RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 ASXL3Q9C0F0 2248 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 A0A1W2PR77 199 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 SPRY1O43609 319 aaPredicted RBP9.08□□□□□ -0.96
LIG1-220ENST00000601091 CXCL13O43927 109 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 WDR1O75083 606 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 IGLV3-19P01714 112 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 SRSF3P84103 164 aaKnown RBP9.08□□□□□ -0.96
LIG1-220ENST00000601091 PLPPR5Q32ZL2 321 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 DCAF12Q5T6F0 453 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 RTN4RQ9BZR6 473 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 FAM206AQ9NX38 181 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 SLC2A8Q9NY64 477 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 TUBD1Q9UJT1 453 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 DENND4CQ5VZ89 1909 aa9.08□□□□□ -0.96
LIG1-220ENST00000601091 CER1O95813 267 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 CD8AP01732 235 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 MPGP29372 298 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 CYB561P49447 251 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 SP6Q3SY56 376 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 VAX1Q5SQQ9 334 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 CALHM1Q8IU99 346 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 OSR2Q8N2R0 312 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 SUMF1Q8NBK3 374 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 IL1F10Q8WWZ1 152 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 FAM110AQ9BQ89 295 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 PECRQ9BY49 303 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 FREM3P0C091 2139 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 NPIPB13A6NJU9 1138 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 NPIPB4C9JG80 1138 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 IGHV3-9P01782 118 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 NKX2-1P43699 371 aaPredicted RBP9.07□□□□□ -0.96
LIG1-220ENST00000601091 FBXL14Q8N1E6 418 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 MTURNQ8N3F0 131 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 NHLRC2Q8NBF2 726 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 MS4A5Q9H3V2 200 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 PILRBQ9UKJ0 227 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 ABCA7Q8IZY2 2146 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 HSPB6O14558 160 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 GPR137BO60478 399 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 TOX4O94842 621 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 FAM87AP0C7U9 286 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 SNAI3Q3KNW1 292 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 C5orf47Q569G3 176 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 COLCA1Q6ZS62 124 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 HOGA1Q86XE5 327 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 OR2M3Q8NG83 312 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 OR1F12Q8NHA8 337 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 PITPNC1Q9UKF7 332 aa9.07□□□□□ -0.96
LIG1-220ENST00000601091 OR6C6A6NF89 314 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 UCP2P55851 309 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 CLDN18P56856 261 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 RPL7L1Q6DKI1 246 aaKnown RBP9.06□□□□□ -0.96
LIG1-220ENST00000601091 LFNGQ8NES3 379 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 OR2AE1Q8NHA4 323 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 ADGRG7Q96K78 797 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 RALYQ9UKM9 306 aaKnown RBP9.06□□□□□ -0.96
LIG1-220ENST00000601091 GPR132Q9UNW8 380 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 CCDC187A0A096LP49 1063 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 A0A1W2PP11 408 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 XRCC2O43543 280 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 NPIPB7O75200 414 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 CD37P11049 281 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 AZU1P20160 251 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 IL11RAQ14626 422 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 ZNF709Q8N972 641 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 EAF1Q96JC9 268 aaPredicted RBP9.06□□□□□ -0.96
LIG1-220ENST00000601091 SIGMAR1Q99720 223 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 ENY2Q9NPA8 101 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 UQCC1Q9NVA1 299 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 MSRB2Q9Y3D2 182 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 KIR2DS1A0A191URI9 304 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 CD300LBA8K4G0 201 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 GDF9O60383 454 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 IGFBP3P17936 291 aaPredicted RBP9.06□□□□□ -0.96
LIG1-220ENST00000601091 KIR2DS4P43632 304 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 FUT6P51993 359 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 TMPRSS3P57727 454 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 KIR2DS1Q14954 304 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 RAB35Q15286 201 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 HLA-BQ31612 363 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 SLC25A26Q70HW3 274 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 KCNIP1Q9NZI2 227 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 HSPB7Q9UBY9 170 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 LHFPL6Q9Y693 200 aa9.06□□□□□ -0.96
LIG1-220ENST00000601091 PROB1E7EW31 1015 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 CORTO00230 105 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 IFNA1P01562 189 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 PMCHP20382 165 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 ACKR3P25106 362 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 CEACAM16Q2WEN9 425 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 SLC25A45Q8N413 288 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 IL22RA1Q8N6P7 574 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 OR2G3Q8NGZ4 309 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 GLMPQ8WWB7 406 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 CALHM2Q9HA72 323 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 ZNF586Q9NXT0 402 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 WNT16Q9UBV4 365 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 LPAR3Q9UBY5 353 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 ANXA10Q9UJ72 324 aa9.05□□□□□ -0.96
LIG1-220ENST00000601091 HEATR5AQ86XA9 2040 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms