RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 TMEM158Q8WZ71 300 aa11.49□□□□□ -0.57
SHKBP1-217ENST00000598558 JMJD8Q96S16 334 aa11.49□□□□□ -0.57
SHKBP1-217ENST00000598558 TAF9BQ9HBM6 251 aa11.49□□□□□ -0.57
SHKBP1-217ENST00000598558 PSG11Q9UQ72 335 aa11.49□□□□□ -0.57
SHKBP1-217ENST00000598558 LY6LH3BQJ8 138 aa11.48□□□□□ -0.57
SHKBP1-217ENST00000598558 TRIM77I1YAP6 450 aa11.48□□□□□ -0.57
SHKBP1-217ENST00000598558 F2RL2O00254 374 aa11.48□□□□□ -0.57
SHKBP1-217ENST00000598558 RNASE1P07998 156 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-217ENST00000598558 LGALS4P56470 323 aa11.48□□□□□ -0.57
SHKBP1-217ENST00000598558 DIAPH2-AS1Q14236 149 aa11.48□□□□□ -0.57
SHKBP1-217ENST00000598558 SSX2Q16385 188 aa11.48□□□□□ -0.57
SHKBP1-217ENST00000598558 PLA1AQ53H76 456 aa11.48□□□□□ -0.57
SHKBP1-217ENST00000598558 FBLN7Q53RD9 439 aa11.48□□□□□ -0.57
SHKBP1-217ENST00000598558 OR56B1Q8NGI3 324 aa11.48□□□□□ -0.57
SHKBP1-217ENST00000598558 OR10R2Q8NGX6 335 aa11.48□□□□□ -0.57
SHKBP1-217ENST00000598558 FAM216AQ8WUB2 273 aa11.48□□□□□ -0.57
SHKBP1-217ENST00000598558 PTX4Q96A99 478 aa11.48□□□□□ -0.57
SHKBP1-217ENST00000598558 SLC25A38Q96DW6 304 aa11.48□□□□□ -0.57
SHKBP1-217ENST00000598558 ZMAT3Q9HA38 289 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-217ENST00000598558 TBL2Q9Y4P3 447 aaKnown RBP11.48□□□□□ -0.57
SHKBP1-217ENST00000598558 HILPDAQ9Y5L2 63 aa11.48□□□□□ -0.57
SHKBP1-217ENST00000598558 H3BUI4 141 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 J3QR06 171 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 MFNGO00587 321 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 SLC31A2O15432 143 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 GABARAPO95166 117 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 GNB3P16520 340 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 ZNF134P52741 427 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 GNMTQ14749 295 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 HLA-DRB5Q30154 266 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 C16orf87Q6PH81 154 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 PRR18Q8N4B5 295 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 OR10A7Q8NGE5 316 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 OR52L2PQ8NGH6 319 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 ZFAND2BQ8WV99 257 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 SSMEM1Q8WWF3 244 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 RAB3CQ96E17 227 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 MALSU1Q96EH3 234 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 SSX3Q99909 188 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 ATG5Q9H1Y0 275 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 GFOD1Q9NXC2 390 aa11.47□□□□□ -0.57
SHKBP1-217ENST00000598558 TRBV6-6A0A0A6YYG2 114 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 FAM181BA6NEQ2 426 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 BUB1B-PAK6H3BSN5 160 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 H3BUX3 64 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 SDCBPO00560 298 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 SERPINB10P48595 397 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 GNG10P50151 68 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 RELBQ01201 579 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 HMGN3Q15651 99 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 C6orf183Q5T699 404 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 MINOS1Q5TGZ0 78 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 CCBE1Q6UXH8 406 aaPredicted RBP11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 TMEM86BQ8N661 226 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 ZNF439Q8NDP4 499 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 OR10V1Q8NGI7 309 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 OR52M1Q8NGK5 317 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 OR9G1Q8NH87 305 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 NDNFQ8TB73 568 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 DPM3Q9P2X0 92 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 POMT1Q9Y6A1 747 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 MINOS1-NBL1R4GNA1 71 aa11.46□□□□□ -0.57
SHKBP1-217ENST00000598558 DNHD1Q96M86 4753 aa11.46□□□□□ -0.58
SHKBP1-217ENST00000598558 KIAA2026Q5HYC2 2103 aa11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 A0A075B6Q4 140 aa11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 TOR1AO14656 332 aa11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 GPR137BO60478 399 aa11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 HIST1H1DP16402 221 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 HTR1DP28221 377 aa11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 FAM189A2Q15884 450 aa11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 LY6EQ16553 131 aa11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 CDNFQ49AH0 187 aa11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 CT45A1Q5HYN5 189 aa11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 GPR141Q7Z602 305 aa11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 CT45A3Q8NHU0 189 aa11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 SETD6Q8TBK2 473 aa11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 ZNF596Q8TC21 504 aa11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 SLC25A46Q96AG3 418 aa11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 RBMXL1Q96E39 390 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 CMSS1Q9BQ75 279 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 PARP12Q9H0J9 701 aaKnown RBP11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 MMP28Q9H239 520 aa11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 CHMP1AQ9HD42 196 aaPredicted RBP11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 Q9N2K0 584 aa11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 RHBDL2Q9NX52 303 aa11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 COL6A5A8TX70 2615 aa11.45□□□□□ -0.58
SHKBP1-217ENST00000598558 IGKV1-6A0A0C4DH72 117 aa11.44□□□□□ -0.58
SHKBP1-217ENST00000598558 TMEM89A2RUT3 159 aa11.44□□□□□ -0.58
SHKBP1-217ENST00000598558 METTL21EPA6NDL7 271 aa11.44□□□□□ -0.58
SHKBP1-217ENST00000598558 VGLL3A8MV65 326 aa11.44□□□□□ -0.58
SHKBP1-217ENST00000598558 SPINT2O43291 252 aa11.44□□□□□ -0.58
SHKBP1-217ENST00000598558 SCTP09683 121 aa11.44□□□□□ -0.58
SHKBP1-217ENST00000598558 CD24P25063 80 aa11.44□□□□□ -0.58
SHKBP1-217ENST00000598558 PPP1CCP36873 323 aaKnown RBP11.44□□□□□ -0.58
SHKBP1-217ENST00000598558 RANBP1P43487 201 aa11.44□□□□□ -0.58
SHKBP1-217ENST00000598558 PRRX1P54821 245 aa11.44□□□□□ -0.58
SHKBP1-217ENST00000598558 LRRC75BQ2VPJ9 315 aa11.44□□□□□ -0.58
SHKBP1-217ENST00000598558 ZNF260Q3ZCT1 412 aa11.44□□□□□ -0.58
SHKBP1-217ENST00000598558 TPTE2P1Q5T6R2 138 aa11.44□□□□□ -0.58
SHKBP1-217ENST00000598558 IZUMO1Q8IYV9 350 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms