RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 ARG1P05089 322 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 FBP1P09467 338 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 LGALS4P56470 323 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 LOXL3P58215 753 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 HMGN3Q15651 99 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 Q3ZCU0 254 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 MINOS1Q5TGZ0 78 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 OLFML2AQ68BL7 652 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 Q6ZPA2 131 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 BEND2Q8NDZ0 799 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 ACOT12Q8WYK0 555 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 CMTM3Q96MX0 182 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 CMSS1Q9BQ75 279 aaKnown RBP16.51■□□□□ 0.23
PNKP-211ENST00000598020 MEGF9Q9H1U4 602 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 TAF9BQ9HBM6 251 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 ZNF286AQ9HBT8 521 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 MGAT4AQ9UM21 535 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 MINOS1-NBL1R4GNA1 71 aa16.51■□□□□ 0.23
PNKP-211ENST00000598020 MDFIC2A0A1B0GVS7 189 aa16.5■□□□□ 0.23
PNKP-211ENST00000598020 CLDN34H7C241 214 aa16.5■□□□□ 0.23
PNKP-211ENST00000598020 VENTXO95231 258 aa16.5■□□□□ 0.23
PNKP-211ENST00000598020 HBZP02008 142 aa16.5■□□□□ 0.23
PNKP-211ENST00000598020 GNB3P16520 340 aa16.5■□□□□ 0.23
PNKP-211ENST00000598020 NFYBP25208 207 aa16.5■□□□□ 0.23
PNKP-211ENST00000598020 ZDHHC22Q8N966 263 aa16.5■□□□□ 0.23
PNKP-211ENST00000598020 OR9G1Q8NH87 305 aa16.5■□□□□ 0.23
PNKP-211ENST00000598020 ZNF596Q8TC21 504 aa16.5■□□□□ 0.23
PNKP-211ENST00000598020 ZDHHC16Q969W1 377 aa16.5■□□□□ 0.23
PNKP-211ENST00000598020 MALSU1Q96EH3 234 aa16.5■□□□□ 0.23
PNKP-211ENST00000598020 HDHD3Q9BSH5 251 aaPredicted RBP16.5■□□□□ 0.23
PNKP-211ENST00000598020 CHMP1AQ9HD42 196 aaPredicted RBP16.5■□□□□ 0.23
PNKP-211ENST00000598020 MELTFP08582 738 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 GSTP1P09211 210 aaKnown RBP16.49■□□□□ 0.23
PNKP-211ENST00000598020 CD3GP09693 182 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 ZNF182P17025 639 aaPredicted RBP16.49■□□□□ 0.23
PNKP-211ENST00000598020 PRRX1P54821 245 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 HTD2P86397 168 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 SPCS2Q15005 226 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 CDNFQ49AH0 187 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 UBE2NLQ5JXB2 153 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 UTF1Q5T230 341 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 TMEM86BQ8N661 226 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 C8orf31Q8N9H6 132 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 OR4P4Q8NGL7 312 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 OR1L1Q8NH94 360 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 ZFAND2BQ8WV99 257 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 C17orf50Q8WW18 174 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 ZMAT3Q9HA38 289 aaKnown RBP16.49■□□□□ 0.23
PNKP-211ENST00000598020 Q9N2K0 584 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 ESM1Q9NQ30 184 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 GFOD1Q9NXC2 390 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 ZNRD1Q9P1U0 126 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 CEPT1Q9Y6K0 416 aa16.49■□□□□ 0.23
PNKP-211ENST00000598020 SDCBPO00560 298 aaPredicted RBP16.48■□□□□ 0.23
PNKP-211ENST00000598020 BAMBIQ13145 260 aa16.48■□□□□ 0.23
PNKP-211ENST00000598020 AANATQ16613 207 aa16.48■□□□□ 0.23
PNKP-211ENST00000598020 HLA-DRB5Q30154 266 aa16.48■□□□□ 0.23
PNKP-211ENST00000598020 ZNF260Q3ZCT1 412 aa16.48■□□□□ 0.23
PNKP-211ENST00000598020 LDLRAD2Q5SZI1 272 aa16.48■□□□□ 0.23
PNKP-211ENST00000598020 LHFPL4Q7Z7J7 247 aa16.48■□□□□ 0.23
PNKP-211ENST00000598020 AP3S1Q92572 193 aa16.48■□□□□ 0.23
PNKP-211ENST00000598020 CREB3L1Q96BA8 519 aa16.48■□□□□ 0.23
PNKP-211ENST00000598020 PHF21AQ96BD5 680 aa16.48■□□□□ 0.23
PNKP-211ENST00000598020 ISOC1Q96CN7 298 aa16.48■□□□□ 0.23
PNKP-211ENST00000598020 DIABLOQ9NR28 239 aa16.48■□□□□ 0.23
PNKP-211ENST00000598020 PSG11Q9UQ72 335 aa16.48■□□□□ 0.23
PNKP-211ENST00000598020 POMT1Q9Y6A1 747 aa16.48■□□□□ 0.23
PNKP-211ENST00000598020 A0A075B6Q4 140 aa16.47■□□□□ 0.23
PNKP-211ENST00000598020 FAM172BPA6NC97 362 aa16.47■□□□□ 0.23
PNKP-211ENST00000598020 H3BMQ9 156 aa16.47■□□□□ 0.23
PNKP-211ENST00000598020 J3QR06 171 aa16.47■□□□□ 0.23
PNKP-211ENST00000598020 TOR1AO14656 332 aa16.47■□□□□ 0.23
PNKP-211ENST00000598020 NOL3O60936 208 aaKnown RBP16.47■□□□□ 0.23
PNKP-211ENST00000598020 HTR1DP28221 377 aa16.47■□□□□ 0.23
PNKP-211ENST00000598020 IER3P46695 156 aa16.47■□□□□ 0.23
PNKP-211ENST00000598020 MRPS15P82914 257 aaKnown RBP16.47■□□□□ 0.23
PNKP-211ENST00000598020 SRSF7Q16629 238 aaKnown RBP eCLIP16.47■□□□□ 0.23
PNKP-211ENST00000598020 LTC4SQ16873 150 aa16.47■□□□□ 0.23
PNKP-211ENST00000598020 PNLIPRP3Q17RR3 467 aa16.47■□□□□ 0.23
PNKP-211ENST00000598020 LY6G6FQ5SQ64 297 aa16.47■□□□□ 0.23
PNKP-211ENST00000598020 HACD4Q5VWC8 232 aa16.47■□□□□ 0.23
PNKP-211ENST00000598020 LINC00311Q8N616 119 aa16.47■□□□□ 0.23
PNKP-211ENST00000598020 SAMD12Q8N8I0 201 aa16.47■□□□□ 0.23
PNKP-211ENST00000598020 UBALD1Q8TB05 177 aa16.47■□□□□ 0.23
PNKP-211ENST00000598020 SSMEM1Q8WWF3 244 aa16.47■□□□□ 0.23
PNKP-211ENST00000598020 GALMQ96C23 342 aa16.47■□□□□ 0.23
PNKP-211ENST00000598020 S100A16Q96FQ6 103 aaKnown RBP16.47■□□□□ 0.23
PNKP-211ENST00000598020 DPM3Q9P2X0 92 aa16.47■□□□□ 0.23
PNKP-211ENST00000598020 DNAJC9-AS1A6NH13 148 aa16.46■□□□□ 0.23
PNKP-211ENST00000598020 XRCC3O43542 346 aa16.46■□□□□ 0.23
PNKP-211ENST00000598020 PITPNAQ00169 270 aa16.46■□□□□ 0.23
PNKP-211ENST00000598020 SLC9A3R2Q15599 337 aa16.46■□□□□ 0.23
PNKP-211ENST00000598020 STEAP3Q658P3 488 aa16.46■□□□□ 0.23
PNKP-211ENST00000598020 Q6ZS49 121 aa16.46■□□□□ 0.23
PNKP-211ENST00000598020 PRR18Q8N4B5 295 aa16.46■□□□□ 0.23
PNKP-211ENST00000598020 MMP28Q9H239 520 aa16.46■□□□□ 0.23
PNKP-211ENST00000598020 JPT1Q9UK76 154 aa16.46■□□□□ 0.23
PNKP-211ENST00000598020 VGLL3A8MV65 326 aa16.45■□□□□ 0.22
PNKP-211ENST00000598020 LEUTXA8MZ59 168 aa16.45■□□□□ 0.22
PNKP-211ENST00000598020 LY6LH3BQJ8 138 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms