RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 FAHD2BQ6P2I3 314 aaPredicted RBP8.38□□□□□ -1.07
UPF1-213ENST00000601981 Q6P435 159 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 ZNF561Q8N587 486 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 DRAXINQ8NBI3 349 aaPredicted RBP8.38□□□□□ -1.07
UPF1-213ENST00000601981 SUMF2Q8NBJ7 301 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 TERB2Q8NHR7 220 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 PPP1R35Q8TAP8 253 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 MAFIPQ8WZ33 124 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 DYRK2Q92630 601 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 MRGPRFQ96AM1 343 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 FAHD2AQ96GK7 314 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 SCGB3A2Q96PL1 93 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 SEC22CQ9BRL7 303 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 RANGRFQ9HD47 186 aaPredicted RBP8.38□□□□□ -1.07
UPF1-213ENST00000601981 NECAP2Q9NVZ3 263 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 EHFQ9NZC4 300 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 KCNS2Q9ULS6 477 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 VSIG4Q9Y279 399 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 DNHD1Q96M86 4753 aa8.38□□□□□ -1.07
UPF1-213ENST00000601981 IGKV1D-8A0A087WSZ0 117 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 TRAV24A0A0B4J272 114 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 TRAV20A0A0B4J274 112 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 RFPL4AA6NLU0 287 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 A8MV72 311 aaPredicted RBP8.37□□□□□ -1.07
UPF1-213ENST00000601981 A8MXK9 166 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 RFPL4AL1F8VTS6 287 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 SH2D1BO14796 132 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 DEGS1O15121 323 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 SIGLEC5O15389 551 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 TGFAP01135 160 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 WNT2P09544 360 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 PSG2P11465 335 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 ZNF16P17020 682 aaPredicted RBP8.37□□□□□ -1.07
UPF1-213ENST00000601981 GATA3P23771 443 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 IL2RGP31785 369 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 TAS2R31P59538 309 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 UBE2MP61081 183 aaKnown RBP8.37□□□□□ -1.07
UPF1-213ENST00000601981 TSPAN5P62079 268 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 SURF2Q15527 256 aaPredicted RBP8.37□□□□□ -1.07
UPF1-213ENST00000601981 KRTAP21-3Q3LHN1 58 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 ZFP69Q49AA0 526 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 BRICD5Q6PL45 260 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 CLEC9AQ6UXN8 241 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 ZNF788Q6ZQV5 615 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 SLC25A42Q86VD7 318 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 TMEM185AQ8NFB2 350 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 OR11H7Q8NGC8 314 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 OR5T2Q8NGG2 359 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 ANGPTL6Q8NI99 470 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 ZNF431Q8TF32 576 aaPredicted RBP8.37□□□□□ -1.07
UPF1-213ENST00000601981 C1orf159Q96HA4 380 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 CCL13Q99616 98 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 DPCDQ9BVM2 203 aaPredicted RBP8.37□□□□□ -1.07
UPF1-213ENST00000601981 CHMP1AQ9HD42 196 aaPredicted RBP8.37□□□□□ -1.07
UPF1-213ENST00000601981 ZNF69Q9UC07 566 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 CSPG4Q6UVK1 2322 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 TLN2Q9Y4G6 2542 aa8.37□□□□□ -1.07
UPF1-213ENST00000601981 ARHGAP32A7KAX9 2087 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 ZNF469Q96JG9 3925 aaPredicted RBP8.36□□□□□ -1.07
UPF1-213ENST00000601981 IGKV1D-17A0A075B6S4 117 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 MEIKINA0A087WXM9 373 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 PPIAL4CA0A0B4J2A2 164 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 KIR2DS1A0A191URI9 304 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 FAM157AC9JC47 383 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 DVL1O14640 695 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 HAND1O96004 215 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 OR4E1P0C645 316 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 ANXA3P12429 323 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 ZNF44P15621 663 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 DUSP1P28562 367 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 PRDX2P32119 198 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 RBMXP38159 391 aaKnown RBP8.36□□□□□ -1.07
UPF1-213ENST00000601981 KIR2DS4P43632 304 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 DVL1P1P54792 670 aaPredicted RBP8.36□□□□□ -1.07
UPF1-213ENST00000601981 LCN2P80188 198 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 HOXA4Q00056 320 aaPredicted RBP8.36□□□□□ -1.07
UPF1-213ENST00000601981 KIR2DS1Q14954 304 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 C4orf46Q504U0 113 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 AADACL3Q5VUY0 350 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 WDR25Q64LD2 544 aaPredicted RBP8.36□□□□□ -1.07
UPF1-213ENST00000601981 ZNF880Q6PDB4 577 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 LYPD2Q6UXB3 125 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 BTNL3Q6UXE8 466 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 MOB1BQ7L9L4 216 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 TMED4Q7Z7H5 227 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 TEX29Q8N6K0 151 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 FAM216BQ8N7L0 139 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 ASCC1Q8N9N2 400 aaKnown RBP8.36□□□□□ -1.07
UPF1-213ENST00000601981 NEK7Q8TDX7 302 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 TMEM186Q96B77 213 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 MSI2Q96DH6 328 aaKnown RBP8.36□□□□□ -1.07
UPF1-213ENST00000601981 SDSLQ96GA7 329 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 GAFA1Q96PS6 74 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 FYTTD1Q96QD9 318 aaKnown RBP8.36□□□□□ -1.07
UPF1-213ENST00000601981 FAM234AQ9H0X4 552 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 SEBOXQ9HB31 216 aaPredicted RBP8.36□□□□□ -1.07
UPF1-213ENST00000601981 LPAR2Q9HBW0 351 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 Q9N2K0 584 aa8.36□□□□□ -1.07
UPF1-213ENST00000601981 SLC25A10Q9UBX3 287 aaPredicted RBP8.36□□□□□ -1.07
UPF1-213ENST00000601981 GPR132Q9UNW8 380 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 134.8 ms