RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 PRRX1P54821 245 aa12.3□□□□□ -0.44
GTF2F1-206ENST00000598607 PNLIPRP3Q17RR3 467 aa12.3□□□□□ -0.44
GTF2F1-206ENST00000598607 TUSC1Q2TAM9 212 aa12.3□□□□□ -0.44
GTF2F1-206ENST00000598607 CDNFQ49AH0 187 aa12.3□□□□□ -0.44
GTF2F1-206ENST00000598607 ZNF880Q6PDB4 577 aa12.3□□□□□ -0.44
GTF2F1-206ENST00000598607 ABHD12Q8N2K0 398 aa12.3□□□□□ -0.44
GTF2F1-206ENST00000598607 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
GTF2F1-206ENST00000598607 RFESDQ8TAC1 157 aa12.3□□□□□ -0.44
GTF2F1-206ENST00000598607 ZNF596Q8TC21 504 aa12.3□□□□□ -0.44
GTF2F1-206ENST00000598607 ZDHHC16Q969W1 377 aa12.3□□□□□ -0.44
GTF2F1-206ENST00000598607 COMMD3Q9UBI1 195 aa12.3□□□□□ -0.44
GTF2F1-206ENST00000598607 KCNK7Q9Y2U2 307 aa12.3□□□□□ -0.44
GTF2F1-206ENST00000598607 NIPBLQ6KC79 2804 aaeCLIP12.3□□□□□ -0.44
GTF2F1-206ENST00000598607 MXRA5Q9NR99 2828 aa12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 ODF3BA8MYP8 253 aa12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 SDCBPO00560 298 aaPredicted RBP12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 TOR1AO14656 332 aa12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 HBZP02008 142 aa12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 TALDO1P37837 337 aa12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 PITPNAQ00169 270 aa12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 HMGN3Q15651 99 aa12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 LTC4SQ16873 150 aa12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 Q3ZCU0 254 aa12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 OLFML2AQ68BL7 652 aa12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 PRR18Q8N4B5 295 aa12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 OR9G1Q8NH87 305 aa12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 CREB3L1Q96BA8 519 aa12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 CYYR1Q96J86 154 aa12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 HDHD3Q9BSH5 251 aaPredicted RBP12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 PRDM13Q9H4Q3 707 aa12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 ZMAT3Q9HA38 289 aaKnown RBP12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 ZNF286AQ9HBT8 521 aa12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 CCDC59Q9P031 241 aaKnown RBP12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 C2CD3Q4AC94 2353 aa12.29□□□□□ -0.44
GTF2F1-206ENST00000598607 TRAV18A0A075B6X5 111 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 A0A0U1RQK1 487 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 ZNF701M0R085 212 aaPredicted RBP12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 APOA1P02647 267 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 GNG2P59768 71 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 HILS1P60008 231 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 HLA-DRB3P79483 266 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 HTD2P86397 168 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 DEFB112Q30KQ8 113 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 ZNF260Q3ZCT1 412 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 MINOS1Q5TGZ0 78 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 HACD4Q5VWC8 232 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 SIGLECL1Q8N7X8 197 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 BEND2Q8NDZ0 799 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 DYNC2LI1Q8TCX1 351 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 GALMQ96C23 342 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 ZNF48Q96MX3 618 aaPredicted RBP12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 RBM38Q9H0Z9 239 aaKnown RBP12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 Q9N2K0 584 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 GFOD1Q9NXC2 390 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 NDUFA13Q9P0J0 144 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 RSL24D1Q9UHA3 163 aaKnown RBP12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 AMMECR1Q9Y4X0 333 aaPredicted RBP12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 MINOS1-NBL1R4GNA1 71 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 SVEP1Q4LDE5 3571 aa12.28□□□□□ -0.44
GTF2F1-206ENST00000598607 SETD2Q9BYW2 2564 aaPredicted RBP12.27□□□□□ -0.44
GTF2F1-206ENST00000598607 SMIM31A0A1B0GVY4 71 aa12.27□□□□□ -0.45
GTF2F1-206ENST00000598607 FAM172BPA6NC97 362 aa12.27□□□□□ -0.45
GTF2F1-206ENST00000598607 XRCC3O43542 346 aa12.27□□□□□ -0.45
GTF2F1-206ENST00000598607 FCGR3AP08637 254 aa12.27□□□□□ -0.45
GTF2F1-206ENST00000598607 DTYMKP23919 212 aa12.27□□□□□ -0.45
GTF2F1-206ENST00000598607 HTR1DP28221 377 aa12.27□□□□□ -0.45
GTF2F1-206ENST00000598607 MNDAP41218 407 aa12.27□□□□□ -0.45
GTF2F1-206ENST00000598607 KIR2DS4P43632 304 aa12.27□□□□□ -0.45
GTF2F1-206ENST00000598607 KIR2DS1Q14954 304 aa12.27□□□□□ -0.45
GTF2F1-206ENST00000598607 SRSF7Q16629 238 aaKnown RBP eCLIP12.27□□□□□ -0.45
GTF2F1-206ENST00000598607 BAIAP2L2Q6UXY1 529 aa12.27□□□□□ -0.45
GTF2F1-206ENST00000598607 OR1L1Q8NH94 360 aa12.27□□□□□ -0.45
GTF2F1-206ENST00000598607 UBALD1Q8TB05 177 aa12.27□□□□□ -0.45
GTF2F1-206ENST00000598607 MALSU1Q96EH3 234 aa12.27□□□□□ -0.45
GTF2F1-206ENST00000598607 GNG12Q9UBI6 72 aa12.27□□□□□ -0.45
GTF2F1-206ENST00000598607 JPT1Q9UK76 154 aa12.27□□□□□ -0.45
GTF2F1-206ENST00000598607 SOX21Q9Y651 276 aaPredicted RBP12.27□□□□□ -0.45
GTF2F1-206ENST00000598607 MDFIC2A0A1B0GVS7 189 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 TMEM235A6NFC5 223 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 J3QR06 171 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 RGS11O94810 467 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 IGLV1-47P01700 117 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 CEACAM3P40198 252 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 LOXL3P58215 753 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 BAMBIQ13145 260 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 HLA-DRB5Q30154 266 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 TMEM69Q5SWH9 247 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 STEAP3Q658P3 488 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 Q6YL49 198 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 Q6ZPA2 131 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 LDLRAD3Q86YD5 345 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 C8orf31Q8N9H6 132 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 OR4P4Q8NGL7 312 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 MMP28Q9H239 520 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 OR2S2Q9NQN1 319 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 ZNRD1Q9P1U0 126 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 ADAM30Q9UKF2 790 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 PSG11Q9UQ72 335 aa12.26□□□□□ -0.45
GTF2F1-206ENST00000598607 IGHV3-43A0A0B4J1X8 118 aa12.25□□□□□ -0.45
GTF2F1-206ENST00000598607 LEUTXA8MZ59 168 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms