RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 KCNIP1Q9NZI2 227 aa16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 TLN2Q9Y4G6 2542 aa16.36■□□□□ 0.21
SHKBP1-222ENST00000600320 C2CD3Q4AC94 2353 aa16.35■□□□□ 0.21
SHKBP1-222ENST00000600320 TRAV40A0A0B4J280 105 aa16.35■□□□□ 0.21
SHKBP1-222ENST00000600320 FAM172BPA6NC97 362 aa16.35■□□□□ 0.21
SHKBP1-222ENST00000600320 MEIS3P1A6NDR6 274 aa16.35■□□□□ 0.21
SHKBP1-222ENST00000600320 SCTP09683 121 aa16.35■□□□□ 0.21
SHKBP1-222ENST00000600320 IGHV4-38-2P0DP08 117 aa16.35■□□□□ 0.21
SHKBP1-222ENST00000600320 DTYMKP23919 212 aa16.35■□□□□ 0.21
SHKBP1-222ENST00000600320 COX7A1P24310 79 aa16.35■□□□□ 0.21
SHKBP1-222ENST00000600320 TRAT1Q6PIZ9 186 aa16.35■□□□□ 0.21
SHKBP1-222ENST00000600320 PRR18Q8N4B5 295 aa16.35■□□□□ 0.21
SHKBP1-222ENST00000600320 SOSTQ9BQB4 213 aa16.35■□□□□ 0.21
SHKBP1-222ENST00000600320 SUCNR1Q9BXA5 334 aa16.35■□□□□ 0.21
SHKBP1-222ENST00000600320 ANK3Q12955 4377 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 IGHV3-43A0A0B4J1X8 118 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 CENPVL3A0A0U1RRI6 287 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 hCG_1809904A0A1W2PP81 198 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 A0A1W2PPE2 198 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 A0A1W2PR64 198 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 A0A1W2PRV1 198 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 POM121CA8CG34 1229 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 INAFM1C9JVW0 142 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 F2RL2O00254 374 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 FCER2P06734 321 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 IGHV3-43DP0DP04 118 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 FPR2P25090 351 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 NFYBP25208 207 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 S100A5P33763 92 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 PRSS3P35030 304 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 RNASE12Q5GAN4 147 aaKnown RBP16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 ZNF554Q86TJ5 538 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 PNKDQ8N490 385 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 GVQW1Q8N7I0 195 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 ST6GALNAC5Q9BVH7 336 aa16.34■□□□□ 0.21
SHKBP1-222ENST00000600320 SETD2Q9BYW2 2564 aaPredicted RBP16.33■□□□□ 0.21
SHKBP1-222ENST00000600320 IGKV1-6A0A0C4DH72 117 aa16.33■□□□□ 0.2
SHKBP1-222ENST00000600320 A0A1W2PRD5 423 aa16.33■□□□□ 0.2
SHKBP1-222ENST00000600320 A0A1W2PRF3 423 aa16.33■□□□□ 0.2
SHKBP1-222ENST00000600320 A0A1W2PRM7 423 aa16.33■□□□□ 0.2
SHKBP1-222ENST00000600320 TRDCB7Z8K6 153 aa16.33■□□□□ 0.2
SHKBP1-222ENST00000600320 SPINT2O43291 252 aa16.33■□□□□ 0.2
SHKBP1-222ENST00000600320 GSTT2P0CG29 244 aa16.33■□□□□ 0.2
SHKBP1-222ENST00000600320 GSTT2BP0CG30 244 aa16.33■□□□□ 0.2
SHKBP1-222ENST00000600320 LOXL3P58215 753 aa16.33■□□□□ 0.2
SHKBP1-222ENST00000600320 RUSC1-AS1Q66K80 236 aa16.33■□□□□ 0.2
SHKBP1-222ENST00000600320 CCDC190Q86UF4 302 aa16.33■□□□□ 0.2
SHKBP1-222ENST00000600320 OR52L2PQ8NGH6 319 aa16.33■□□□□ 0.2
SHKBP1-222ENST00000600320 GPX8Q8TED1 209 aa16.33■□□□□ 0.2
SHKBP1-222ENST00000600320 LEAP2Q969E1 77 aa16.33■□□□□ 0.2
SHKBP1-222ENST00000600320 TMEM133Q9H2Q1 129 aa16.33■□□□□ 0.2
SHKBP1-222ENST00000600320 ZNF286AQ9HBT8 521 aa16.33■□□□□ 0.2
SHKBP1-222ENST00000600320 PTTG2Q9NZH5 202 aa16.33■□□□□ 0.2
SHKBP1-222ENST00000600320 MTORP42345 2549 aa16.33■□□□□ 0.2
SHKBP1-222ENST00000600320 SDCBPO00560 298 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 FABP7O15540 132 aa16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 TPPPO94811 219 aa16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 IGHV3-7P01780 117 aa16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 IL18Q14116 193 aa16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 GNMTQ14749 295 aa16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 HERPUD1Q15011 391 aa16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 SRSF7Q16629 238 aaKnown RBP eCLIP16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 NCR3LG1Q68D85 454 aa16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 PYHIN1Q6K0P9 492 aa16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 Q6ZS49 121 aa16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 HOGA1Q86XE5 327 aa16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 OR10A7Q8NGE5 316 aa16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 OCSTAMPQ9BR26 566 aa16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 GFOD1Q9NXC2 390 aa16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 ANAPC10Q9UM13 185 aa16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 MGAT4AQ9UM21 535 aa16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 SOX21Q9Y651 276 aaPredicted RBP16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 V9GYH0 126 aa16.32■□□□□ 0.2
SHKBP1-222ENST00000600320 A0A087X0M5 115 aa16.31■□□□□ 0.2
SHKBP1-222ENST00000600320 A0A1B0GX30 115 aa16.31■□□□□ 0.2
SHKBP1-222ENST00000600320 FABP12A6NFH5 140 aa16.31■□□□□ 0.2
SHKBP1-222ENST00000600320 CD34P28906 385 aa16.31■□□□□ 0.2
SHKBP1-222ENST00000600320 OR52W1Q6IF63 320 aa16.31■□□□□ 0.2
SHKBP1-222ENST00000600320 OR10V1Q8NGI7 309 aa16.31■□□□□ 0.2
SHKBP1-222ENST00000600320 OR52I2Q8NH67 350 aa16.31■□□□□ 0.2
SHKBP1-222ENST00000600320 NANPQ8TBE9 248 aa16.31■□□□□ 0.2
SHKBP1-222ENST00000600320 HEXA-AS1Q9H8Q6 139 aa16.31■□□□□ 0.2
SHKBP1-222ENST00000600320 ZNRD1Q9P1U0 126 aa16.31■□□□□ 0.2
SHKBP1-222ENST00000600320 ZFHX3Q15911 3703 aa16.31■□□□□ 0.2
SHKBP1-222ENST00000600320 IGHV2-26A0A0B4J1V2 119 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 IGHV1-69DA0A0B4J2H0 117 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 IGHV1-69P01742 117 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 LPLP06858 475 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 KIR2DS4P43632 304 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 DGCR2P98153 550 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 KIR2DS1Q14954 304 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 IGSF11Q5DX21 431 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 GPR157Q5UAW9 335 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 FAM131AQ6UXB0 335 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 BRD3OSQ6XYD6 125 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 ABHD12Q8N2K0 398 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 OR52M1Q8NGK5 317 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 OR4A4PQ8NGN8 299 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 OR13D1Q8NGV5 346 aa16.3■□□□□ 0.2
SHKBP1-222ENST00000600320 IL1F10Q8WWZ1 152 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms