 PTGES3LE9PB15 166 aa17.22■□□□□ 0.35
SRSF9-206ENST00000603963 IGHG2P01859 326 aa17.22■□□□□ 0.35
SRSF9-206ENST00000603963 VHLP40337 213 aa17.22■□□□□ 0.35
SRSF9-206ENST00000603963 GABPB1Q06547 395 aaPredicted RBP17.22■□□□□ 0.35
SRSF9-206ENST00000603963 FOXB2Q5VYV0 432 aa17.22■□□□□ 0.35
SRSF9-206ENST00000603963 RNLSQ5VYX0 342 aa17.22■□□□□ 0.35
SRSF9-206ENST00000603963 SLC25A48Q6ZT89 311 aaKnown RBP17.22■□□□□ 0.35
SRSF9-206ENST00000603963 TGIF2LXQ8IUE1 241 aa17.22■□□□□ 0.35
SRSF9-206ENST00000603963 GAPTQ8N292 157 aa17.22■□□□□ 0.35
SRSF9-206ENST00000603963 OR10V1Q8NGI7 309 aa17.22■□□□□ 0.35
SRSF9-206ENST00000603963 FAM46BQ96A09 425 aa17.22■□□□□ 0.35
SRSF9-206ENST00000603963 DCLRE1BQ9H816 532 aa17.22■□□□□ 0.35
SRSF9-206ENST00000603963 SCN3BQ9NY72 215 aa17.22■□□□□ 0.35
SRSF9-206ENST00000603963 KCNIP1Q9NZI2 227 aa17.22■□□□□ 0.35
SRSF9-206ENST00000603963 ANKRD65E5RJM6 399 aa17.21■□□□□ 0.35
SRSF9-206ENST00000603963 H0YHG0 523 aa17.21■□□□□ 0.35
SRSF9-206ENST00000603963 TXNL1O43396 289 aa17.21■□□□□ 0.35
SRSF9-206ENST00000603963 SC5DO75845 299 aa17.21■□□□□ 0.35
SRSF9-206ENST00000603963 RCC1P18754 421 aaPredicted RBP17.21■□□□□ 0.35
SRSF9-206ENST00000603963 CD1BP29016 333 aa17.21■□□□□ 0.35
SRSF9-206ENST00000603963 C6orf141Q5SZD1 244 aa17.21■□□□□ 0.35
SRSF9-206ENST00000603963 UNQ9370/PRO34162Q6UXP9 181 aa17.21■□□□□ 0.35
SRSF9-206ENST00000603963 OR51D1Q8NGF3 324 aa17.21■□□□□ 0.35
SRSF9-206ENST00000603963 OR1L1Q8NH94 360 aa17.21■□□□□ 0.35
SRSF9-206ENST00000603963 RCC1LQ96I51 464 aaKnown RBP17.21■□□□□ 0.35
SRSF9-206ENST00000603963 TMED9Q9BVK6 235 aa17.21■□□□□ 0.35
SRSF9-206ENST00000603963 TAF9BQ9HBM6 251 aa17.21■□□□□ 0.35
SRSF9-206ENST00000603963 AURKAIP1Q9NWT8 199 aaPredicted RBP17.21■□□□□ 0.35
SRSF9-206ENST00000603963 LINC00527Q9UJ94 153 aa17.21■□□□□ 0.35
SRSF9-206ENST00000603963 SLC31A2O15432 143 aa17.2■□□□□ 0.34
SRSF9-206ENST00000603963 PDCD6O75340 191 aa17.2■□□□□ 0.34
SRSF9-206ENST00000603963 MOSP00540 346 aa17.2■□□□□ 0.34
SRSF9-206ENST00000603963 UBBP0CG47 229 aa17.2■□□□□ 0.34
SRSF9-206ENST00000603963 INSL4Q14641 139 aa17.2■□□□□ 0.34
SRSF9-206ENST00000603963 CT45A1Q5HYN5 189 aa17.2■□□□□ 0.34
SRSF9-206ENST00000603963 GLT8D1Q68CQ7 371 aa17.2■□□□□ 0.34
SRSF9-206ENST00000603963 SIGIRRQ6IA17 410 aa17.2■□□□□ 0.34
SRSF9-206ENST00000603963 COMMD1Q8N668 190 aa17.2■□□□□ 0.34
SRSF9-206ENST00000603963 ZNF439Q8NDP4 499 aa17.2■□□□□ 0.34
SRSF9-206ENST00000603963 CT45A3Q8NHU0 189 aa17.2■□□□□ 0.34
SRSF9-206ENST00000603963 OR2S2Q9NQN1 319 aa17.2■□□□□ 0.34
SRSF9-206ENST00000603963 ZFP57Q9NU63 452 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms