RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 PRRX1P54821 245 aa11.28□□□□□ -0.6
RNF40-212ENST00000602784 KRTAP21-3Q3LHN1 58 aa11.28□□□□□ -0.6
RNF40-212ENST00000602784 MINOS1Q5TGZ0 78 aa11.28□□□□□ -0.6
RNF40-212ENST00000602784 Q6YL49 198 aa11.28□□□□□ -0.6
RNF40-212ENST00000602784 LDLRAD3Q86YD5 345 aa11.28□□□□□ -0.6
RNF40-212ENST00000602784 C8orf31Q8N9H6 132 aa11.28□□□□□ -0.6
RNF40-212ENST00000602784 NDNFQ8TB73 568 aa11.28□□□□□ -0.6
RNF40-212ENST00000602784 ZNF596Q8TC21 504 aa11.28□□□□□ -0.6
RNF40-212ENST00000602784 ZDHHC16Q969W1 377 aa11.28□□□□□ -0.6
RNF40-212ENST00000602784 CREB3L1Q96BA8 519 aa11.28□□□□□ -0.6
RNF40-212ENST00000602784 PHF21AQ96BD5 680 aa11.28□□□□□ -0.6
RNF40-212ENST00000602784 MALSU1Q96EH3 234 aa11.28□□□□□ -0.6
RNF40-212ENST00000602784 CMTM3Q96MX0 182 aa11.28□□□□□ -0.6
RNF40-212ENST00000602784 CMSS1Q9BQ75 279 aaKnown RBP11.28□□□□□ -0.6
RNF40-212ENST00000602784 TAF9BQ9HBM6 251 aa11.28□□□□□ -0.6
RNF40-212ENST00000602784 CHMP1AQ9HD42 196 aaPredicted RBP11.28□□□□□ -0.6
RNF40-212ENST00000602784 MINOS1-NBL1R4GNA1 71 aa11.28□□□□□ -0.6
RNF40-212ENST00000602784 A0A1W2PRD5 423 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 A0A1W2PRF3 423 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 A0A1W2PRM7 423 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 NOL3O60936 208 aaKnown RBP11.27□□□□□ -0.61
RNF40-212ENST00000602784 HBZP02008 142 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 CD3GP09693 182 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 GNB3P16520 340 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 ZNF182P17025 639 aaPredicted RBP11.27□□□□□ -0.61
RNF40-212ENST00000602784 NFYBP25208 207 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 LOXL3P58215 753 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 MRPS15P82914 257 aaKnown RBP11.27□□□□□ -0.61
RNF40-212ENST00000602784 HTD2P86397 168 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 PITPNAQ00169 270 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 HMGN3Q15651 99 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 AANATQ16613 207 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 CDNFQ49AH0 187 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 UBE2NLQ5JXB2 153 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 OLFML2AQ68BL7 652 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 BAIAP2L2Q6UXY1 529 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 TMEM86BQ8N661 226 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 OR9G1Q8NH87 305 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 ZFAND2BQ8WV99 257 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 AP3S1Q92572 193 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 GALMQ96C23 342 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 S100A16Q96FQ6 103 aaKnown RBP11.27□□□□□ -0.61
RNF40-212ENST00000602784 MEGF9Q9H1U4 602 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 ZMAT3Q9HA38 289 aaKnown RBP11.27□□□□□ -0.61
RNF40-212ENST00000602784 ZNF286AQ9HBT8 521 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 DIABLOQ9NR28 239 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 GFOD1Q9NXC2 390 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 POMT1Q9Y6A1 747 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 CEPT1Q9Y6K0 416 aa11.27□□□□□ -0.61
RNF40-212ENST00000602784 SDCBPO00560 298 aaPredicted RBP11.26□□□□□ -0.61
RNF40-212ENST00000602784 TOR1AO14656 332 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 VENTXO95231 258 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 HTR1DP28221 377 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 BAMBIQ13145 260 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 SPCS2Q15005 226 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 SRSF7Q16629 238 aaKnown RBP eCLIP11.26□□□□□ -0.61
RNF40-212ENST00000602784 PNLIPRP3Q17RR3 467 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 HACD4Q5VWC8 232 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 STEAP3Q658P3 488 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 MZT2AQ6P582 158 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 Q6ZPA2 131 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 SAMD12Q8N8I0 201 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 ZDHHC22Q8N966 263 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 OR4P4Q8NGL7 312 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 OR1L1Q8NH94 360 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 SSMEM1Q8WWF3 244 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 ISOC1Q96CN7 298 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 HDHD3Q9BSH5 251 aaPredicted RBP11.26□□□□□ -0.61
RNF40-212ENST00000602784 Q9N2K0 584 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 ESM1Q9NQ30 184 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 DPM3Q9P2X0 92 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 PSG11Q9UQ72 335 aa11.26□□□□□ -0.61
RNF40-212ENST00000602784 A0A075B6Q4 140 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 MDFIC2A0A1B0GVS7 189 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 VGLL3A8MV65 326 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 H3BMQ9 156 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 J3QR06 171 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 ZNF701M0R085 212 aaPredicted RBP11.25□□□□□ -0.61
RNF40-212ENST00000602784 XRCC3O43542 346 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 APOA1P02647 267 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 MELTFP08582 738 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 DTYMKP23919 212 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 SOX6P35712 828 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 CEACAM3P40198 252 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 IER3P46695 156 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 ARFRP1Q13795 201 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 HLA-DRB5Q30154 266 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 ZNF260Q3ZCT1 412 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 LY6G6FQ5SQ64 297 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 UTF1Q5T230 341 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 Q6ZS49 121 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 LINC00311Q8N616 119 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 MMP28Q9H239 520 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 DPAGT1Q9H3H5 408 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 OR2S2Q9NQN1 319 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 ZNRD1Q9P1U0 126 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 JPT1Q9UK76 154 aa11.25□□□□□ -0.61
RNF40-212ENST00000602784 CUBNO60494 3623 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 TRAV18A0A075B6X5 111 aa11.24□□□□□ -0.61
RNF40-212ENST00000602784 DNAJC9-AS1A6NH13 148 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 303.3 ms